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2RN7
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BU of 2rn7 by Molmil
NMR solution structure of TnpE protein from Shigella flexneri. Northeast Structural Genomics Target SfR125
Descriptor: IS629 orfA
Authors:Ramelot, T.A, Cort, J.R, Semesi, A, Garcia, M, Yee, A.A, Arrowsmith, C.H, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG)
Deposit date:2007-12-08
Release date:2008-01-15
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:NMR solution structure of TnpE protein from Shigella flexneri. Northeast Structural Genomics Target SfR125
To be Published
2RNZ
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BU of 2rnz by Molmil
Solution structure of the presumed chromodomain of the yeast histone acetyltransferase, Esa1
Descriptor: Histone acetyltransferase ESA1
Authors:Shimojo, H, Sano, N, Moriwaki, Y, Okuda, M, Horikoshi, M, Nishimura, Y.
Deposit date:2008-03-01
Release date:2008-04-29
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Novel structural and functional mode of a knot essential for RNA binding activity of the Esa1 presumed chromodomain
J.Mol.Biol., 378, 2008
2GZ4
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BU of 2gz4 by Molmil
1.5 A Crystal Structure of a Protein of Unknown Function ATU1052 from Agrobacterium tumefaciens
Descriptor: Hypothetical protein Atu1052
Authors:Zhang, R, Xu, X, Zheng, H, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-05-10
Release date:2006-06-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:1.5A crystal structure of a hypothetical protein Atu1052 from Agrobacterium tumefaciens
To be Published
2H2Z
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BU of 2h2z by Molmil
Crystal structure of SARS-CoV main protease with authentic N and C-termini
Descriptor: Replicase polyprotein 1ab
Authors:Yang, H, Xue, X, Shen, W, Zhao, Q, Rao, Z.
Deposit date:2006-05-20
Release date:2007-04-03
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Production of authentic SARS-CoV M(pro) with enhanced activity: application as a novel tag-cleavage endopeptidase for protein overproduction
J.Mol.Biol., 366, 2007
5IMW
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BU of 5imw by Molmil
Trapped Toxin
Descriptor: Intermedilysin
Authors:Lawrence, S.L, Feil, S.C, Morton, C.J, Parker, M.W.
Deposit date:2016-03-07
Release date:2016-08-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Structural Basis for Receptor Recognition by the Human CD59-Responsive Cholesterol-Dependent Cytolysins.
Structure, 24, 2016
2ROE
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BU of 2roe by Molmil
Solution structure of thermus thermophilus HB8 TTHA1718 protein in vitro
Descriptor: Heavy metal binding protein
Authors:Sakakibara, D, Sasaki, A, Ikeya, T, Hamatsu, J, Koyama, H, Mishima, M, Mikawa, T, Waelchli, M, Smith, B.O, Shirakawa, M, Guentert, P, Ito, Y.
Deposit date:2008-03-20
Release date:2009-03-03
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Protein structure determination in living cells by in-cell NMR spectroscopy
Nature, 458, 2009
2H3B
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BU of 2h3b by Molmil
Crystal Structure of Mouse Nicotinamide Phosphoribosyltransferase/Visfatin/Pre-B Cell Colony Enhancing Factor 1
Descriptor: Nicotinamide phosphoribosyltransferase, SULFATE ION
Authors:Wang, T, Zhang, X, Bheda, P, Revollo, J.R, Imai, S.I, Wolberger, C.
Deposit date:2006-05-22
Release date:2006-06-20
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure of Nampt/PBEF/visfatin, a mammalian NAD(+) biosynthetic enzyme.
Nat.Struct.Mol.Biol., 13, 2006
2ROW
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BU of 2row by Molmil
The C1 domain of ROCK II
Descriptor: Rho-associated protein kinase 2, ZINC ION
Authors:Wen, W, Zhang, M.
Deposit date:2008-04-25
Release date:2008-06-24
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The C1 domain of ROCK II
To be Published
5IN9
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BU of 5in9 by Molmil
Crystal structure of Grp94 bound to methyl 3-chloro-2-(2-(1-((5-chlorofuran-2-yl)methyl)-1H-imidazol-2-yl)ethyl)-4,6-dihydroxybenzoate, an inhibitor based on the BnIm and Radamide scaffolds.
Descriptor: Endoplasmin, GLYCEROL, TRIETHYLENE GLYCOL, ...
Authors:Lieberman, R.L, Huard, D.J.E, Kizziah, J.L.
Deposit date:2016-03-07
Release date:2016-05-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Development of Glucose Regulated Protein 94-Selective Inhibitors Based on the BnIm and Radamide Scaffold.
