PDB: 53102 resultsInfo pagesStatus searchChemie searchBIRD

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7KLR	Solution structure of the PHD1 domain of histone demethylase KDM5A in complex with a histone H3(1-10) peptide Descriptor: Histone H3.1, Lysine-specific demethylase 5A, ZINC ION Authors: Longbotham, E.J, Kelly, M.J.S, Fujimori, D.G. Deposit date: 2020-10-31 Release date: 2021-03-03 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Recognition of Histone H3 Methylation States by the PHD1 Domain of Histone Demethylase KDM5A. Acs Chem.Biol., 2021
6QAN	Structure determination of N-terminal fragment of UL49.5 protein from bovine herpesvirus 1 by NMR spectroscopy and molecular dynamics Descriptor: Envelope glycoprotein N Authors: Karska, N, Rodziewicz-Motowidlo, S. Deposit date: 2018-12-19 Release date: 2019-02-27 Last modified: 2023-11-15 Method: SOLUTION NMR Cite: Structure determination of UL49.5 transmembrane protein from bovine herpesvirus 1 by NMR spectroscopy and molecular dynamics. Biochim Biophys Acta Biomembr, 1861, 2019
6Q31	Dye type peroxidase Aa from Streptomyces lividans: 156.8 kGy structure Descriptor: Deferrochelatase/peroxidase, PROTOPORPHYRIN IX CONTAINING FE Authors: Ebrahim, A, Moreno-Chicano, T, Worrall, J.A.R, Strange, R.W, Axford, D, Sherrell, D.A, Appleby, M, Owen, R.L. Deposit date: 2018-12-03 Release date: 2019-07-31 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.78 Å) Cite: Dose-resolved serial synchrotron and XFEL structures of radiation-sensitive metalloproteins. Iucrj, 6, 2019
8F25	Cryo-EM structure of Lumazine synthase nanoparticle linked to VP8* antigen Descriptor: 6,7-dimethyl-8-ribityllumazine synthase Authors: Mangala Prasad, V, Lee, K.K. Deposit date: 2022-11-07 Release date: 2023-04-12 Last modified: 2024-01-10 Method: ELECTRON MICROSCOPY (2.6 Å) Cite: mRNA-based VP8* nanoparticle vaccines against rotavirus are highly immunogenic in rodents. Npj Vaccines, 8, 2023
6Q34	Dye type peroxidase Aa from Streptomyces lividans: 196 kGy structure Descriptor: Deferrochelatase/peroxidase, PROTOPORPHYRIN IX CONTAINING FE Authors: Ebrahim, A, Moreno-Chicano, T, Worrall, J.A.R, Strange, R.W, Axford, D, Sherrell, D.A, Appleby, M, Owen, R.L. Deposit date: 2018-12-03 Release date: 2019-07-31 Last modified: 2024-05-15 Method: X-RAY DIFFRACTION (1.82 Å) Cite: Dose-resolved serial synchrotron and XFEL structures of radiation-sensitive metalloproteins. Iucrj, 6, 2019
8EKE	Cryo-EM structure of SARS CoV-2 Mpro WT protease Descriptor: 3C-like proteinase nsp5 Authors: Narwal, M, Edwards, T, Armache, J.P, Murakami, K.S. Deposit date: 2022-09-20 Release date: 2023-04-26 Last modified: 2024-06-19 Method: ELECTRON MICROSCOPY (3.36 Å) Cite: SARS-CoV-2 polyprotein substrate regulates the stepwise M pro cleavage reaction. J.Biol.Chem., 299, 2023
6Q3D	Dye type peroxidase Aa from Streptomyces lividans: 235.2 kGy structure Descriptor: Deferrochelatase/peroxidase, PROTOPORPHYRIN IX CONTAINING FE Authors: Ebrahim, A, Moreno-Chicano, T, Worrall, J.A.R, Strange, R.W, Axford, D, Sherrell, D.A, Appleby, M, Owen, R.L. Deposit date: 2018-12-04 Release date: 2019-07-31 Last modified: 2024-05-15 Method: X-RAY DIFFRACTION (1.93 Å) Cite: Dose-resolved serial synchrotron and XFEL structures of radiation-sensitive metalloproteins. Iucrj, 6, 2019
8ESV	Structure of human ADAM10-Tspan15 complex bound to 11G2 vFab Descriptor: 11G2 Fab Heavy Chain, 11G2 Fab Light Chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Lipper, C.H, Blacklow, S.C. Deposit date: 2022-10-14 Release date: 2023-06-14 Last modified: 2023-08-30 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: Structural basis for membrane-proximal proteolysis of substrates by ADAM10. Cell, 186, 2023
