Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4GX7
DownloadVisualize
BU of 4gx7 by Molmil
Vibrio Cholerae Cytolysin Beta-Prism Domain With Methyl-Alpha-Mannose Bound
Descriptor: Cytolysin and hemolysin HlyA Pore-forming toxin, methyl alpha-D-mannopyranoside
Authors:Levan, S, Olson, R.
Deposit date:2012-09-04
Release date:2013-01-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Vibrio cholerae Cytolysin Recognizes the Heptasaccharide Core of Complex N-Glycans with Nanomolar Affinity.
J.Mol.Biol., 425, 2013
5TS8
DownloadVisualize
BU of 5ts8 by Molmil
Z. MAYS CK2 KINASE ALPHA SUBUNIT IN COMPLEX WITH THE ATP-COMPETITIVE INHIBITOR 5,6-DIBROMOBENZOTRIAZOLE
Descriptor: 1,2-ETHANEDIOL, 5,6-DIBROMOBENZOTRIAZOLE, ACETATE ION, ...
Authors:Winiewska, M, Kucinska, K, Czapinska, H, Piasecka, A, Bochtler, M, Poznanski, J.
Deposit date:2016-10-28
Release date:2018-01-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:STRUCTURAL AND THERMODYNAMIC ANALYSIS OF 5,6-DIBROMOBENZOTRIAZOLE BINDING TO CASEIN KINASE 2 ALPHA
To Be Published
2NU7
DownloadVisualize
BU of 2nu7 by Molmil
C123aS Mutant of E. coli Succinyl-CoA Synthetase
Descriptor: COENZYME A, PHOSPHATE ION, SULFATE ION, ...
Authors:Fraser, M.E.
Deposit date:2006-11-08
Release date:2007-07-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Participation of Cys 123alpha of Escherichia coli Succinyl-CoA Synthetase in Catalysis
ACTA CRYSTALLOGR.,SECT.D, 63, 2007
4RWM
DownloadVisualize
BU of 4rwm by Molmil
Kuenenia stuttgartiensis hydroxylamine oxidoreductase cryoprotected with ethylene glycol
Descriptor: 1,2-ETHANEDIOL, 1-[(4-cyclohexylbutanoyl)(2-hydroxyethyl)amino]-1-deoxy-D-glucitol, HEME C, ...
Authors:Dietl, A, Maalcke, W, Barends, T.R.M.
Deposit date:2014-12-05
Release date:2015-08-12
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:An unexpected reactivity of the P460 cofactor in hydroxylamine oxidoreductase.
Acta Crystallogr. D Biol. Crystallogr., 71, 2015
1B56
DownloadVisualize
BU of 1b56 by Molmil
HUMAN RECOMBINANT EPIDERMAL FATTY ACID BINDING PROTEIN
Descriptor: FATTY ACID BINDING PROTEIN, PALMITIC ACID
Authors:Van Tilbeurgh, H, Hohoff, C, Borchers, T, Spener, F.
Deposit date:1999-01-12
Release date:1999-10-05
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Expression, purification, and crystal structure determination of recombinant human epidermal-type fatty acid binding protein.
Biochemistry, 38, 1999
2O5Z
DownloadVisualize
BU of 2o5z by Molmil
Crystal structure of the 1E9 LeuH47Trp/ArgH100Trp Fab 5-beta-androstane-3,17-dione complex
Descriptor: 5-BETA-ANDROSTANE-3,17-DIONE, SULFATE ION, chimeric antibody Fab 1E9-DB3
Authors:Verdino, P, Wilson, I.A.
Deposit date:2006-12-06
Release date:2007-12-18
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Closely related antibody receptors exploit fundamentally different strategies for steroid recognition.
Proc.Natl.Acad.Sci.Usa, 105, 2008
5N5U
DownloadVisualize
BU of 5n5u by Molmil
Structure of p-boronophenylalanyl tRNA synthetase in complex with p-boronophenylalanine and adenosine monophosphate
Descriptor: 4-Borono-L-phenylalanine, ADENOSINE MONOPHOSPHATE, CHLORIDE ION, ...
