Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5IW7
DownloadVisualize
BU of 5iw7 by Molmil
Crystal structure of yeast Tsr1, a pre-40S ribosome synthesis factor
Descriptor: Ribosome biogenesis protein TSR1,Ribosome biogenesis protein TSR1
Authors:McCaughan, U.M, Jayachandran, U, Cook, A.G.
Deposit date:2016-03-22
Release date:2016-06-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Pre-40S ribosome biogenesis factor Tsr1 is an inactive structural mimic of translational GTPases.
Nat Commun, 7, 2016
1SGH
DownloadVisualize
BU of 1sgh by Molmil
Moesin FERM domain bound to EBP50 C-terminal peptide
Descriptor: Ezrin-radixin-moesin binding phosphoprotein 50, Moesin
Authors:Finnerty, C.M, Chambers, D, Ingraffea, J, Faber, H.R, Karplus, P.A, Bretscher, A.
Deposit date:2004-02-23
Release date:2004-06-29
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:The EBP50-moesin interaction involves a binding site regulated by direct masking on the FERM domain
J.Cell.Sci., 117, 2004
1SJJ
DownloadVisualize
BU of 1sjj by Molmil
Cryo-EM Structure of Chicken Gizzard Smooth Muscle alpha-Actinin
Descriptor: actinin
Authors:Liu, J, Taylor, D.W, Taylor, K.A.
Deposit date:2004-03-03
Release date:2004-03-23
Last modified:2024-02-14
Method:ELECTRON CRYSTALLOGRAPHY (20 Å)
Cite:A 3-D Reconstruction of Smooth Muscle alpha-Actinin by CryoEm Reveals Two Different Conformations at the Actin-binding Region.
J.Mol.Biol., 338, 2004
1SHI
DownloadVisualize
BU of 1shi by Molmil
REFINED STRUCTURE IN SOLUTION OF THE SEA ANEMONE NEUROTOXIN SHI
Descriptor: NEUROTOXIN I
Authors:Pallaghy, P.K, Dyke, T.R, Norton, R.S.
Deposit date:1994-12-07
Release date:1995-02-07
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Refined structure in solution of the sea anemone neurotoxin ShI.
J.Biol.Chem., 268, 1993
1SI9
DownloadVisualize
BU of 1si9 by Molmil
Boiling stable protein isolated from Populus tremula
Descriptor: GLYCEROL, stable protein 1
Authors:Almog, O, Gonzales, A, Shoseyov, O, Dgany, O, Sofer, O, Wolf, S.G.
Deposit date:2004-02-29
Release date:2004-09-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:The Structural Basis of the Thermostability of SP1, a Novel Plant (Populus tremula) Boiling Stable Protein.
J.Biol.Chem., 279, 2004
5I8M
DownloadVisualize
BU of 5i8m by Molmil
Bicyclic antimibrocial peptides
Descriptor: 3,7-anhydro-2,8-dideoxy-L-glycero-D-gluco-octonic acid, CALCIUM ION, DLS-LYS-CYS-LYS-LEU-CYS-LEU-LYS-NH2, ...
Authors:Di Bonaventura, I, Jin, X, Visini, R, Michaud, G, Robadey, M, Koehler, T, van Delden, C, Stocker, A, Darbre, T, Reymond, J.-L.
Deposit date:2016-02-19
Release date:2017-08-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Chemical space guided discovery of antimicrobial bridged bicyclic peptides against Pseudomonas aeruginosa and its biofilms.
Chem Sci, 8, 2017
5I90
DownloadVisualize
BU of 5i90 by Molmil
Crystal Structure of PvdN from Pseudomonas Aeruginosa
Descriptor: 1,2-ETHANEDIOL, PYRIDOXAL-5'-PHOSPHATE, PvdN
Authors:Drake, E.J, Gulick, A.M.
Deposit date:2016-02-19
Release date:2016-05-11
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.219 Å)
Cite:1.2 angstrom resolution crystal structure of the periplasmic aminotransferase PvdN from Pseudomonas aeruginosa.
