Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4RN7
DownloadVisualize
BU of 4rn7 by Molmil
The crystal structure of N-acetylmuramoyl-L-alanine amidase from Clostridium difficile 630
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, FORMIC ACID, GLYCEROL, ...
Authors:Tan, K, Mulligan, R, Kwon, K, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-10-23
Release date:2014-11-05
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.717 Å)
Cite:The crystal structure of N-acetylmuramoyl-L-alanine amidase from Clostridium difficile 630
To be Published
4C2X
DownloadVisualize
BU of 4c2x by Molmil
Human N-myristoyltransferase isoform 2 (NMT2)
Descriptor: 2-oxopentadecyl-CoA, GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE 2, MAGNESIUM ION
Authors:Thinon, E, Serwa, R.A, Brannigan, J.A, Brassat, U, Wright, M.H, Heal, W.P, Wilkinson, A.J, Mann, D.J, Tate, E.W.
Deposit date:2013-08-20
Release date:2014-10-01
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Global Profiling of Co- and Post-Translationally N-Myristoylated Proteomes in Human Cells.
Nat.Commun., 5, 2014
4C68
DownloadVisualize
BU of 4c68 by Molmil
Plasmodium vivax N-myristoyltransferase in complex with a peptidomimetic inhibitor
Descriptor: 2-oxopentadecyl-CoA, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Olaleye, T.O, Brannigan, J.A, Goncalves, V, Roberts, S.M, Leatherbarrow, R.J, Wilkinson, A.J, Tate, E.W.
Deposit date:2013-09-17
Release date:2014-09-24
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Peptidomimetic Inhibitors of N-Myristoyltransferase from Human Malaria and Leishmaniasis Parasites.
Org.Biomol.Chem., 12, 2014
3QJ1
DownloadVisualize
BU of 3qj1 by Molmil
Crystal structure of camel peptidoglycan recognition protein, PGRP-S with a trapped diethylene glycol in the ligand diffusion channel at 3.2 A resolution
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, L(+)-TARTARIC ACID, ...
Authors:Sharma, P, Yamini, S, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2011-01-28
Release date:2011-02-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of camel peptidoglycan recognition protein, PGRP-S with a trapped diethylene glycol in the ligand diffusion channel at 3.2 A resolution
To be Published
6BHP
DownloadVisualize
BU of 6bhp by Molmil
Crystal structure of the Chlamydomonas reinhardtii LCI1 channel
Descriptor: CARBON DIOXIDE, MERCURY (II) ION, Membrane protein
Authors:Chou, T.-H, Radhakrishnan, A.
Deposit date:2017-10-31
Release date:2018-11-07
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (3.209 Å)
Cite:Structure and function of LCI1: a plasma membrane CO 2 channel in the Chlamydomonas CO 2 concentrating mechanism.
Plant J., 102, 2020
1OHW
DownloadVisualize
BU of 1ohw by Molmil
4-AMINOBUTYRATE-AMINOTRANSFERASE inactivated by gamma-vinyl GABA
Descriptor: 4-AMINO HEXANOIC ACID, 4-AMINOBUTYRATE AMINOTRANSFERASE, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Storici, P, Schirmer, T.
Deposit date:2003-06-03
Release date:2003-10-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of {Gamma}-Aminobutyric Acid (Gaba) Aminotransferase, a Pyridoxal 5'-Phosphate, and [2Fe-2S] Cluster-Containing Enzyme, Complexed with {Gamma}-Ethynyl-Gaba and with the Antiepilepsy Drug Vigabatrin
J.Biol.Chem., 279, 2004
3KH2
DownloadVisualize
BU of 3kh2 by Molmil
Crystal structure of the P1 bacteriophage Doc toxin (F68S) in complex with the Phd antitoxin (L17M/V39A). Northeast Structural Genomics targets ER385-ER386
Descriptor: 2-HYDROXYETHYL DISULFIDE, CHLORIDE ION, Death on curing protein, ...
Authors:Arbing, M.A, Kuzin, A.P, Su, M, Abashidze, M, Verdon, G, Liu, M, Xiao, R, Acton, T, Inouye, M, Montelione, G.T, Woychik, N.A, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2009-10-29
Release date:2010-08-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Crystal Structures of Phd-Doc, HigA, and YeeU Establish Multiple Evolutionary Links between Microbial Growth-Regulating Toxin-Antitoxin Systems.