J.Med.Chem., 59, 2016
2RPC
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BU of 2rpc by Molmil
Solution structure of the tandem zf-C2H2 domains from the human zinc finger protein ZIC 3
Descriptor: ZINC ION, Zinc finger protein ZIC 3
Authors:Tomizawa, T, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-05-14
Release date:2009-03-31
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Functional and structural basis of the nuclear localization signal in the ZIC3 zinc finger domain
Hum.Mol.Genet., 17, 2008
2H3O
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BU of 2h3o by Molmil
Structure of MERFT, a membrane protein with two trans-membrane helices
Descriptor: MerF
Authors:Opella, S.J, De Angelis, A.A, Howell, S.C, Nevzorov, A.A.
Deposit date:2006-05-22
Release date:2006-10-03
Last modified:2024-05-29
Method:SOLID-STATE NMR
Cite:Structure Determination of a Membrane Protein with Two Trans-membrane Helices in Aligned Phospholipid Bicelles by Solid-State NMR Spectroscopy.
J.Am.Chem.Soc., 128, 2006
2HCN
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BU of 2hcn by Molmil
Crystal structure of RNA dependent RNA polymerase domain from west nile virus
Descriptor: CALCIUM ION, RNA-directed RNA polymerase (NS5), ZINC ION
Authors:Egloff, M.P, Malet, H, Marseilles Structural Genomics Program @ AFMB (MSGP)
Deposit date:2006-06-17
Release date:2007-02-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure of the RNA polymerase domain of the West Nile virus non-structural protein 5
J.Biol.Chem., 282, 2007
7S84
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BU of 7s84 by Molmil
Crystal structure of CDK2 liganded with compound TW8972
Descriptor: 2-{[2-(1H-indol-3-yl)ethyl]amino}-5-(trifluoromethyl)benzoic acid, Cyclin-dependent kinase 2
Authors:Sun, L, Schonbrunn, E.
Deposit date:2021-09-17
Release date:2022-09-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Development of allosteric and selective CDK2 inhibitors for contraception with negative cooperativity to cyclin binding.
Nat Commun, 14, 2023
2H3W
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BU of 2h3w by Molmil
Crystal structure of the S554A/M564G mutant of murine carnitine acetyltransferase in complex with hexanoylcarnitine and CoA
Descriptor: (R)-3-CARBOXY-2-(HEXANOYLOXY)-N,N,N-TRIMETHYLPROPAN-1-AMINIUM, COENZYME A, carnitine acetyltransferase
Authors:Hsiao, Y.S, Jogl, G, Tong, L.
Deposit date:2006-05-23
Release date:2006-08-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of murine carnitine acetyltransferase in ternary complexes with its substrates
J.Biol.Chem., 281, 2006
2HED
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BU of 2hed by Molmil
CONTRIBUTION OF WATER MOLECULES IN THE INTERIOR OF A PROTEIN TO THE CONFORMATIONAL STABILITY
Descriptor: LYSOZYME, SODIUM ION
Authors:Takano, K, Funahashi, J, Yamagata, Y, Fujii, S, Yutani, K.
Deposit date:1997-09-16
Release date:1998-01-14
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Contribution of water molecules in the interior of a protein to the conformational stability.
J.Mol.Biol., 274, 1997
5IKV
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BU of 5ikv by Molmil
The Structure of Flufenamic Acid Bound to Human Cyclooxygenase-2
Descriptor: 2-[[3-(TRIFLUOROMETHYL)PHENYL]AMINO] BENZOIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, AMMONIUM ION, ...
Authors:Orlando, B.J, Malkowski, M.G.
Deposit date:2016-03-03
Release date:2016-05-25
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.508 Å)
Cite:Substrate-selective Inhibition of Cyclooxygeanse-2 by Fenamic Acid Derivatives Is Dependent on Peroxide Tone.
J.Biol.Chem., 291, 2016
2RIN
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BU of 2rin by Molmil
ABC-transporter choline binding protein in complex with acetylcholine
Descriptor: ACETYLCHOLINE, PUTATIVE GLYCINE BETAINE-BINDING ABC TRANSPORTER PROTEIN
Authors:Oswald, C, Smits, S.H.J, Hoeing, M, Sohn-Boeser, L, Le Rudulier, D, Schmitt, L, Bremer, E.
Deposit date:2007-10-12
Release date:2008-09-30
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of the choline/acetylcholine substrate-binding protein ChoX from Sinorhizobium meliloti in the liganded and unliganded-closed states.
J.Biol.Chem., 283, 2008
2HEN
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BU of 2hen by Molmil
Crystal Structure of the EphB2 Receptor Kinase domain in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Ephrin type-B receptor 2, MAGNESIUM ION
Authors:Wybenga-Groot, L.E, Sicheri, F, Pawson, T.