Acta Crystallogr F Struct Biol Commun, 72, 2016
5IJ8
DownloadVisualize
BU of 5ij8 by Molmil
Structure of the primary oncogenic mutant Y641N Hs/AcPRC2 in complex with a pyridone inhibitor
Descriptor: 5,8-dichloro-2-[(4-ethyl-6-methyl-2-oxo-1,2-dihydropyridin-3-yl)methyl]-7-({1-[(2R)-2-hydroxypropanoyl]piperidin-4-yl}oxy)-3,4-dihydroisoquinolin-1(2H)-one, Enhancer of Zeste Homolog 2 (EZH2),Histone-lysine N-methyltransferase EZH2, Polycomb protein EED, ...
Authors:Gajiwala, K.S, Brooun, A, Deng, Y.-L, Liu, W.
Deposit date:2016-03-01
Release date:2016-05-04
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:Polycomb repressive complex 2 structure with inhibitor reveals a mechanism of activation and drug resistance.
Nat Commun, 7, 2016
1RWT
DownloadVisualize
BU of 1rwt by Molmil
Crystal Structure of Spinach Major Light-harvesting complex at 2.72 Angstrom Resolution
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Liu, Z, Yan, H, Wang, K, Kuang, T, Zhang, J, Gui, L, An, X, Chang, W.
Deposit date:2003-12-17
Release date:2004-03-30
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Crystal structure of spinach major light-harvesting complex at 2.72 A resolution
Nature, 428, 2004
5IA0
DownloadVisualize
BU of 5ia0 by Molmil
Crystal Structure of Ephrin A2 (EphA2) Receptor Protein Kinase with alisertib (MLN8237)
Descriptor: 1,2-ETHANEDIOL, Ephrin type-A receptor 2, alisertib
Authors:Kudlinzki, D, Linhard, V.L, Gande, S.L, Sreeramulu, S, Saxena, K, Heinzlmeir, S, Medard, G, Kuester, B, Schwalbe, H.
Deposit date:2016-02-21
Release date:2016-11-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.948 Å)
Cite:Chemical Proteomics and Structural Biology Define EPHA2 Inhibition by Clinical Kinase Drugs.
ACS Chem. Biol., 11, 2016
5IKN
DownloadVisualize
BU of 5ikn by Molmil
Crystal Structure of the T7 Replisome in the Absence of DNA
Descriptor: DNA primase/helicase, DNA-directed DNA polymerase, Thioredoxin-1
Authors:Wallen, J.R, Ellenberger, T.
Deposit date:2016-03-03
Release date:2016-12-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (4.802 Å)
Cite:Hybrid Methods Reveal Multiple Flexibly Linked DNA Polymerases within the Bacteriophage T7 Replisome.
Structure, 25, 2017
5IB1
DownloadVisualize
BU of 5ib1 by Molmil
Crystal structure of HLA-B*27:05 complexed with the self-peptide pVIPR measured at 295 K
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, B-27 alpha chain, ...
Authors:Janke, R, Ballaschk, M, Schmieder, P, Uchanska-Ziegler, B, Ziegler, A, Loll, B.
Deposit date:2016-02-22
Release date:2017-02-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Metal-triggered conformational reorientation of a self-peptide bound to a disease-associated HLA-B*27 subtype.
J.Biol.Chem., 2019
5IBD
DownloadVisualize
BU of 5ibd by Molmil
Crystal structure Mycobacterium tuberculosis CYP121 in complex with inhibitor fragment 24a
Descriptor: 4-(3'-amino[1,1'-biphenyl]-3-yl)-3-(4-methoxyphenyl)-1H-pyrazol-5-amine, Mycocyclosin synthase, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Levy, C.
Deposit date:2016-02-22
Release date:2016-04-06
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Fragment-Based Approaches to the Development of Mycobacterium tuberculosis CYP121 Inhibitors.