Authors:Schiefner, A, Skerra, A.
Deposit date:2017-02-14
Release date:2018-02-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Basis for the Specific Cotranslational Incorporation of p-Boronophenylalanine into Biosynthetic Proteins.
Biochemistry, 57, 2018
3T3M
DownloadVisualize
BU of 3t3m by Molmil
A Novel High Affinity Integrin alphaIIbbeta3 Receptor Antagonist That Unexpectedly Displaces Mg2+ from the beta3 MIDAS
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Zhu, J, Zhu, J, Springer, T.A.
Deposit date:2011-07-25
Release date:2012-03-28
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure-Guided Design of a High-Affinity Platelet Integrin alphaIIbbeta3 Receptor Antagonist That Disrupts Mg2+ Binding to the MIDAS
Sci Transl Med, 4, 2012
3ZEW
DownloadVisualize
BU of 3zew by Molmil
Crystal structure of EphB4 in complex with staurosporine
Descriptor: EPHRIN TYPE-B RECEPTOR 4, STAUROSPORINE, SULFATE ION
Authors:Debreczeni, J.E, Overman, R, Truman, C, McAlister, M, Attwood, T.K.
Deposit date:2012-12-07
Release date:2013-12-25
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Completing the Structural Family Portrait of the Human Ephb Tyrosine Kinase Domains
Protein Sci., 23, 2014
5XLF
DownloadVisualize
BU of 5xlf by Molmil
Crystal structure of aerobically purified and aerobically crystallized D. vulgaris Miyazaki F [NiFe]-hydrogenase
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, FE3-S4 CLUSTER, IRON/SULFUR CLUSTER, ...
Authors:Nishikawa, K, Mochida, S, Hiromoto, T, Shibata, N, Higuchi, Y.
Deposit date:2017-05-10
Release date:2018-06-06
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Ni-elimination from the active site of the standard [NiFe]‐hydrogenase upon oxidation by O2.
J. Inorg. Biochem., 177, 2017
6MIW
DownloadVisualize
BU of 6miw by Molmil
WWE domain of human HUWE1
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, E3 ubiquitin-protein ligase HUWE1, UNKNOWN ATOM OR ION
Authors:Halabelian, L, Loppnau, P, Tempel, W, Wong, F, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Tong, Y, Structural Genomics Consortium (SGC)
Deposit date:2018-09-20
Release date:2018-10-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:WWE domain of human HUWE1
To Be Published
6MQ3
DownloadVisualize
BU of 6mq3 by Molmil
Structure of Cysteine-free Human Insulin-Degrading Enzyme in complex with Substrate-selective Macrocycle Inhibitor 63
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Insulin-degrading enzyme, {(8R,9S,10S)-9-(2',3'-dimethyl[1,1'-biphenyl]-4-yl)-6-[(1-methyl-1H-imidazol-2-yl)sulfonyl]-1,6-diazabicyclo[6.2.0]decan-10-yl}methanol
Authors:Tan, G.A, Seeliger, M.A, Welsh, A.J, Maianti, J.P, Liu, D.R.
Deposit date:2018-10-09
Release date:2019-04-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.569147 Å)
Cite:Substrate-selective inhibitors that reprogram the activity of insulin-degrading enzyme.
Nat.Chem.Biol., 15, 2019
5TI2
DownloadVisualize
BU of 5ti2 by Molmil
CRYSTAL STRUCTURE OF THE FIRST BROMODOMAIN OF HUMAN BRD4 IN COMPLEX WITH INHIBITOR 7635936
Descriptor: 1,2-ETHANEDIOL, 3-fluoro-N-[3-(2-oxopyrrolidin-1-yl)phenyl]benzene-1-sulfonamide, Bromodomain-containing protein 4
Authors:Zhu, J.-Y, Ember, S.W.J, SCHONBRUNN, E.