Deposit date:2006-06-21
Release date:2007-02-13
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A change in conformational dynamics underlies the activation of Eph receptor tyrosine kinases
EMBO J., 25, 2006
2SGF
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BU of 2sgf by Molmil
PHE 18 VARIANT OF TURKEY OVOMUCOID INHIBITOR THIRD DOMAIN COMPLEXED WITH STREPTOMYCES GRISEUS PROTEINASE B
Descriptor: Ovomucoid, PHOSPHATE ION, Streptogrisin B
Authors:Huang, K, Lu, W, Anderson, S, Laskowski Jr, M, James, M.N.G.
Deposit date:1999-03-25
Release date:2003-08-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Recruitment of a Buried K+ Ion to Stabilize the Negative Charge of Ionized P1 in the Hydrophobic Pocket: Crystal Structures of Glu18, Gln18, Asp18 and Asn18 Variants of Turkey Ovomucoid Inhibitor Third Domain Complexed with Streptomyces griseus Protease B at Various pHs
To be Published
7SMI
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BU of 7smi by Molmil
Crystal Structure of L-galactose dehydrogenase from Spinacia oleracea
Descriptor: L-galactose dehydrogenase
Authors:Santillan, J.A.V, Cabrejos, D.A.L, Pereira, H.M, Gomez, J.C.C, Garratt, R.C.
Deposit date:2021-10-26
Release date:2022-07-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural Characterization of L-Galactose Dehydrogenase: An Essential Enzyme for Vitamin C Biosynthesis.
Plant Cell.Physiol., 63, 2022
7RVO
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BU of 7rvo by Molmil
Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI13
Descriptor: 3C-like proteinase, N-[(benzyloxy)carbonyl]-L-valyl-3-cyclopropyl-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-L-alaninamide
Authors:Yang, K, Sankaran, B, Liu, W.
Deposit date:2021-08-19
Release date:2022-07-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A multi-pronged evaluation of aldehyde-based tripeptidyl main protease inhibitors as SARS-CoV-2 antivirals.
Eur.J.Med.Chem., 240, 2022
5IQV
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BU of 5iqv by Molmil
WelO5 bound to Fe, Cl, 2-oxoglutarate, 12-epifischerindole U, and nitric oxide
Descriptor: (6aS,9R,10R,10aS)-9-ethyl-10-isocyano-6,6,9-trimethyl-5,6,6a,7,8,9,10,10a-octahydroindeno[2,1-b]indole, 2-OXOGLUTARIC ACID, CHLORIDE ION, ...
Authors:Mitchell, A.J, Boal, A.K.
Deposit date:2016-03-11
Release date:2016-06-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for halogenation by iron- and 2-oxo-glutarate-dependent enzyme WelO5.
Nat.Chem.Biol., 12, 2016
6M8H
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BU of 6m8h by Molmil
Crystal Structure of the R208Q mutant of G(i) subunit alpha-1
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, Guanine nucleotide-binding protein G(i) subunit alpha-1, MAGNESIUM ION
Authors:Mascarenhas, R, Goossens, J, Leverson, B, Kothawala, S, Ballicora, M, Olsen, K, de freitas, D, Liu, D.
Deposit date:2018-08-21
Release date:2019-08-21
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:FUNCTIONAL CONSEQUENCES OF ONCOGENIC MUTATIONS IN THE SWITCH II REGION OF Galphai1 and Galphas PROTEINS
To Be Published
2HAJ
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BU of 2haj by Molmil
Solution structure of the helicase-binding domain of Escherichia coli primase
Descriptor: DNA primase
Authors:Su, X.C, Loscha, K.V, Dixon, N.E, Otting, G.
Deposit date:2006-06-13
Release date:2006-10-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Monomeric solution structure of the helicase-binding domain of Escherichia coli DnaG primase
Febs J., 273, 2006
7S7A
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BU of 7s7a by Molmil
Crystal structure of CDK2 liganded with compound EF3019
Descriptor: 1,2-ETHANEDIOL, 2-{[2-(2H-indazol-3-yl)ethyl]amino}-5-(trifluoromethyl)benzoic acid, Cyclin-dependent kinase 2
Authors:Sun, L, Schonbrunn, E.
Deposit date:2021-09-15
Release date:2022-09-28
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Screening through Lead Optimization of High Affinity, Allosteric Cyclin-Dependent Kinase 2 (CDK2) Inhibitors as Male Contraceptives That Reduce Sperm Counts in Mice.
J.Med.Chem., 66, 2023

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PDB entries from 2024-07-17

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