J.Med.Chem., 59, 2016
1RZE
DownloadVisualize
BU of 1rze by Molmil
X-RAY ANALYSIS OF METAL SUBSTITUTED HUMAN CARBONIC ANHYDRASE II DERIVATIVES
Descriptor: CARBONIC ANHYDRASE II, NICKEL (II) ION, SULFATE ION
Authors:Hakansson, K, Wehnert, A, Liljas, A.
Deposit date:1993-05-25
Release date:1993-10-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:X-ray analysis of metal-substituted human carbonic anhydrase II derivatives.
Acta Crystallogr.,Sect.D, 50, 1994
5ID7
DownloadVisualize
BU of 5id7 by Molmil
Crystal structure of human serum albumin in complex with phosphorodithioate derivative of myristoyl cyclic phosphatidic acid (cPA)
Descriptor: (4S)-2-sulfanylidene-4-[(tetradecanoyloxy)methyl]-1,3,2lambda~5~-dioxaphospholane-2-thiolate, DI(HYDROXYETHYL)ETHER, Serum albumin, ...
Authors:Sekula, B, Bujacz, A, Rytczak, P, Bujacz, G.
Deposit date:2016-02-24
Release date:2016-05-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Structural evidence of the species-dependent albumin binding of the modified cyclic phosphatidic acid with cytotoxic properties.
Biosci.Rep., 36, 2016
5IDU
DownloadVisualize
BU of 5idu by Molmil
Crystal structure of an acyl-CoA dehydrogenase domain protein from Burkholderia phymatum bound to FAD
Descriptor: 1,2-ETHANEDIOL, Acyl-CoA dehydrogenase domain protein, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID), Edwards, T.E.
Deposit date:2016-02-24
Release date:2016-03-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of an acyl-CoA dehydrogenase domain protein from Burkholderia phymatum bound to FAD
To Be Published
1RZB
DownloadVisualize
BU of 1rzb by Molmil
X-RAY ANALYSIS OF METAL SUBSTITUTED HUMAN CARBONIC ANHYDRASE II DERIVATIVES
Descriptor: CARBONIC ANHYDRASE II, COBALT (II) ION, SULFATE ION
Authors:Hakansson, K, Wehnert, A, Liljas, A.
Deposit date:1993-05-25
Release date:1993-10-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray analysis of metal-substituted human carbonic anhydrase II derivatives.
Acta Crystallogr.,Sect.D, 50, 1994
1SL2
DownloadVisualize
BU of 1sl2 by Molmil
Ternary 5' complex of T7 DNA polymerase with a DNA primer/template containing a cis-syn thymine dimer on the template and an incoming nucleotide
Descriptor: 2',3'-DIDEOXYADENOSINE-5'-TRIPHOSPHATE, 5'-D(*CP*CP*CP*(TTD)P*AP*GP*GP*CP*AP*CP*TP*GP*GP*CP*CP*GP*TP*CP*GP*TP*TP*TP*TP*CP*G)-3', 5'-D(*CP*GP*AP*AP*AP*AP*CP*GP*AP*CP*GP*GP*CP*CP*AP*GP*TP*GP*CP*CP*TP*(2DA))-3', ...
Authors:Li, Y, Dutta, S, Doublie, S, Bdour, H.M, Taylor, J.S, Ellenberger, T.
Deposit date:2004-03-05
Release date:2004-07-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Nucleotide insertion opposite a cis-syn thymine dimer by a replicative DNA polymerase from bacteriophage T7.
Nat.Struct.Mol.Biol., 11, 2004
5IFE
DownloadVisualize
BU of 5ife by Molmil
Crystal structure of the human SF3b core complex
Descriptor: PHD finger-like domain-containing protein 5A, POTASSIUM ION, Splicing factor 3B subunit 1, ...
Authors:Cretu, C, Dybkov, O, De Laurentiis, E, Will, C.L, Luhrmann, R, Pena, V.