4GHL	Structural Basis for Marburg virus VP35 mediate immune evasion mechanisms Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, MAGNESIUM ION, ... Authors: Ramanan, P, Borek, D.M, Otwinowski, Z, Leung, D.W, Amarasinghe, G.K. Deposit date: 2012-08-07 Release date: 2012-11-28 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.02 Å) Cite: Structural basis for Marburg virus VP35-mediated immune evasion mechanisms. Proc.Natl.Acad.Sci.USA, 109, 2012
8EU9	Class1 of the INO80-Nucleosome complex Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin-related protein 5, Chromatin-remodeling ATPase INO80, ... Authors: Wu, H, Munoz, E, Gourdet, M, Cheng, Y.F, Narlikar, G. Deposit date: 2022-10-18 Release date: 2023-07-12 Last modified: 2024-06-19 Method: ELECTRON MICROSCOPY (3.48 Å) Cite: Reorientation of INO80 on hexasomes reveals basis for mechanistic versatility. Science, 381, 2023
6TJ3	P. falciparum essential light chain, N-terminal domain Descriptor: PfELC Authors: Weininger, U, Pazicky, S, Loew, C. Deposit date: 2019-11-25 Release date: 2020-10-28 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Structural role of essential light chains in the apicomplexan glideosome. Commun Biol, 3, 2020
7TIO	B Domain of Staphylococcal protein A: Native backbone Descriptor: Immunoglobulin G binding protein A Authors: Santhouse, J.R, Leung, J.M.G, Chong, L.T, Horne, W.S. Deposit date: 2022-01-14 Release date: 2022-11-23 Method: SOLUTION NMR Cite: Implications of the unfolded state in the folding energetics of heterogeneous-backbone protein mimetics. Chem Sci, 13, 2022
6Q3E	Dye type peroxidase Aa from Streptomyces lividans: 274.4 kGy structure Descriptor: Deferrochelatase/peroxidase, PROTOPORPHYRIN IX CONTAINING FE Authors: Ebrahim, A, Moreno-Chicano, T, Worrall, J.A.R, Strange, R.W, Axford, D, Sherrell, D.A, Appleby, M, Owen, R.L. Deposit date: 2018-12-04 Release date: 2019-07-31 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2.03 Å) Cite: Dose-resolved serial synchrotron and XFEL structures of radiation-sensitive metalloproteins. Iucrj, 6, 2019
8EOK	Structure of the C3bB proconvertase in complex with lufaxin and factor Xa Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Activated factor Xa heavy chain, Complement C3 beta chain, ... Authors: Andersen, J.F, Lei, H. Deposit date: 2022-10-03 Release date: 2023-08-30 Method: ELECTRON MICROSCOPY (3.53 Å) Cite: A bispecific inhibitor of complement and coagulation blocks activation in complementopathy models via a novel mechanism. Blood, 141, 2023
8EKI	CryoEM structure of the Dsl1 complex bound to SNAREs Sec20 and Use1 Descriptor: Protein transport protein DSL1, Protein transport protein SEC20, Protein transport protein SEC39, ... Authors: DAmico, K.A, Jeffrey, P.D, Hughson, F.M. Deposit date: 2022-09-21 Release date: 2023-10-04 Last modified: 2024-02-28 Method: ELECTRON MICROSCOPY (4.5 Å) Cite: Structure of a membrane tethering complex incorporating multiple SNAREs. Nat.Struct.Mol.Biol., 31, 2024
8EVT	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES) refined against a composite map Descriptor: 18S rRNA, 25S rRNA, 40S ribosomal protein S0-A, ... Authors: Zhao, Y, Rai, J, Li, H. Deposit date: 2022-10-20 Release date: 2023-09-06 Last modified: 2023-11-01 Method: ELECTRON MICROSCOPY (2.2 Å) Cite: Regulation of translation by ribosomal RNA pseudouridylation. Sci Adv, 9, 2023
1I46	The solution structure of the mutant stem loop C 5'GUA3' triloop of brome mosaic virus (+) strand RNA Descriptor: 5'-R(*GP*GP*UP*GP*CP*GP*UP*AP*GP*CP*AP*CP*C)-3' Authors: Kim, C.-H, Tinoco Jr, I. Deposit date: 2001-02-20 Release date: 2001-04-21 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Structural and thermodynamic studies on mutant RNA motifs that impair the specificity between a viral replicase and its promoter J.Mol.Biol., 307, 2001
