Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8R1G
DownloadVisualize
BU of 8r1g by Molmil
Dimeric ternary structure of E6AP-E6-p53
Descriptor: Cellular tumor antigen p53, Ubiquitin-like protein SMT3,Protein E6, Ubiquitin-protein ligase E3A, ...
Authors:Sandate, C.R, Chakrabory, D, Kater, L, Kempf, G, Thoma, N.H.
Deposit date:2023-11-01
Release date:2023-12-06
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.99 Å)
Cite:Structural insights into viral hijacking of p53 by E6 and E6AP
Biorxiv, 2023
2YXW
DownloadVisualize
BU of 2yxw by Molmil
The deletion mutant of Multicopper Oxidase CueO
Descriptor: Blue copper oxidase cueO, COPPER (II) ION, CU-O-CU LINKAGE, ...
Authors:Higuchi, Y, Komori, H.
Deposit date:2007-04-27
Release date:2008-01-01
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure and function of the engineered multicopper oxidase CueO from Escherichia coli--deletion of the methionine-rich helical region covering the substrate-binding site
J.Mol.Biol., 373, 2007
8QF2
DownloadVisualize
BU of 8qf2 by Molmil
Beta-L-Arabinofurano-cyclitol Aziridines are Cysteine-directed Broad-spectrum Inhibitors and Activity-based Probes for Retaining Beta-L-arabinofuranosidases
Descriptor: (1~{S},2~{S},3~{S},4~{R})-4-azanyl-3-(hydroxymethyl)cyclopentane-1,2-diol, Non-reducing end beta-L-arabinofuranosidase, ZINC ION
Authors:Borlandelli, V, Offen, W.A, Moroz, O, Nin-Hill, A, McGregor, N, Binkhorst, L, Armstrong, Z, Ishiwata, A, Artola, M, Rovira, C, Davies, G.J, Overkleeft, H.
Deposit date:2023-09-02
Release date:2023-12-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:beta-l- Arabino furano-cyclitol Aziridines Are Covalent Broad-Spectrum Inhibitors and Activity-Based Probes for Retaining beta-l-Arabinofuranosidases.
Acs Chem.Biol., 18, 2023
5JWS
DownloadVisualize
BU of 5jws by Molmil
T4 Lysozyme L99A with 1-Hydro-2-ethyl-1,2-azaborine Bound
Descriptor: 2-ethyl-1,2-dihydro-1,2-azaborinine, CHLORIDE ION, Endolysin
Authors:Lee, H, Fischer, M, Shoichet, B.K, Liu, S.-Y.
Deposit date:2016-05-12
Release date:2016-09-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Hydrogen Bonding of 1,2-Azaborines in the Binding Cavity of T4 Lysozyme Mutants: Structures and Thermodynamics.
J.Am.Chem.Soc., 138, 2016
8QND
DownloadVisualize
BU of 8qnd by Molmil
Crystal structure of the ribonucleoside hydrolase C from Lactobacillus reuteri
Descriptor: CALCIUM ION, Inosine-uridine nucleoside N-ribohydrolase
Authors:Matyuta, I.O, Minyaev, M.E, Shaposhnikov, L.A, Pometun, E.V, Tishkov, V.I, Popov, V.O, Boyko, K.M.
Deposit date:2023-09-26
Release date:2023-12-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-Functional Examination of Novel Ribonucleoside Hydrolase C (RihC) from Limosilactobacillus reuteri LR1.
Int J Mol Sci, 25, 2023
8RGS
DownloadVisualize
BU of 8rgs by Molmil
Serial synchrotron in plate room temperature structure of Dye Type Peroxidase Aa
Descriptor: Deferrochelatase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Thompson, A.J, Hough, M.A, Williams, L.J, Worrall, J.A.R, Sanchez-Weatherby, J, Mikolajek, H, Sandy, J.
Deposit date:2023-12-14
Release date:2023-12-27
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Efficient in situ screening of and data collection from microcrystals in crystallization plates.
Acta Crystallogr D Struct Biol, 80, 2024
5KF6
DownloadVisualize
BU of 5kf6 by Molmil
Structure of proline utilization A from Sinorhizobium meliloti complexed with L-tetrahydrofuroic acid and NAD+ in space group P21
Descriptor: Bifunctional protein PutA, FLAVIN-ADENINE DINUCLEOTIDE, MAGNESIUM ION, ...
Authors:Tanner, J.J.
Deposit date:2016-06-12
Release date:2016-10-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structures of Proline Utilization A (PutA) Reveal the Fold and Functions of the Aldehyde Dehydrogenase Superfamily Domain of Unknown Function.
J.Biol.Chem., 291, 2016
8RGY
DownloadVisualize
BU of 8rgy by Molmil
Serial synchrotron in plate room temperature structure of Dye Type Peroxidase Aa, 8 drops merged
Descriptor: Deferrochelatase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Thompson, A.J, Hough, M.A, Williams, L.J, Worrall, J.A.R, Sanchez-Weatherby, J, Mikolajek, H, Sandy, J.
Deposit date:2023-12-14
Release date:2023-12-27
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Efficient in situ screening of and data collection from microcrystals in crystallization plates.
Acta Crystallogr D Struct Biol, 80, 2024
8RGW
DownloadVisualize
BU of 8rgw by Molmil
Serial synchrotron in plate room temperature structure of Dye Type Peroxidase Aa, 12 drops merged
Descriptor: Deferrochelatase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Thompson, A.J, Hough, M.A, Williams, L.J, Worrall, J.A.R, Sanchez-Weatherby, J, Mikolajek, H, Sandy, J.
Deposit date:2023-12-14
Release date:2023-12-27
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Efficient in situ screening of and data collection from microcrystals in crystallization plates.
Acta Crystallogr D Struct Biol, 80, 2024
8Q7Y
DownloadVisualize
BU of 8q7y by Molmil
ESIBD structure of beta-galactosidase
Descriptor: Beta-galactosidase
Authors:Esser, T, Boehning, J, Bharat, T.A.M, Rauschenbach, S.
Deposit date:2023-08-17
Release date:2024-01-10
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Cryo-EM of soft-landed beta-galactosidase: Gas-phase and native structures are remarkably similar.
Sci Adv, 10, 2024
5KAH
DownloadVisualize
BU of 5kah by Molmil
Crystal structure of a dioxygenase in the Crotonase superfamily in P21, V425T mutant
Descriptor: (3,5-dihydroxyphenyl)acetyl-CoA 1,2-dioxygenase, [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL (3R)-4-({3-[(2-{[(3,5-DIHYDROXYPHENYL)ACETYL]AMINO}ETHYL)AMINO]-3-OXOPROPYL}AMINO)-3-HYDROXY-2,2-DIMETHYL-4-OXOBUTYL DIHYDROGEN DIPHOSPHATE
Authors:Li, K, Fielding, E.N, Condurso, H.L, Bruner, S.D.
Deposit date:2016-06-01
Release date:2017-06-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.779 Å)
Cite:Probing the structural basis of oxygen binding in a cofactor-independent dioxygenase.
Acta Crystallogr D Struct Biol, 73, 2017
8R37
DownloadVisualize
BU of 8r37 by Molmil
Klebsiella pneumoniae fosfomycin-resistance protein (FosAKP)
Descriptor: FOSFOMYCIN, FosA family fosfomycin resistance glutathione transferase, L(+)-TARTARIC ACID, ...
Authors:Papageorgiou, A.C, Varotsou, C, Labrou, N.E.
Deposit date:2023-11-08
Release date:2024-01-24
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Structural Studies of Klebsiella pneumoniae Fosfomycin-Resistance Protein and Its Application for the Development of an Optical Biosensor for Fosfomycin Determination.
Int J Mol Sci, 25, 2023
5KDY
DownloadVisualize
BU of 5kdy by Molmil
The crystal structure of the D251N mutant of CYP199A4 in complex with 4-methoxybenzoate
Descriptor: 4-METHOXYBENZOIC ACID, CHLORIDE ION, Cytochrome P450, ...
Authors:Coleman, T, Bruning, J.B, Bell, S.G.
Deposit date:2016-06-08
Release date:2018-02-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.589 Å)
Cite:The crystal structure of the D251N mutant of CYP199A4 in complex with 4-methoxybenzoate
To Be Published
5KF0
DownloadVisualize
BU of 5kf0 by Molmil
Crystal structure of an Aldedhyde dehydrogenase from Burkholderia vietnamiensis
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2016-06-10
Release date:2016-11-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of an Aldedhyde dehydrogenase from Burkholderia vietnamiensis
to be published
8QNN
DownloadVisualize
BU of 8qnn by Molmil
Crystal structure of a Class A beta-lactamase from Nocardia cyriacigeorgica
Descriptor: Beta-lactamase, CITRATE ANION
Authors:Feuillard, J, Couston, J, Benito, Y, Hodille, E, Dumitrescu, O, Blaise, M.
Deposit date:2023-09-27
Release date:2024-01-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Biochemical and structural characterization of a class A beta-lactamase from Nocardia cyriacigeorgica.
Acta Crystallogr.,Sect.F, 80, 2024
5JOZ
DownloadVisualize
BU of 5joz by Molmil
Bacteroides ovatus Xyloglucan PUL GH43B
Descriptor: CALCIUM ION, Non-reducing end alpha-L-arabinofuranosidase BoGH43B
Authors:Hemsworth, G.R, Thompson, A.J, Stepper, J, Sobala, L.F, Coyle, T, Larsbrink, J, Spadiut, O, Stubbs, K.A, Brumer, H, Davies, G.J.
Deposit date:2016-05-03
Release date:2016-08-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Structural dissection of a complex Bacteroides ovatus gene locus conferring xyloglucan metabolism in the human gut.
Open Biology, 6, 2016
7JPP
DownloadVisualize
BU of 7jpp by Molmil
ORC-O2WH: Human Origin Recognition Complex (ORC) with dynamic/unresolved ORC1 AAA+ domain
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Origin recognition complex subunit 1, ...
Authors:Jaremko, M.J, Joshua-Tor, L.
Deposit date:2020-08-09
Release date:2020-09-09
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:The dynamic nature of the human Origin Recognition Complex revealed through five cryoEM structures.
Elife, 9, 2020
5K12
DownloadVisualize
BU of 5k12 by Molmil
Cryo-EM structure of glutamate dehydrogenase at 1.8 A resolution
Descriptor: Glutamate dehydrogenase 1, mitochondrial
Authors:Merk, A, Bartesaghi, A, Banerjee, S, Falconieri, V, Rao, P, Earl, L, Milne, J, Subramaniam, S.
Deposit date:2016-05-17
Release date:2016-06-08
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (1.8 Å)
Cite:Breaking Cryo-EM Resolution Barriers to Facilitate Drug Discovery.
Cell, 165, 2016
5K2N
DownloadVisualize
BU of 5k2n by Molmil
lysozyme with nano particles
Descriptor: Lysozyme C
Authors:Ko, S, Choe, J.
Deposit date:2016-05-19
Release date:2017-05-31
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal Structure of Lysozyme
To Be Published
5K3J
DownloadVisualize
BU of 5k3j by Molmil
Crystals structure of Acyl-CoA oxidase-2 in Caenorhabditis elegans bound with FAD, ascaroside-CoA, and ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Acyl-coenzyme A oxidase, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Zhang, X, Li, K, Jones, R.A, Bruner, S.D, Butcher, R.A.
Deposit date:2016-05-19
Release date:2016-08-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Structural characterization of acyl-CoA oxidases reveals a direct link between pheromone biosynthesis and metabolic state in Caenorhabditis elegans.
Proc.Natl.Acad.Sci.USA, 113, 2016
5K7O
DownloadVisualize
BU of 5k7o by Molmil
MicroED structure of lysozyme at 1.8 A resolution
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:de la Cruz, M.J, Hattne, J, Shi, D, Seidler, P, Rodriguez, J, Reyes, F.E, Sawaya, M.R, Cascio, D, Eisenberg, D, Gonen, T.
Deposit date:2016-05-26
Release date:2017-04-05
Last modified:2018-08-22
Method:ELECTRON CRYSTALLOGRAPHY (1.8 Å)
Cite:Atomic-resolution structures from fragmented protein crystals with the cryoEM method MicroED.
Nat. Methods, 14, 2017
8RF8
DownloadVisualize
BU of 8rf8 by Molmil
Crystal structure of N-terminal SARS-CoV-2 nsp1 in complex with fragment hit 11A7_AL6 refined against the anomalous diffraction data
Descriptor: 6-bromanyl-1,3-benzothiazol-2-amine, Host translation inhibitor nsp1
Authors:Ma, S, Damfo, S, Mykhaylyk, V, Kozielski, F.
Deposit date:2023-12-12
Release date:2024-06-19
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:High-confidence placement of low-occupancy fragments into electron density using the anomalous signal of sulfur and halogen atoms.
Acta Crystallogr D Struct Biol, 80, 2024
8RCO
DownloadVisualize
BU of 8rco by Molmil
Structure of Human Serum Albumin in complex with Aristolochic Acid II at 1.9 A resolution
Descriptor: 1,2-ETHANEDIOL, 6-nitronaphtho[1,2-e][1,3]benzodioxole-5-carboxylic acid, MYRISTIC ACID, ...
Authors:Pomyalov, S, Sidorenko, V.S, Grollman, A.P, Shoham, G.
Deposit date:2023-12-06
Release date:2024-06-26
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and mechanistic insights into the transport of aristolochic acids and their active metabolites by human serum albumin.
J.Biol.Chem., 300, 2024
5JWW
DownloadVisualize
BU of 5jww by Molmil
T4 Lysozyme L99A/M102Q with 1-Hydro-2-ethyl-1,2-azaborine Bound
Descriptor: 2-ethyl-1,2-dihydro-1,2-azaborinine, CHLORIDE ION, Endolysin
Authors:Lee, H, Fischer, M, Shoichet, B.K, Liu, S.-Y.
Deposit date:2016-05-12
Release date:2016-09-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Hydrogen Bonding of 1,2-Azaborines in the Binding Cavity of T4 Lysozyme Mutants: Structures and Thermodynamics.
J.Am.Chem.Soc., 138, 2016
8RCP
DownloadVisualize
BU of 8rcp by Molmil
Structure of Human Serum Albumin in complex with Myristic Acid
Descriptor: 1,2-ETHANEDIOL, MYRISTIC ACID, Serum albumin
Authors:Pomyalov, S, Sidorenko, V.S, Grollman, A.P, Shoham, G.
Deposit date:2023-12-06
Release date:2024-06-26
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and mechanistic insights into the transport of aristolochic acids and their active metabolites by human serum albumin.
J.Biol.Chem., 300, 2024

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon