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1WGD
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BU of 1wgd by Molmil
Solution structure of the Ubl-domain of Herp
Descriptor: Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein
Authors:Nakanishi, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-28
Release date:2004-11-28
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the Ubl-domain of Herp
To be Published
1X1M
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BU of 1x1m by Molmil
Solution Structure of the N-terminal Ubiquitin-like Domain in Mouse Ubiquitin-like Protein SB132
Descriptor: Ubiquitin-like protein SB132
Authors:Zhao, C, Tomizawa, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-04-07
Release date:2005-10-07
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution Structure of the N-terminal Ubiquitin-like Domain in Mouse Ubiquitin-like Protein SB132
To be Published
1WR1
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BU of 1wr1 by Molmil
The complex structure of Dsk2p UBA with ubiquitin
Descriptor: Ubiquitin, Ubiquitin-like protein DSK2
Authors:Ohno, A, Jee, J.G, Fujiwara, K, Tenno, T, Goda, N, Tochio, H, Hiroaki, H, kobayashi, H, Shirakawa, M.
Deposit date:2004-10-08
Release date:2005-04-19
Last modified:2023-09-27
Method:SOLUTION NMR
Cite:Structure of the UBA domain of Dsk2p in complex with ubiquitin molecular determinants for ubiquitin recognition.
Structure, 13, 2005
1WX8
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BU of 1wx8 by Molmil
Solution Structure of the N-terminal Ubiquitin-like Domain in the 4931431F19Rik Protein
Descriptor: RIKEN cDNA 4931431F19
Authors:Zhao, C, Tomizawa, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-01-20
Release date:2005-07-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution Structure of the N-terminal Ubiquitin-like Domain in the 4931431F19Rik Protein
To be Published
1WE7
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BU of 1we7 by Molmil
Solution structure of Ubiquitin-like domain in SF3a120
Descriptor: Sf3a1 protein
Authors:He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-24
Release date:2004-11-24
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of Ubiquitin-like domain in SF3a120
To be Published
1WH3
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BU of 1wh3 by Molmil
Solution structure of C-terminal ubiquitin like domain of human 2'-5'-oligoadenylate synthetase-like protain (p59 OASL)
Descriptor: 59 kDa 2'-5'-oligoadenylate synthetase like protein
Authors:Tochio, N, Tomizawa, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-28
Release date:2004-11-28
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of C-terminal ubiquitin like domain of human 2'-5'-oligoadenylate synthetase-like protain (p59 OASL)
To be Published
1WX7
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BU of 1wx7 by Molmil
Solution Structure of the N-terminal Ubiquitin-like Domain in the Human Ubiquilin 3 (UBQLN3)
Descriptor: Ubiquilin 3
Authors:Zhao, C, Saito, K, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-01-20
Release date:2005-07-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution Structure of the N-terminal Ubiquitin-like Domain in the Human Ubiquilin 3 (UBQLN3)
To be Published
3ONS
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BU of 3ons by Molmil
Crystal structure of Human Ubiquitin in a new crystal form
Descriptor: Ubiquitin
Authors:Amodeo, G.A, Huang, K.Y, Mcdermott, A.E, Tong, L.
Deposit date:2010-08-30
Release date:2011-02-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The structure of human ubiquitin in 2-methyl-2,4-pentanediol: a new conformational switch.
Protein Sci., 20, 2011
1WY8
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BU of 1wy8 by Molmil
Solution Structure of the N-terminal Ubiquitin-like Domain in Human Np95/ICBP90-like Ring Finger Protein (NIRF)
Descriptor: Np95-like ring finger protein, isoform a
Authors:Zhao, C, Saito, K, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-02-09
Release date:2005-08-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution Structure of the N-terminal Ubiquitin-like Domain in Human Np95/ICBP90-like Ring Finger Protein (NIRF)
To be Published
1YQB
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BU of 1yqb by Molmil
Human Ubiquilin 3
Descriptor: Ubiquilin 3
Authors:Walker, J.R, Xue, S, Avvakumov, G.V, Newman, E.M, Mackenzie, F, Sundstrom, M, Arrowsmith, C, Edwards, A, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
Deposit date:2005-02-01
Release date:2005-02-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Ubiquitin-like domain of Human Ubiquilin 3
To be Published
7KEO
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BU of 7keo by Molmil
Crystal structure of K29-linked di-ubiquitin in complex with synthetic antigen binding fragment
Descriptor: PHOSPHATE ION, Synthetic antigen binding fragment, heavy chain, ...
