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8BB1
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BU of 8bb1 by Molmil
T3 SAM lyase in complex with S-adenosylmethionine synthase
Descriptor: CHLORIDE ION, S-Adenosylmethionine lyase, S-adenosylmethionine synthase
Authors:Triguis, S, Selmer, M.
Deposit date:2022-10-12
Release date:2023-08-23
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Phage T3 overcomes the BREX defense through SAM cleavage and inhibition of SAM synthesis by SAM lyase.
Cell Rep, 42, 2023
1B6R
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BU of 1b6r by Molmil
N5-CARBOXYAMINOIMIDAZOLE RIBONUCLEOTIDE SYNTHETASE FROM E. COLI
Descriptor: PROTEIN (N5-CARBOXYAMINOIMIDAZOLE RIBONUCLEOTIDE SYNTHETASE), SULFATE ION
Authors:Thoden, J.B, Kappock, T.J, Stubbe, J, Holden, H.M.
Deposit date:1999-01-17
Release date:1999-11-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Three-dimensional structure of N5-carboxyaminoimidazole ribonucleotide synthetase: a member of the ATP grasp protein superfamily.
Biochemistry, 38, 1999
1VCM
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BU of 1vcm by Molmil
Crystal Structure of T.th. HB8 CTP synthetase
Descriptor: CTP synthetase
Authors:Goto, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-03-10
Release date:2004-08-31
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal Structures of CTP Synthetase Reveal ATP, UTP, and Glutamine Binding Sites
Structure, 12, 2004
1VCN
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BU of 1vcn by Molmil
Crystal Structure of T.th. HB8 CTP synthetase complex with Sulfate anion
Descriptor: CTP synthetase, SULFATE ION
Authors:Goto, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-03-10
Release date:2004-08-31
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal Structures of CTP Synthetase Reveal ATP, UTP, and Glutamine Binding Sites
Structure, 12, 2004
6JIG
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BU of 6jig by Molmil
Crystal structure of GMP reductase C318A from Trypanosoma brucei in complex with guanosine 5'-monophosphate
Descriptor: GMP reductase, GUANOSINE-5'-MONOPHOSPHATE, POTASSIUM ION
Authors:Mase, H, Imamura, A, Nishimura, S, Inui, T.
Deposit date:2019-02-21
Release date:2020-02-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.903 Å)
Cite:Allosteric regulation accompanied by oligomeric state changes of Trypanosoma brucei GMP reductase through cystathionine-beta-synthase domain.
Nat Commun, 11, 2020
6JL8
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BU of 6jl8 by Molmil
Crystal structure of GMP reductase C318A from Trypanosoma brucei
Descriptor: GMP reductase
Authors:Mase, H, Imamura, A, Nishimura, S, Inui, T.
Deposit date:2019-03-04
Release date:2020-03-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.804 Å)
Cite:Allosteric regulation accompanied by oligomeric state changes of Trypanosoma brucei GMP reductase through cystathionine-beta-synthase domain.
Nat Commun, 11, 2020
3KEW
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BU of 3kew by Molmil
Crystal structure of probable alanyl-trna-synthase from Clostridium perfringens
Descriptor: DHHA1 domain protein, ZINC ION
Authors:Patskovsky, Y, Toro, R, Gilmore, M, Miller, S, Sauder, J.M, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-10-26
Release date:2009-11-03
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of alanyl-trna-synthase from Clostridium perfringens
To be Published
4YXJ
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BU of 4yxj by Molmil
Structure of Thermotoga maritima DisA in complex with ApCpp
Descriptor: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, DNA integrity scanning protein DisA
Authors:Mueller, M, Deimling, T, Hopfner, K.-P, Witte, G.
Deposit date:2015-03-23
Release date:2015-06-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural analysis of the diadenylate cyclase reaction of DNA-integrity scanning protein A (DisA) and its inhibition by 3'-dATP.
Biochem.J., 469, 2015
1A82
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BU of 1a82 by Molmil
DETHIOBIOTIN SYNTHETASE FROM ESCHERICHIA COLI, COMPLEX WITH SUBSTRATES ATP AND DIAMINOPELARGONIC ACID
Descriptor: 7,8-DIAMINO-NONANOIC ACID, ADENOSINE-5'-TRIPHOSPHATE, DETHIOBIOTIN SYNTHETASE, ...
Authors:Kaeck, H, Gibson, K.J, Lindqvist, Y, Schneider, G.
Deposit date:1998-03-31
Release date:1999-05-11
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Snapshot of a phosphorylated substrate intermediate by kinetic crystallography.