1I4C	THE SOLUTION STRUCTURE OF THE MINOR FAMILY OF THE MUTANT STEM LOOP C 5'UUA3' TRILOOP OF BROME MOSAIC VIRUS (+) STRAND RNA Descriptor: RNA (5'-R(*GP*GP*UP*GP*CP*UP*UP*AP*GP*CP*AP*CP*C)-3') Authors: Tinoco Jr, I, Kim, C.-H. Deposit date: 2001-02-20 Release date: 2001-04-21 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Structural and thermodynamic studies on mutant RNA motifs that impair the specificity between a viral replicase and its promoter. J.Mol.Biol., 307, 2001
7N99	SDE2 SAP domain apo structure Descriptor: Isoform 2 of Replication stress response regulator SDE2 Authors: Paung, Y, Weinheimer, A.S, Rageul, J, Khan, A, Ho, B, Tong, M, Alphonse, S, Seeliger, M.A, Kim, H. Deposit date: 2021-06-17 Release date: 2022-10-12 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Extended DNA-binding interfaces beyond the canonical SAP domain contribute to the function of replication stress regulator SDE2 at DNA replication forks. J.Biol.Chem., 298, 2022
8GG1	CryoEM structure of beta-2-adrenergic receptor in complex with GTP-bound Gs heterotrimer (transition intermediate #7 of 20) Descriptor: (5R,6R)-6-(methylamino)-5,6,7,8-tetrahydronaphthalene-1,2,5-triol, Beta-2 adrenergic receptor, GUANOSINE-5'-TRIPHOSPHATE, ... Authors: Papasergi-Scott, M.M, Skiniotis, G. Deposit date: 2023-03-08 Release date: 2024-03-06 Last modified: 2024-06-12 Method: ELECTRON MICROSCOPY (3 Å) Cite: Time-resolved cryo-EM of G-protein activation by a GPCR. Nature, 629, 2024
8GGM	Locally refined cryoEM structure of receptor from beta-2-adrenergic receptor in complex with GTP-bound Gs heterotrimer (transition intermediate #5 of 20) Descriptor: (5R,6R)-6-(methylamino)-5,6,7,8-tetrahydronaphthalene-1,2,5-triol, Beta-2 adrenergic receptor Authors: Papasergi-Scott, M.M, Skiniotis, G. Deposit date: 2023-03-08 Release date: 2024-03-06 Last modified: 2024-06-05 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Time-resolved cryo-EM of G-protein activation by a GPCR. Nature, 629, 2024
8GGX	Locally refined cryoEM structure of receptor from beta-2-adrenergic receptor in complex with GTP-bound Gs heterotrimer (transition intermediate #16 of 20) Descriptor: (5R,6R)-6-(methylamino)-5,6,7,8-tetrahydronaphthalene-1,2,5-triol, Beta-2 adrenergic receptor Authors: Papasergi-Scott, M.M, Skiniotis, G. Deposit date: 2023-03-08 Release date: 2024-03-06 Last modified: 2024-06-05 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Time-resolved cryo-EM of G-protein activation by a GPCR. Nature, 629, 2024
8GFY	CryoEM structure of beta-2-adrenergic receptor in complex with GTP-bound Gs heterotrimer (transition intermediate #4 of 20) Descriptor: (5R,6R)-6-(methylamino)-5,6,7,8-tetrahydronaphthalene-1,2,5-triol, Beta-2 adrenergic receptor, GUANOSINE-5'-TRIPHOSPHATE, ... Authors: Papasergi-Scott, M.M, Skiniotis, G. Deposit date: 2023-03-08 Release date: 2024-03-06 Last modified: 2024-06-12 Method: ELECTRON MICROSCOPY (3 Å) Cite: Time-resolved cryo-EM of G-protein activation by a GPCR. Nature, 629, 2024
8GGB	CryoEM structure of beta-2-adrenergic receptor in complex with GTP-bound Gs heterotrimer (transition intermediate #17 of 20) Descriptor: (5R,6R)-6-(methylamino)-5,6,7,8-tetrahydronaphthalene-1,2,5-triol, Beta-2 adrenergic receptor, GUANOSINE-5'-TRIPHOSPHATE, ... Authors: Papasergi-Scott, M.M, Skiniotis, G. Deposit date: 2023-03-08 Release date: 2024-03-06 Last modified: 2024-06-12 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: Time-resolved cryo-EM of G-protein activation by a GPCR. Nature, 629, 2024
8GH0	Locally refined cryoEM structure of receptor from beta-2-adrenergic receptor in complex with GTP-bound Gs heterotrimer (transition intermediate #19 of 20) Descriptor: (5R,6R)-6-(methylamino)-5,6,7,8-tetrahydronaphthalene-1,2,5-triol, Beta-2 adrenergic receptor Authors: Papasergi-Scott, M.M, Skiniotis, G. Deposit date: 2023-03-08 Release date: 2024-03-06 Last modified: 2024-06-05 Method: ELECTRON MICROSCOPY (4 Å) Cite: Time-resolved cryo-EM of G-protein activation by a GPCR. Nature, 629, 2024

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