Authors:Yu, Y, Zheng, Q, Erramilli, S, Pan, M, Kossiakoff, A, Liu, L, Zhao, M.
Deposit date:2020-10-11
Release date:2021-07-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:K29-linked ubiquitin signaling regulates proteotoxic stress response and cell cycle.
Nat.Chem.Biol., 17, 2021
3OJ3
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BU of 3oj3 by Molmil
Crystal structure of the A20 ZnF4 and ubiquitin complex
Descriptor: Tumor necrosis factor alpha-induced protein 3, Ubiquitin, ZINC ION
Authors:Bosanac, I, Hymowitz, S.G.
Deposit date:2010-08-20
Release date:2010-12-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Ubiquitin Binding to A20 ZnF4 Is Required for Modulation of NF-KB Signaling
Mol.Cell, 40, 2010
1XQQ
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BU of 1xqq by Molmil
Simultaneous determination of protein structure and dynamics
Descriptor: ubiquitin
Authors:Lindorff-Larsen, K, Best, R.B, DePristo, M.A, Vendruscolo, M, Dobson, C.M.
Deposit date:2004-10-13
Release date:2005-02-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Simultaneous determination of protein structure and dynamics
Nature, 433, 2005
3M3J
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BU of 3m3j by Molmil
A new crystal form of Lys48-linked diubiquitin
Descriptor: 1,2-ETHANEDIOL, SULFATE ION, Ubiquitin
Authors:Trempe, J.F, Brown, N.R, Noble, M.E.M, Endicott, J.A.
Deposit date:2010-03-09
Release date:2010-03-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A new crystal form of Lys48-linked diubiquitin.
Acta Crystallogr.,Sect.F, 66, 2010
1ZW7
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BU of 1zw7 by Molmil
Elimination of the C-cap in Ubiquitin Structure, Dynamics and Thermodynamic Consequences
Descriptor: Ubiquitin
Authors:Ermolenko, D.N, Dangi, B, Gronenborn, A.M, Makhatadze, G.I.
Deposit date:2005-06-03
Release date:2006-05-16
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Elimination of the C-cap in ubiquitin-structure, dynamics and thermodynamic consequences.
Biophys.Chem., 126, 2007
3NOB
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BU of 3nob by Molmil
Structure of K11-linked di-ubiquitin
Descriptor: SULFATE ION, Ubiquitin
Authors:Dong, K.C, Matsumoto, M.L, Hymowitz, S.G.
Deposit date:2010-06-25
Release date:2010-08-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:K11-Linked Polyubiquitination in Cell Cycle Control Revealed by a K11 Linkage-Specific Antibody.
Mol.Cell, 39, 2010
1YIW
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BU of 1yiw by Molmil
X-ray Crystal Structure of a Chemically Synthesized Ubiquitin
Descriptor: CADMIUM ION, CHLORIDE ION, Ubiquitin
Authors:Bang, D, Makhatadze, G.I, Tereshko, V, Kossiakoff, A.A, Kent, S.B.
Deposit date:2005-01-13
Release date:2005-06-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:X-ray Crystal Structure of a Chemically Synthesized [D-Gln35]Ubiquitin
Angew.Chem.Int.Ed.Engl., 44, 2005
3NS8
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BU of 3ns8 by Molmil
Crystal structure of an open conformation of Lys48-linked diubiquitin at pH 7.5
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, Ubiquitin
Authors:Zhang, D, LaRonde-LeBlanc, N, Fushman, D.
