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6SVL
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BU of 6svl by Molmil
human Myeloid-derived growth factor (MYDGF) in complex with neutralizing Fab
Descriptor: Fab_heavy_chain, Fab_light_chain, GLYCEROL, ...
Authors:Ebenhoch, R, Nar, H.
Deposit date:2019-09-18
Release date:2019-11-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Crystal structure and receptor-interacting residues of MYDGF - a protein mediating ischemic tissue repair.
Nat Commun, 10, 2019
1BYL
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BU of 1byl by Molmil
BLEOMYCIN RESISTANCE PROTEIN FROM STREPTOALLOTEICHUS HINDUSTANUS
Descriptor: PROTEIN (BLEOMYCIN RESISTANCE PROTEIN)
Authors:Dumas, P, Bergdoll, M, Cagnon, C, Masson, J.M.
Deposit date:1998-10-17
Release date:1999-10-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure and site-directed mutagenesis of a bleomycin resistance protein and their significance for drug sequestering.
EMBO J., 13, 1994
5ME7
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BU of 5me7 by Molmil
Crystal Structure of eiF4E from C. melo
Descriptor: Eukaryotic transcription initiation factor 4E, GLYCEROL
Authors:Querol-Audi, J, Silva, C, Miras, M, Aranda-Regules, M, Verdaguer, N.
Deposit date:2016-11-14
Release date:2017-08-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of eIF4E in Complex with an eIF4G Peptide Supports a Universal Bipartite Binding Mode for Protein Translation.
Plant Physiol., 174, 2017
6SSH
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BU of 6ssh by Molmil
Structure of the TSC2 GAP domain
Descriptor: 1,2-ETHANEDIOL, GTPase activator-like protein
Authors:Hansmann, P, Kiontke, S, Kummel, D.
Deposit date:2019-09-06
Release date:2020-05-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure of the TSC2 GAP Domain: Mechanistic Insight into Catalysis and Pathogenic Mutations.
Structure, 28, 2020
2HAP
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BU of 2hap by Molmil
STRUCTURE OF A HAP1-18/DNA COMPLEX REVEALS THAT PROTEIN/DNA INTERACTIONS CAN HAVE DIRECT ALLOSTERIC EFFECTS ON TRANSCRIPTIONAL ACTIVATION
Descriptor: DNA (5'-D(*AP*CP*GP*CP*TP*AP*TP*TP*AP*TP*CP*GP*CP*TP*AP*TP*TP*AP*GP*T)-3'), DNA (5'-D(*AP*CP*TP*AP*AP*TP*AP*GP*CP*GP*AP*TP*AP*AP*TP*AP*GP*CP*GP*T)-3'), PROTEIN (HEME ACTIVATOR PROTEIN), ...
Authors:King, D.A, Zhang, L, Guarente, L, Marmorstein, R.
Deposit date:1998-09-17
Release date:1999-11-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of HAP1-18-DNA implicates direct allosteric effect of protein-DNA interactions on transcriptional activation.
Nat.Struct.Biol., 6, 1999
7K66
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BU of 7k66 by Molmil
Structure of Blood Coagulation Factor VIII in Complex with an Anti-C1 Domain Pathogenic Antibody Inhibitor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2A9 heavy chain, ...
Authors:Childers, K.C, Gish, J, Jarvis, L, Peters, S, Garrels, C, Smith, I.W, Spencer, H.T, Spiegel, P.C.
Deposit date:2020-09-18
Release date:2020-10-14
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.92 Å)
Cite:Structure of blood coagulation factor VIII in complex with an anti-C1 domain pathogenic antibody inhibitor.
Blood, 137, 2021
8FNB
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BU of 8fnb by Molmil
Crystal structure of the C-terminal Fg domain of human TNC with the mutations Y2140H and S2164H
Descriptor: CALCIUM ION, SULFATE ION, Tenascin
Authors:Bouyain, S.
Deposit date:2022-12-27
Release date:2023-07-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Protein-protein interactions between tenascin-R and RPTP zeta /phosphacan are critical to maintain the architecture of perineuronal nets.
J.Biol.Chem., 299, 2023
2HAC
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BU of 2hac by Molmil
Structure of Zeta-Zeta Transmembrane Dimer
Descriptor: T-cell surface glycoprotein CD3 zeta chain
Authors:Chou, J.J, Wucherpfennig, K.W, Schnell, J.R, Call, M.E.
Deposit date:2006-06-12
Release date:2006-10-31
Last modified:2021-10-20
Method:SOLUTION NMR
Cite:The structure of the zetazeta transmembrane dimer reveals features essential for its assembly with the T cell receptor.
Cell(Cambridge,Mass.), 127, 2006
6NOU
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BU of 6nou by Molmil
An scFv derived from ixekizumab
Descriptor: GLYCEROL, scFv derived from ixekizumab
Authors:Durbin, J.D, Clawson, D.K, Lu, F, Tian, Y, Lu, J, Atwell, S.