Deposit date:2016-02-25
Release date:2016-10-26
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Molecular Architecture of SF3b and Structural Consequences of Its Cancer-Related Mutations.
Mol.Cell, 64, 2016
1S02
DownloadVisualize
BU of 1s02 by Molmil
EFFECTS OF ENGINEERED SALT BRIDGES ON THE STABILITY OF SUBTILISIN BPN'
Descriptor: CALCIUM ION, SUBTILISIN BPN', SULFATE ION
Authors:Erwin, C.R, Barnett, B.L, Oliver, J.D, Sullivan, J.F.
Deposit date:1991-02-20
Release date:1992-01-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Effects of engineered salt bridges on the stability of subtilisin BPN'.
Protein Eng., 4, 1990
1KI6
DownloadVisualize
BU of 1ki6 by Molmil
CRYSTAL STRUCTURE OF THYMIDINE KINASE FROM HERPES SIMPLEX VIRUS TYPE I COMPLEXED WITH A 5-IODOURACIL ANHYDROHEXITOL NUCLEOSIDE
Descriptor: 1',5'-ANHYDRO-2',3'-DIDEOXY-2'-(5-IODOURACIL-1-YL)-D-ABABINO-HEXITOL, SULFATE ION, THYMIDINE KINASE
Authors:Champness, J.N, Bennett, M.S, Wien, F, Herdewijn, P, Ostrowski, T, Summers, W.C, Sanderson, M.R.
Deposit date:1998-05-18
Release date:1998-12-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Exploring the active site of herpes simplex virus type-1 thymidine kinase by X-ray crystallography of complexes with aciclovir and other ligands.
Proteins, 32, 1998
1S4E
DownloadVisualize
BU of 1s4e by Molmil
Pyrococcus furiosus galactokinase in complex with galactose, ADP and magnesium
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Galactokinase, MAGNESIUM ION, ...
Authors:Hartley, A, Glynn, S.E, Barynin, V, Baker, P.J, Sedelnikova, S.E, Verhees, C, de Geus, D, van der Oost, J, Timson, D.J, Reece, R.J, Rice, D.W.
Deposit date:2004-01-16
Release date:2004-04-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Substrate specificity and mechanism from the structure of Pyrococcus furiosus galactokinase
J.Mol.Biol., 337, 2004
5IJI
DownloadVisualize
BU of 5iji by Molmil
Fragment of nitrate/nitrite sensor histidine kinase NarQ (WT) in symmetric holo state
Descriptor: EICOSANE, NITRATE ION, Nitrate/nitrite sensor histidine kinase NarQ
Authors:Gushchin, I, Melnikov, I, Polovinkin, V, Ishchenko, A, Popov, A, Gordeliy, V.
Deposit date:2016-03-02
Release date:2017-05-31
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Mechanism of transmembrane signaling by sensor histidine kinases.
Science, 356, 2017
1KT2
DownloadVisualize
BU of 1kt2 by Molmil
CRYSTAL STRUCTURE OF CLASS II MHC MOLECULE IEK BOUND TO MOTH CYTOCHROME C PEPTIDE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fusion protein consisting of cytochrome C peptide, ...
Authors:Fremont, D.H, Dai, S, Chiang, H, Crawford, F, Marrack, P, Kappler, J.
Deposit date:2002-01-15
Release date:2002-05-01
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis of cytochrome c presentation by IE(k).
J.Exp.Med., 195, 2002
5ISZ
DownloadVisualize
BU of 5isz by Molmil
Crystal structure of LS01-TCR/M1-HLA-A*02 complex
Descriptor: Beta-2-microglobulin, GLYCEROL, HLA class I histocompatibility antigen, ...
Authors:Stern, L.J, Selin, L.K, Song, I.
Deposit date:2016-03-15
Release date:2017-03-01
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Broad TCR repertoire and diverse structural solutions for recognition of an immunodominant CD8(+) T cell epitope.
Nat. Struct. Mol. Biol., 24, 2017

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon