PDB: 52540 resultsInfo pagesStatus searchChemie searchBIRD

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8UQE	Crystal structure of RNF168 (RING)-UbcH5c fused to H2A-H2B via a 26-residue linker (RING not modeled in density) Descriptor: E3 ubiquitin-protein ligase RNF168,Ubiquitin-conjugating enzyme E2 D3,Histone H2B type 2-E,Histone H2A type 1-B/E Authors: Hu, Q, Botuyan, M.V, Mer, G. Deposit date: 2023-10-23 Release date: 2024-01-17 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (3.562 Å) Cite: Mechanisms of RNF168 nucleosome recognition and ubiquitylation. Mol.Cell, 84, 2024
8UQA	Crystal structure of RNF168 (RING)-UbcH5c fused to H2A-H2B via a 12-residue linker Descriptor: CHLORIDE ION, E3 ubiquitin-protein ligase RNF168,Ubiquitin-conjugating enzyme E2 D3,Histone H2B type 2-E,Histone H2A type 1-B/E, SODIUM ION, ... Authors: Hu, Q, Botuyan, M.V, Mer, G. Deposit date: 2023-10-23 Release date: 2024-01-17 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.049 Å) Cite: Mechanisms of RNF168 nucleosome recognition and ubiquitylation. Mol.Cell, 84, 2024
8UQB	Crystal structure of RNF168 (RING)-UbcH5c fused to H2A-H2B via a 20-residue linker (crystallization condition 1) Descriptor: CHLORIDE ION, E3 ubiquitin-protein ligase RNF168,Ubiquitin-conjugating enzyme E2 D3,Histone H2B type 2-E,Histone H2A type 1-B/E, ZINC ION Authors: Hu, Q, Botuyan, M.V, Mer, G. Deposit date: 2023-10-23 Release date: 2024-01-17 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.484 Å) Cite: Mechanisms of RNF168 nucleosome recognition and ubiquitylation. Mol.Cell, 84, 2024
8UQ9	Crystal structure of RNF168 (RING)-UbcH5c fused to H2A-H2B via a 4-residue linker Descriptor: CHLORIDE ION, E3 ubiquitin-protein ligase RNF168,Ubiquitin-conjugating enzyme E2 D3,Histone H2B type 2-E,Histone H2A type 1-B/E, GLYCEROL, ... Authors: Hu, Q, Botuyan, M.V, Mer, G. Deposit date: 2023-10-23 Release date: 2024-01-17 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Mechanisms of RNF168 nucleosome recognition and ubiquitylation. Mol.Cell, 84, 2024
8UQ8	Crystal structure of RNF168 (RING)-UbcH5c fused to H2A-H2B via a 2-residue linker Descriptor: CHLORIDE ION, E3 ubiquitin-protein ligase RNF168,Ubiquitin-conjugating enzyme E2 D3,Histone H2B type 2-E,Histone H2A type 1-B/E, GLYCEROL, ... Authors: Hu, Q, Botuyan, M.V, Mer, G. Deposit date: 2023-10-23 Release date: 2024-01-17 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.34 Å) Cite: Mechanisms of RNF168 nucleosome recognition and ubiquitylation. Mol.Cell, 84, 2024
8UQD	Crystal structure of RNF168 (RING)-UbcH5c fused to H2A-H2B via a 20-residue linker (condition 2. RING not modeled in density) Descriptor: E3 ubiquitin-protein ligase RNF168,Ubiquitin-conjugating enzyme E2 D3,Histone H2B type 2-E,Histone H2A type 1-B/E Authors: Hu, Q, Botuyan, M.V, Mer, G. Deposit date: 2023-10-23 Release date: 2024-01-17 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (3.893 Å) Cite: Mechanisms of RNF168 nucleosome recognition and ubiquitylation. Mol.Cell, 84, 2024
8UQC	Crystal structure of RNF168 (RING)-UbcH5c fused to H2A-H2B via a 20-residue linker (crystallization condition 2) Descriptor: E3 ubiquitin-protein ligase RNF168,Ubiquitin-conjugating enzyme E2 D3,Histone H2B type 2-E,Histone H2A type 1-B/E, ZINC ION Authors: Hu, Q, Botuyan, M.V, Mer, G. Deposit date: 2023-10-23 Release date: 2024-01-17 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.61 Å) Cite: Mechanisms of RNF168 nucleosome recognition and ubiquitylation. Mol.Cell, 84, 2024
8TIM	TRIOSE PHOSPHATE ISOMERASE Descriptor: SULFATE ION, TRIOSE PHOSPHATE ISOMERASE Authors: Artymiuk, P.J, Taylor, W.R, Phillips, D.C. Deposit date: 1998-08-25 Release date: 1999-02-16 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Triose Phosphate Isomerase To be Published
8SW0	Puromycin sensitive aminopeptidase Descriptor: 1,4-DIETHYLENE DIOXIDE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Puromycin-sensitive aminopeptidase, ... Authors: Rodgers, D.W, Sampath, S. Deposit date: 2023-05-17 Release date: 2023-07-26 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (2.301 Å) Cite: Structure of puromycin-sensitive aminopeptidase and polyglutamine binding. Plos One, 18, 2023
8VIJ	Crystal structure of Shewanella benthica Group 1 truncated hemoglobin Y34F C51S C71S variant (cyanomet) Descriptor: CYANIDE ION, Group 1 truncated hemoglobin, PROTOPORPHYRIN IX CONTAINING FE Authors: Lecomte, J.T.J, Schlessman, J.L, Martinez, J.E, Schultz, T.D, Siegler, M.A, DelCampo, M, Le Magueres, P. Deposit date: 2024-01-04 Release date: 2024-04-03 Method: X-RAY DIFFRACTION (1.35 Å) Cite: Crystal structure of Shewanella benthica Group 1 truncated hemoglobin Y34F C51S C71S variant in the cyanomet state To be published
8VK2	X-ray crystal structure of human IgE 4C8 Fab Descriptor: IgE 4C8 heavy chain, IgE 4C8 light chain Authors: Khatri, K, Ball, A, Smith, S.A, Champan, M.D, Pomes, A, Chruszcz, M. Deposit date: 2024-01-08 Release date: 2024-06-19 Last modified: 2024-08-21 Method: X-RAY DIFFRACTION (2.508 Å) Cite: Structural analysis of human IgE monoclonal antibody epitopes on dust mite allergen Der p 2. J.Allergy Clin.Immunol., 154, 2024
8VK1	X-ray crystal structure of human IgE 4C8 Fab complex with Der p 2.0103 Descriptor: Der p 2 variant 3, IgE 4C8 heavy chain, IgE 4C8 light chain Authors: Khatri, K, Ball, A, Smith, S.A, Champan, M.D, Pomes, A, Chruszcz, M. Deposit date: 2024-01-08 Release date: 2024-06-19 Last modified: 2024-08-21 Method: X-RAY DIFFRACTION (3.05 Å) Cite: Structural analysis of human IgE monoclonal antibody epitopes on dust mite allergen Der p 2. J.Allergy Clin.Immunol., 154, 2024
7ENN	The structure of ALC1 bound to the nucleosome Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Chromodomain-helicase-DNA-binding protein 1-like, ... Authors: Chen, Z.C, Chen, K.J, Wang, L. Deposit date: 2021-04-18 Release date: 2021-07-14 Method: ELECTRON MICROSCOPY (2.8 Å) Cite: Structural basis of ALC1/CHD1L autoinhibition and the mechanism of activation by the nucleosome. Nat Commun, 12, 2021
7EPC	Cryo-EM structure of inactive mGlu7 homodimer Descriptor: Isoform 3 of Metabotropic glutamate receptor 7 Authors: Du, J, Wang, D, Fan, H, Tai, L, Lin, S, Han, S, Sun, F, Wu, B, Zhao, Q. Deposit date: 2021-04-26 Release date: 2021-06-23 Last modified: 2021-07-07 Method: ELECTRON MICROSCOPY (4 Å) Cite: Structures of human mGlu2 and mGlu7 homo- and heterodimers. Nature, 594, 2021
7EPB	Cryo-EM structure of LY354740-bound mGlu2 homodimer Descriptor: (1S,2S,5R,6S)-2-aminobicyclo[3.1.0]hexane-2,6-dicarboxylic acid, Anti-RON nanobody, Metabotropic glutamate receptor 2 Authors: Du, J, Wang, D, Fan, H, Tai, L, Lin, S, Han, S, Sun, F, Wu, B, Zhao, Q. Deposit date: 2021-04-26 Release date: 2021-06-23 Last modified: 2021-07-07 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Structures of human mGlu2 and mGlu7 homo- and heterodimers. Nature, 594, 2021
7EPA	Cryo-EM structure of inactive mGlu2 homodimer Descriptor: Metabotropic glutamate receptor 2 Authors: Du, J, Wang, D, Fan, H, Tai, L, Lin, S, Han, S, Sun, F, Wu, B, Zhao, Q. Deposit date: 2021-04-26 Release date: 2021-06-23 Last modified: 2021-07-07 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Structures of human mGlu2 and mGlu7 homo- and heterodimers. Nature, 594, 2021
7EPD	Cryo-EM structure of inactive mGlu2-7 heterodimer Descriptor: Isoform 3 of Metabotropic glutamate receptor 7, Metabotropic glutamate receptor 2,Peptidylprolyl isomerase Authors: Du, J, Wang, D, Fan, H, Tai, L, Lin, S, Han, S, Sun, F, Wu, B, Zhao, Q. Deposit date: 2021-04-26 Release date: 2021-06-23 Last modified: 2021-07-07 Method: ELECTRON MICROSCOPY (3.9 Å) Cite: Structures of human mGlu2 and mGlu7 homo- and heterodimers. Nature, 594, 2021
7EPU	Crystal structure of HsALC1 Descriptor: ADENOSINE-5'-DIPHOSPHATE, Chromodomain-helicase-DNA-binding protein 1-like, MAGNESIUM ION, ... Authors: Wang, L, Chen, K.J. Deposit date: 2021-04-27 Release date: 2021-07-14 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (3.5 Å) Cite: Structural basis of ALC1/CHD1L autoinhibition and the mechanism of activation by the nucleosome. Nat Commun, 12, 2021
7EXP	Crystal structure of zebrafish TRAP1 with AMPPNP and MitoQ Descriptor: 2,3-dimethoxy-5-methyl-6-[10-(triphenyl-$l^{5}-phosphanyl)decyl]cyclohexa-2,5-diene-1,4-dione, COBALT (II) ION, MAGNESIUM ION, ... Authors: Lee, H, Yoon, N.G, Kang, B.H, Lee, C. Deposit date: 2021-05-28 Release date: 2022-01-05 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.297 Å) Cite: Mitoquinone Inactivates Mitochondrial Chaperone TRAP1 by Blocking the Client Binding Site. J.Am.Chem.Soc., 143, 2021
7F50	X-ray crystal structure of Y149A mutated Hsp72-NBD in complex with AMPPnP Descriptor: CHLORIDE ION, Heat shock 70 kDa protein 1B, MAGNESIUM ION, ... Authors: Yokoyama, T, Fujii, S, Nabeshima, Y, Mizuguchi, M. Deposit date: 2021-06-21 Release date: 2022-06-29 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.703 Å) Cite: Neutron crystallographic analysis of the nucleotide-binding domain of Hsp72 in complex with ADP. Iucrj, 9, 2022
7EST	Interaction of the peptide CF3-LEU-ALA-NH-C6H4-CF3(TFLA) with porcine pancreatic elastase. X-ray studies at 1.8 Angstroms Descriptor: CALCIUM ION, DIMETHYLFORMAMIDE, ELASTASE, ... Authors: Li De Lasierra, I, Prange, T. Deposit date: 1990-06-15 Release date: 1991-10-15 Last modified: 2023-08-09 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Interaction of the peptide CF3-Leu-Ala-NH-C6H4-CF3 (TFLA) with porcine pancreatic elastase. X-ray studies at 1.8 A. J.Mol.Recog., 3, 1990
7EDZ	Crystal Structure of human PPCS in complex with P-HoPan and AMPPNP Descriptor: 4-[[(2R)-3,3-dimethyl-2-oxidanyl-4-phosphonooxy-butanoyl]amino]butanoic acid, GLYCEROL, MAGNESIUM ION, ... Authors: Sharma, N, Mostert, K.J, Strauss, E, Anand, R. Deposit date: 2021-03-17 Release date: 2021-11-24 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.95 Å) Cite: The Coenzyme A Level Modulator Hopantenate (HoPan) Inhibits Phosphopantotenoylcysteine Synthetase Activity. Acs Chem.Biol., 16, 2021
7DRN	Structure of ATP-grasp ligase PsnB complexed with precursor peptide PsnA2 and AMPPNP Descriptor: ATP-grasp domain-containing protein, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, PsnA214-38, ... Authors: Song, I, Yu, J, Song, W, Kim, S. Deposit date: 2020-12-29 Release date: 2021-09-08 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (3.56 Å) Cite: Molecular mechanism underlying substrate recognition of the peptide macrocyclase PsnB. Nat.Chem.Biol., 17, 2021
2FRZ	Crystal Structure of Cytochrome P450cam mutant (F87W/Y96F/V247L/C334A) Descriptor: Cytochrome P450-cam, POTASSIUM ION, PROTOPORPHYRIN IX CONTAINING FE Authors: Rao, Z, Wong, L.L, Xu, F, Bell, S.G. Deposit date: 2006-01-20 Release date: 2007-01-16 Last modified: 2024-05-29 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Pentachlorobenzene oxidation by engineered cytochrome P450cam: Substrate binding and the mechanism of aromatic C-H bond oxidation To be Published
2XXU	Crystal structure of the GluK2 (GluR6) M770K LBD dimer in complex with glutamate Descriptor: CHLORIDE ION, GLUTAMATE RECEPTOR, IONOTROPIC KAINATE 2, ... Authors: Nayeem, N, Mayans, O, Green, T. Deposit date: 2010-11-12 Release date: 2011-02-09 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Conformational Flexibility of the Ligand-Binding Domain Dimer in Kainate Receptor Gating and Desensitization J.Neurosci., 31, 2011

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