Proc.Natl.Acad.Sci.USA, 95, 1998
4YXM
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BU of 4yxm by Molmil
Structure of Thermotoga maritima DisA D75N mutant with reaction product c-di-AMP
Descriptor: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, (4S)-2-METHYL-2,4-PENTANEDIOL, DNA integrity scanning protein DisA
Authors:Mueller, M, Deimling, T, Hopfner, K.-P, Witte, G.
Deposit date:2015-03-23
Release date:2015-06-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural analysis of the diadenylate cyclase reaction of DNA-integrity scanning protein A (DisA) and its inhibition by 3'-dATP.
Biochem.J., 469, 2015
7UXW
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BU of 7uxw by Molmil
Structure of ATP and GTP bind to Cyclic GMP AMP synthase (cGAS) through Mg coordination
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cyclic GMP-AMP synthase, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Wu, S, Gabelli, S.B, Sohn, J.
Deposit date:2022-05-06
Release date:2023-05-10
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:The structural basis for 2'-5'/3'-5'-cGAMP synthesis by cGAS
Nat Commun, 15, 2024
4YCW
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BU of 4ycw by Molmil
Crystal structure of cladosporin in complex with plasmodium like human lysyl-tRNA synthetase mutant
Descriptor: Aminoacyl tRNA synthase complex-interacting multifunctional protein 2, LYSINE, Lysine--tRNA ligase, ...
Authors:Fang, P, Wang, J, Guo, M.
Deposit date:2015-02-20
Release date:2015-06-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural Basis for Specific Inhibition of tRNA Synthetase by ATP Competitive Inhibitor
Chem.Biol., 22, 2015
4HPV
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BU of 4hpv by Molmil
Crystal structure of S-Adenosylmethionine synthetase from Sulfolobus solfataricus
Descriptor: S-adenosylmethionine synthase
Authors:Wang, F, Hurley, K.A, Helmich, K.E, Singh, S, Bingman, C.A, Thorson, J.S, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2012-10-24
Release date:2012-11-14
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.214 Å)
Cite:Understanding molecular recognition of promiscuity of thermophilic methionine adenosyltransferase sMAT from Sulfolobus solfataricus.
Febs J., 281, 2014
5GMD
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BU of 5gmd by Molmil
Crystal structure of Sulfolobus solfataricus diphosphomevalonate decarboxylase in complex with ATP-gamma-S
Descriptor: (3R)-3-HYDROXY-5-{[(R)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}-3-METHYLPENTANOIC ACID, ADENOSINE MONOPHOSPHATE, Diphosphomevalonate decarboxylase, ...
Authors:Unno, H, Hemmi, H, Hattori, A.
Deposit date:2016-07-13
Release date:2016-12-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A Single Amino Acid Mutation Converts (R)-5-Diphosphomevalonate Decarboxylase into a Kinase
J. Biol. Chem., 292, 2017
6E0O
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BU of 6e0o by Molmil
Structure of Elizabethkingia meningoseptica CdnE cyclic dinucleotide synthase with pppA[3'-5']pA
Descriptor: MAGNESIUM ION, RNA (5'-D(*(ATP))-R(P*A)-3'), cGAS/DncV-like nucleotidyltransferase in E. coli homolog
Authors:Eaglesham, J.B, Whiteley, A.T, de Oliveira Mann, C.C, Morehouse, B.R, Nieminen, E.A, King, D.S, Lee, A.S.Y, Mekalanos, J.J, Kranzusch, P.J.
Deposit date:2018-07-06
Release date:2019-02-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Bacterial cGAS-like enzymes synthesize diverse nucleotide signals.
Nature, 567, 2019
1B76
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BU of 1b76 by Molmil
GLYCYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED WITH ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Glycine--tRNA ligase
Authors:Arnez, J.G, Moras, D.
Deposit date:1999-01-27
Release date:1999-01-28
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Glycyl-tRNA synthetase uses a negatively charged pit for specific recognition and activation of glycine.
J.Mol.Biol., 286, 1999
4NPH
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BU of 4nph by Molmil
Crystal structure of SsaN from Salmonella enterica
Descriptor: Probable secretion system apparatus ATP synthase SsaN
Authors:Sugiman-Marangos, S.N, Zhang, K, Cooper, C.A, Coombes, B.K, Junop, M.S.