Deposit date:2019-01-16
Release date:2019-06-19
Last modified:2019-08-14
Method:X-RAY DIFFRACTION (1.914 Å)
Cite:Development of tibulizumab, a tetravalent bispecific antibody targeting BAFF and IL-17A for the treatment of autoimmune disease.
Mabs, 11, 2019
6SW6
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BU of 6sw6 by Molmil
Crystal structure R264H mutant of the human S-adenosylmethionine synthetase 1
Descriptor: S-adenosylmethionine synthase isoform type-1
Authors:Panmanee, J, Antonyuk, S.V, Hasnain, S.S.
Deposit date:2019-09-19
Release date:2020-06-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structural basis of the dominant inheritance of hypermethioninemia associated with the Arg264His mutation in the MAT1A gene.
Acta Crystallogr D Struct Biol, 76, 2020
8FNA
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BU of 8fna by Molmil
Crystal structure of the C-terminal Fg domain of human TNR
Descriptor: CALCIUM ION, GLYCEROL, Tenascin-R
Authors:Bouyain, S.
Deposit date:2022-12-27
Release date:2023-07-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Protein-protein interactions between tenascin-R and RPTP zeta /phosphacan are critical to maintain the architecture of perineuronal nets.
J.Biol.Chem., 299, 2023
6SD5
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BU of 6sd5 by Molmil
Structure of the RBM2 inner ring of Salmonella flagella MS-ring protein FliF with 22-fold symmetry applied
Descriptor: Flagellar M-ring protein
Authors:Johnson, S, Fong, Y.H, Deme, J.C, Furlong, E.J, Kuhlen, L, Lea, S.M.
Deposit date:2019-07-26
Release date:2020-03-18
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Symmetry mismatch in the MS-ring of the bacterial flagellar rotor explains the structural coordination of secretion and rotation.
Nat Microbiol, 5, 2020
6O06
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BU of 6o06 by Molmil
Extracellular factors prime enterovirus particles for uncoating
Descriptor: VP1, VP2, VP3
Authors:Domanska, A, Ruokolainen, V, Pelliccia, M, Laajala, M, Butcher, S.J, Marjomaki, V.S.
Deposit date:2019-02-15
Release date:2019-06-12
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Extracellular Albumin and Endosomal Ions Prime Enterovirus Particles for Uncoating That Can Be Prevented by Fatty Acid Saturation.
J.Virol., 93, 2019
6SVC
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BU of 6svc by Molmil
Protein allostery of the WW domain at atomic resolution: apo structure
Descriptor: Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
Authors:Strotz, D, Orts, J, Friedmann, M, Guntert, P, Vogeli, B, Riek, R.
Deposit date:2019-09-18
Release date:2020-09-30
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Protein Allostery at Atomic Resolution.
Angew.Chem.Int.Ed.Engl., 59, 2020
8SMV
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BU of 8smv by Molmil
GPR161 Gs heterotrimer
Descriptor: CHOLESTEROL, G-protein coupled receptor 161, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Hoppe, N, Manglik, A, Harrison, S.
Deposit date:2023-04-26
Release date:2024-02-21
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (2.74 Å)
Cite:GPR161 structure uncovers the redundant role of sterol-regulated ciliary cAMP signaling in the Hedgehog pathway.
Biorxiv, 2023
5KDF
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BU of 5kdf by Molmil
Inorganic pyrophosphatase from Mycobacterium tuberculosis in complex with inhibitor 6 and inorganic pyrophosphate
Descriptor: CALCIUM ION, Inorganic pyrophosphatase, PYROPHOSPHATE 2-, ...
Authors:Pang, A.H, Garzan, A, Garneau-Tsodikova, S, Tsodikov, O.V.
Deposit date:2016-06-08
Release date:2016-09-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Discovery of Allosteric and Selective Inhibitors of Inorganic Pyrophosphatase from Mycobacterium tuberculosis.
ACS Chem. Biol., 11, 2016
6C26
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BU of 6c26 by Molmil
The Cryo-EM structure of a eukaryotic oligosaccharyl transferase complex
Descriptor: (4R,7R)-4-hydroxy-N,N,N-trimethyl-4,9-dioxo-7-[(undecanoyloxy)methyl]-3,5,8-trioxa-4lambda~5~-phosphadocosan-1-aminium, 2-acetamido-2-deoxy-beta-D-glucopyranose, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1, ...
Authors:Bai, L, Li, H.
Deposit date:2018-01-06
Release date:2018-01-31
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:The atomic structure of a eukaryotic oligosaccharyltransferase complex.