Deposit date:2010-07-01
Release date:2011-07-20
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.707 Å)
Cite:Structural and biochemical studies of the open state of Lys48-linked diubiquitin.
Biochim.Biophys.Acta, 1823, 2012
3N30
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BU of 3n30 by Molmil
Crystal Structure of cubic Zn3-hUb (human ubiquitin) adduct
Descriptor: Ubiquitin, ZINC ION
Authors:Siliqi, D, Caliandro, R, Arnesano, F, Natile, G, Falini, G, Fermani, S, Belviso, B.D.
Deposit date:2010-05-19
Release date:2011-01-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystallographic analysis of metal-ion binding to human ubiquitin.
Chemistry, 17, 2011
7M4O
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BU of 7m4o by Molmil
Crystal structure of phosphorylated RBR E3 ligase RNF216 in complex with K63-linked di-ubiquitin
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, E3 ubiquitin-protein ligase RNF216, GLYCEROL, ...
Authors:Cotton, T.R, Lechtenberg, B.C.
Deposit date:2021-03-21
Release date:2022-01-05
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Structural basis of K63-ubiquitin chain formation by the Gordon-Holmes syndrome RBR E3 ubiquitin ligase RNF216.
Mol.Cell, 82, 2022
7M4M
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BU of 7m4m by Molmil
Crystal structure of RBR E3 ligase RNF216 with ubiquitin
Descriptor: E3 ubiquitin-protein ligase RNF216, GLYCEROL, Ubiquitin, ...
Authors:Cotton, T.R, Lechtenberg, B.C.
Deposit date:2021-03-21
Release date:2022-01-05
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Structural basis of K63-ubiquitin chain formation by the Gordon-Holmes syndrome RBR E3 ubiquitin ligase RNF216.
Mol.Cell, 82, 2022
7M4N
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BU of 7m4n by Molmil
Crystal structure of RBR E3 ligase RNF216 in complex with K63-linked di-ubiquitin
Descriptor: E3 ubiquitin-protein ligase RNF216, GLYCEROL, SULFATE ION, ...
Authors:Cotton, T.R, Lechtenberg, B.C.
Deposit date:2021-03-21
Release date:2022-01-05
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Structural basis of K63-ubiquitin chain formation by the Gordon-Holmes syndrome RBR E3 ubiquitin ligase RNF216.
Mol.Cell, 82, 2022
3N32
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BU of 3n32 by Molmil
The crystal structure of human Ubiquitin adduct with Zeise's salt
Descriptor: PLATINUM (II) ION, Ubiquitin
Authors:Siliqi, D, Caliandro, R, Falini, G, Fermani, S, Natile, G, Arnesano, F, Belviso, B.D.
Deposit date:2010-05-19
Release date:2011-01-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.795 Å)
Cite:Crystallographic analysis of metal-ion binding to human ubiquitin.
Chemistry, 17, 2011
1Z2M
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BU of 1z2m by Molmil
Crystal Structure of ISG15, the Interferon-Induced Ubiquitin Cross Reactive Protein
Descriptor: OSMIUM 4+ ION, interferon, alpha-inducible protein (clone IFI-15K)
Authors:Narasimhan, J, Wang, M, Fu, Z, Klein, J.M, Haas, A.L, Kim, J.J.
Deposit date:2005-03-08
Release date:2005-05-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of the Interferon-induced Ubiquitin-like Protein ISG15.
J.Biol.Chem., 280, 2005
1ZKH
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BU of 1zkh by Molmil
Solution structure of a human ubiquitin-like domain in SF3A1
Descriptor: Splicing factor 3 subunit 1
Authors:Lukin, J.A, Dhe-Paganon, S, Guido, V, Lemak, A, Avvakumov, G.V, Xue, S, Newman, E.M, Mackenzie, F, Sundstrom, M, Edwards, A, Arrowsmith, C.H, Structural Genomics Consortium (SGC)
Deposit date:2005-05-02
Release date:2005-05-10
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of a human ubiquitin-like domain in SF3A1
To be Published

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