Deposit date:2013-11-21
Release date:2014-07-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Crystal structure of SsaN from Salmonella enterica
J.Biol.Chem., 2014
3FPA
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BU of 3fpa by Molmil
Crystal structure of Mycobacterium tuberculosis dethiobiotin synthetase complexed with dethiobiotin and phosphate
Descriptor: 6-(5-METHYL-2-OXO-IMIDAZOLIDIN-4-YL)-HEXANOIC ACID, Dethiobiotin synthetase, MAGNESIUM ION, ...
Authors:Dey, S, Sacchettini, J.C.
Deposit date:2009-01-04
Release date:2009-06-30
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural characterization of the Mycobacterium tuberculosis biotin biosynthesis enzymes 7,8-diaminopelargonic acid synthase and dethiobiotin synthetase.
Biochemistry, 49, 2010
8SJ2
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BU of 8sj2 by Molmil
Structure of ternary complex of cGAS with dsDNA and bound ATP and 2'-dGTP
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cyclic GMP-AMP synthase, ...
Authors:Wu, S, Sohn, J.
Deposit date:2023-04-17
Release date:2024-04-24
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:The structural basis for 2'-5'/3'-5'-cGAMP synthesis by cGAS.
Nat Commun, 15, 2024
8SHY
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BU of 8shy by Molmil
Structure of binary complex of mouse cGAS QN and bound ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cyclic GMP-AMP synthase, ZINC ION
Authors:Wu, S, Sohn, J.
Deposit date:2023-04-14
Release date:2024-04-24
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:The structural basis for 2'-5'/3'-5'-cGAMP synthesis by cGAS.
Nat Commun, 15, 2024
8SHK
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BU of 8shk by Molmil
Structure of binary complex of mouse cGAS and bound ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cyclic GMP-AMP synthase, ZINC ION
Authors:Wu, S, Sohn, J.
Deposit date:2023-04-14
Release date:2024-04-24
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:The structural basis for 2'-5'/3'-5'-cGAMP synthesis by cGAS.
Nat Commun, 15, 2024
3FGN
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BU of 3fgn by Molmil
Crystal structure of dethiobiotin synthetase in Mycobacterium tuberculosis
Descriptor: Dethiobiotin synthetase
Authors:Dey, S, Sacchettini, J.C.
Deposit date:2008-12-08
Release date:2009-06-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural characterization of the Mycobacterium tuberculosis biotin biosynthesis enzymes 7,8-diaminopelargonic acid synthase and dethiobiotin synthetase .
Biochemistry, 49, 2010
2NZ2
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BU of 2nz2 by Molmil
Crystal structure of human argininosuccinate synthase in complex with aspartate and citrulline
Descriptor: ASPARTIC ACID, Argininosuccinate synthase, CITRULLINE, ...
Authors:Karlberg, T, Uppenberg, J, Arrowsmith, C, Berglund, H, Busam, R.D, Collins, R, Edwards, A, Ericsson, U.B, Flodin, S, Flores, A, Graslund, S, Hallberg, B.M, Hammarstrom, M, Hogbom, M, Johansson, I, Kotenyova, T, Magnusdottir, A, Moche, M, Nilsson, M.E, Nordlund, P, Nyman, T, Ogg, D, Persson, C, Sagemark, J, Stenmark, P, Sundstrom, M, Thorsell, A.G, Van Den Berg, S, Wallden, K, Weigelt, J, Holmberg-Schiavone, L, Structural Genomics Consortium (SGC)
Deposit date:2006-11-22
Release date:2006-12-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of human argininosuccinate synthetase.
Acta Crystallogr.,Sect.D, 64, 2008
5TT5
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BU of 5tt5 by Molmil
Escherichia coli LigA (K115M) in complex with NAD+
Descriptor: DNA ligase, MAGNESIUM ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Goldgur, Y, Unciuleac, M.-C, Shuman, S.H.
Deposit date:2016-11-01
Release date:2017-03-08
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.552 Å)
Cite:Two-metal versus one-metal mechanisms of lysine adenylylation by ATP-dependent and NAD(+)-dependent polynucleotide ligases.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
7TQD
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BU of 7tqd by Molmil
Structure of Enterobacter cloacae Cap2-CdnD02 2:1 complex
Descriptor: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Gu, Y, Ye, Q, Ledvina, H.E, Quan, Y, Lau, R.K, Zhou, H, Whiteley, A.T, Corbett, K.D.
Deposit date:2022-01-26
Release date:2023-01-11
Last modified:2023-04-26
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:An E1-E2 fusion protein primes antiviral immune signalling in bacteria.
Nature, 616, 2023

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