Nature, 555, 2018
5MRA
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BU of 5mra by Molmil
human SCBD (sorcin calcium binding domain) in complex with doxorubicin
Descriptor: DIMETHYL SULFOXIDE, DOXORUBICIN, MAGNESIUM ION, ...
Authors:Ilari, A, Fiorillo, A, Colotti, G, Genovese, I.
Deposit date:2016-12-22
Release date:2017-11-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.74 Å)
Cite:Binding of doxorubicin to Sorcin impairs cell death and increases drug resistance in cancer cells.
Cell Death Dis, 8, 2017
1BND
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BU of 1bnd by Molmil
STRUCTURE OF THE BRAIN-DERIVED NEUROTROPHIC FACTOR(SLASH)NEUROTROPHIN 3 HETERODIMER
Descriptor: BRAIN DERIVED NEUROTROPHIC FACTOR, ISOPROPYL ALCOHOL, NEUROTROPHIN 3
Authors:Robinson, R.C, Radziejewski, C, Stuart, D.I, Jones, E.Y.
Deposit date:1994-12-12
Release date:1996-04-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the brain-derived neurotrophic factor/neurotrophin 3 heterodimer.
Biochemistry, 34, 1995
5NBW
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BU of 5nbw by Molmil
Crystal structure of the Fab fragment 22F12 in complex with 3-hydroxybenzo[a]pyrene
Descriptor: Fab 22F12 (A,B), Fab 22F12 (L,H), benzo[a]pyren-3-ol
Authors:Skerra, A, Eichinger, A.
Deposit date:2017-03-02
Release date:2017-06-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Tight Molecular Recognition of Benzo[a]pyrene by a High-Affinity Antibody.
Angew. Chem. Int. Ed. Engl., 56, 2017
1G2K
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BU of 1g2k by Molmil
HIV-1 PROTEASE WITH CYCLIC SULFAMIDE INHIBITOR, AHA047
Descriptor: 3-(7-BENZYL-4,5-DIHYDROXY-1,1-DIOXO-3,6-BIS-PHENOXYMETHYL-1L6-[1,2,7]THIADIAZEPAN-2-YLMETHYL)-N-METHYL-BENZAMIDE, PROTEASE RETROPEPSIN
Authors:Lindberg, J, Unge, T.
Deposit date:2000-10-20
Release date:2001-06-01
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Synthesis and comparative molecular field analysis (CoMFA) of symmetric and nonsymmetric cyclic sulfamide HIV-1 protease inhibitors.
J.Med.Chem., 44, 2001
8FN8
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BU of 8fn8 by Molmil
Crystal structure of the C-terminal Fg domain of TNC with the single FN domain of PTPRZ
Descriptor: CALCIUM ION, Receptor-type tyrosine-protein phosphatase zeta, Tenascin
Authors:Bouyain, S.
Deposit date:2022-12-27
Release date:2023-07-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Protein-protein interactions between tenascin-R and RPTP zeta /phosphacan are critical to maintain the architecture of perineuronal nets.
J.Biol.Chem., 299, 2023
6SPK
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BU of 6spk by Molmil
A4V MUTANT OF HUMAN SOD1 WITH EBSELEN DERIVATIVE 6
Descriptor: 2-selanyl-~{N}-[3-[4-(trifluoromethyl)phenyl]phenyl]benzamide, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Chantadul, V, Amporndanai, K, Wright, G, Shahid, M, Antonyuk, S, Hasnain, S.
Deposit date:2019-09-01
Release date:2020-03-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Ebselen as template for stabilization of A4V mutant dimer for motor neuron disease therapy.
Commun Biol, 3, 2020
5KGX
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BU of 5kgx by Molmil
HIV1 catalytic core domain in complex with an inhibitor (2~{S})-2-[3-(3,4-dihydro-2~{H}-chromen-6-yl)-1-methyl-indol-2-yl]-2-[(2-methylpropan-2-yl)oxy]ethanoic acid
Descriptor: (2S)-tert-butoxy[3-(3,4-dihydro-2H-1-benzopyran-6-yl)-1-methyl-1H-indol-2-yl]acetic acid, Integrase, SULFATE ION
Authors:Feng, L, Kobe, M, Kvaratskhelia, M.
Deposit date:2016-06-13
Release date:2016-10-19
Last modified:2018-03-07
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Indole-based allosteric inhibitors of HIV-1 integrase.
Bioorg.Med.Chem.Lett., 26, 2016
6C8W
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BU of 6c8w by Molmil
Crystal structure of Aspartate Semialdehyde Dehydrogenase with NADP from Blastomyces dermatitidis
Descriptor: Aspartate-semialdehyde dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Dahal, G.P, Viola, R.E.
Deposit date:2018-01-25
Release date:2019-01-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural insights into inhibitor binding to a fungal ortholog of aspartate semialdehyde dehydrogenase.
Biochem.Biophys.Res.Commun., 503, 2018

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