Deposit date:2016-09-30
Release date:2017-08-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Identification of a Novel Class of BRD4 Inhibitors by Computational Screening and Binding Simulations.
ACS Omega, 2, 2017
8EDE
DownloadVisualize
BU of 8ede by Molmil
Crystal structure of covalent inhibitor 2-chloro-N'-(N-(4-chlorophenyl)-N-methylglycyl)acetohydrazide bound to Ubiquitin C-terminal Hydrolase-L1
Descriptor: 2-[(4-chlorophenyl)-methyl-amino]-~{N}'-ethanoyl-ethanehydrazide, SULFATE ION, Ubiquitin carboxyl-terminal hydrolase isozyme L1
Authors:Patel, R, Imhoff, R, Flaherty, D, Das, C.
Deposit date:2022-09-04
Release date:2023-09-20
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (1.799 Å)
Cite:Covalent Fragment Screening and Optimization Identifies the Chloroacetohydrazide Scaffold as Inhibitors for Ubiquitin C-terminal Hydrolase L1.
J.Med.Chem., 67, 2024
5TI7
DownloadVisualize
BU of 5ti7 by Molmil
CRYSTAL STRUCTURE OF THE FIRST BROMODOMAIN OF HUMAN BRD4 IN COMPLEX WITH INHIBITOR 17528462
Descriptor: 1,2-ETHANEDIOL, 5-bromo-2-methoxy-N-(3-(2-oxopyrrolidin-1-yl)phenyl)benzenesulfonamide, Bromodomain-containing protein 4
Authors:Zhu, J.-Y, Ember, S.W.J, Schonbrunn, E.
Deposit date:2016-10-01
Release date:2017-08-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Identification of a Novel Class of BRD4 Inhibitors by Computational Screening and Binding Simulations.
ACS Omega, 2, 2017
6WBD
DownloadVisualize
BU of 6wbd by Molmil
Crystal Structure of Lysyl-tRNA synthetase from Stenotrophomonas maltophilia with bound L-lysine
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, LYSINE, ...
Authors:Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2020-03-26
Release date:2020-04-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal Structure of Lysyl-tRNA synthetase from Stenotrophomonas maltophilia with bound L-lysine
to be published
5TI5
DownloadVisualize
BU of 5ti5 by Molmil
CRYSTAL STRUCTURE OF THE FIRST BROMODOMAIN OF HUMAN BRD4 IN COMPLEX WITH INHIBITOR 8841880
Descriptor: 1,2-ETHANEDIOL, 3-bromo-N-[3-(2-oxo-2,3-dihydro-1H-pyrrol-1-yl)phenyl]benzene-1-sulfonamide, Bromodomain-containing protein 4
Authors:Zhu, J.-Y, Ember, S.W.J, Schonbrunn, E.
Deposit date:2016-10-01
Release date:2017-08-09
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Identification of a Novel Class of BRD4 Inhibitors by Computational Screening and Binding Simulations.
ACS Omega, 2, 2017
5TI6
DownloadVisualize
BU of 5ti6 by Molmil
CRYSTAL STRUCTURE OF THE FIRST BROMODOMAIN OF HUMAN BRD4 IN COMPLEX WITH INHIBITOR 8841881
Descriptor: 1,2-ETHANEDIOL, 2,6-difluoro-N-[3-(2-oxopyrrolidin-1-yl)phenyl]benzene-1-sulfonamide, Bromodomain-containing protein 4
Authors:Zhu, J.-Y, Ember, S.W.J, Schonbrunn, E.
Deposit date:2016-10-01
Release date:2017-08-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.704 Å)
Cite:Identification of a Novel Class of BRD4 Inhibitors by Computational Screening and Binding Simulations.
ACS Omega, 2, 2017
4RE5
DownloadVisualize
BU of 4re5 by Molmil
Acylaminoacyl peptidase complexed with a chloromethylketone inhibitor
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, Acylamino-acid-releasing enzyme, ...
Authors:Menyhard, D.K, Orgovan, Z, Szeltner, Z, Szamosi, I, Harmat, V.
Deposit date:2014-09-22
Release date:2015-01-28
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Catalytically distinct states captured in a crystal lattice: the substrate-bound and scavenger states of acylaminoacyl peptidase and their implications for functionality.
Acta Crystallogr.,Sect.D, 71, 2015
4TQH
DownloadVisualize
BU of 4tqh by Molmil
Human transthyretin (TTR) complexed with 3-(9H-fluoren-9-ylideneaminooxy)ethanoic acid
Descriptor: 1,2-ETHANEDIOL, Transthyretin, [(9H-fluoren-9-ylideneamino)oxy]acetic acid
Authors:Ciccone, L, Nencetti, S, Rossello, A, Orlandini, E, Stura, E.A.
Deposit date:2014-06-11
Release date:2015-06-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.511 Å)
Cite:X-ray crystal structure and activity of fluorenyl-based compounds as transthyretin fibrillogenesis inhibitors.
J Enzyme Inhib Med Chem, 2015
1A4B
DownloadVisualize
BU of 1a4b by Molmil
AZURIN MUTANT WITH MET 121 REPLACED BY HIS, PH 6.5 CRYSTAL FORM, DATA COLLECTED AT-180 DEGREES CELSIUS
Descriptor: AZURIN, COPPER (II) ION, SULFATE ION
Authors:Messerschmidt, A, Prade, L.
Deposit date:1998-01-28
Release date:1998-04-29
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Rack-induced metal binding vs. flexibility: Met121His azurin crystal structures at different pH.
Proc.Natl.Acad.Sci.USA, 95, 1998
1W4W
DownloadVisualize
BU of 1w4w by Molmil
Ferric horseradish peroxidase C1A in complex with formate
Descriptor: CALCIUM ION, FORMIC ACID, HORSERADISH PEROXIDASE C1A, ...
Authors:Carlsson, G.H, Nicholls, P, Svistunenko, D, Berglund, G.I, Hajdu, J.
Deposit date:2004-08-03
Release date:2005-01-19
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Complexes of Horseradish Peroxidase with Formate, Acetate, and Carbon Monoxide
Biochemistry, 44, 2005
2W3U
DownloadVisualize
BU of 2w3u by Molmil
formate complex of the Ni-Form of E.coli deformylase
Descriptor: FORMIC ACID, NICKEL (II) ION, PEPTIDE DEFORMYLASE
Authors:Ngo, Y.H.T, Palm, G.J, Hinrichs, W.
Deposit date:2008-11-14
Release date:2009-12-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structure of the Ni(II) Complex of Escherichia Coli Peptide Deformylase and Suggestions on Deformylase Activities Depending on Different Metal(II) Centres.
J.Biol.Inorg.Chem., 15, 2010
2OOZ
DownloadVisualize
BU of 2ooz by Molmil
Macrophage Migration Inhibitory Factor (MIF) Complexed with OXIM6 (an OXIM Derivative Not Containing a Ring in its R-group)
Descriptor: 4-HYDROXYBENZALDEHYDE O-(3,3-DIMETHYLBUTANOYL)OXIME, GLYCEROL, ISOPROPYL ALCOHOL, ...
Authors:Crichlow, G.V, Al-Abed, Y, Lolis, E.
Deposit date:2007-01-26
Release date:2007-06-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Alternative chemical modifications reverse the binding orientation of a pharmacophore scaffold in the active site of macrophage migration inhibitory factor.
J.Biol.Chem., 282, 2007
2VP1
DownloadVisualize
BU of 2vp1 by Molmil
Fe-FutA2 from Synechocystis PCC6803
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, FE (III) ION, ...
Authors:Badarau, A, Firbank, S.J, Banfield, M.J, Dennison, C.
Deposit date:2008-02-26
Release date:2008-03-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Futa2 is a Ferric Binding Protein from Synechocystis Pcc 6803.
J.Biol.Chem., 283, 2008

227344

PDB entries from 2024-11-13

PDB statisticsPDBj update infoContact PDBjnumon