Structure, 18, 2010
4DUI
DownloadVisualize
BU of 4dui by Molmil
DARPIN D1 binding to tubulin beta chain (not in complex)
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, DESIGNED ANKYRIN REPEAT PROTEIN (DARPIN) D1
Authors:Pecqueur, L, Duellberg, C, Dreier, B, Wang, Q, Jiang, C, Pluckthun, A, Surrey, T, Gigant, B, Knossow, M.
Deposit date:2012-02-22
Release date:2013-02-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:An Anti-Tubulin Darpin Caps the Microtubule Plus-End
To be Published
4Q32
DownloadVisualize
BU of 4q32 by Molmil
Crystal Structure of Inosine 5'-monophosphate Dehydrogenase from Clostridium perfringens Complexed with IMP and C91
Descriptor: INOSINIC ACID, Inosine-5'-monophosphate dehydrogenase, N-(naphthalen-2-yl)-2-[2-(pyridin-2-yl)-1H-benzimidazol-1-yl]acetamide
Authors:Maltseva, N, Kim, Y, Makowska-Grzyska, M, Mulligan, R, Gu, M, Zhang, M, Mandapati, K, Gollapalli, D.R, Gorla, S.K, Hedstrom, L, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-04-10
Release date:2014-07-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.788 Å)
Cite:Crystal Structure of Inosine 5'-monophosphate Dehydrogenase from Clostridium perfringens Complexed with IMP and C91
To be Published
4IY0
DownloadVisualize
BU of 4iy0 by Molmil
Structural and ligand binding properties of the Bateman domain of human magnesium transporters CNNM2 and CNNM4
Descriptor: ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, Metal transporter CNNM2
Authors:Corral-Rodriguez, M.A, Stuiver, M, Encinar, J.A, Spiwok, V, Gomez-Garcia, I, Oyenarte, I, Ereno-Orbea, J, Terashima, H, Accardi, A, Diercks, T, Muller, D, Martinez-Cruz, L.A.
Deposit date:2013-01-28
Release date:2014-03-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and ligand binding properties of the Bateman domain of human magnesium transporters CNNM2 and CNNM4
To be Published
5D5R
DownloadVisualize
BU of 5d5r by Molmil
Horse-heart myoglobin - deoxy state
Descriptor: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Barends, T, Schlichting, I.
Deposit date:2015-08-11
Release date:2015-09-16
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Direct observation of ultrafast collective motions in CO myoglobin upon ligand dissociation.
Science, 350, 2015
4B12
DownloadVisualize
BU of 4b12 by Molmil
Plasmodium vivax N-myristoyltransferase with a bound benzofuran inhibitor (compound 23)
Descriptor: 1-[3-methyl-4-(piperidin-4-yloxy)-1-benzofuran-2-yl]-3-phenylpropan-1-one, 2-oxopentadecyl-CoA, CHLORIDE ION, ...
Authors:Yu, Z, Brannigan, J.A, Moss, D.K, Brzozowski, A.M, Wilkinson, A.J, Holder, A.A, Tate, E.W, Leatherbarrow, R.J.
Deposit date:2012-07-06
Release date:2012-10-17
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Design and Synthesis of Inhibitors of Plasmodium Falciparum N-Myristoyltransferase, a Promising Target for Anti-Malarial Drug Discovery.
J.Med.Chem., 55, 2012
4NK7
DownloadVisualize
BU of 4nk7 by Molmil
Crystal Structure of the D. melanogaster Plk4 cryptic polo box (CPB)
Descriptor: Serine/threonine-protein kinase PLK4
Authors:Dong, G, Lesigang, J.
Deposit date:2013-11-12
Release date:2014-08-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.233 Å)
Cite:Structure of the C. elegans ZYG-1 Cryptic Polo Box Suggests a Conserved Mechanism for Centriolar Docking of Plk4 Kinases.
Structure, 22, 2014
3IOZ
DownloadVisualize
BU of 3ioz by Molmil
SIVmac239 Nef in complex with a TCR zeta polypeptide DP1 (L51-D93)
Descriptor: Protein Nef, T-cell surface glycoprotein CD3 zeta chain
Authors:Kim, W.M, Sigalov, A.B, Stern, L.J.
Deposit date:2009-08-15
Release date:2010-02-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.699 Å)
Cite:Pseudo-merohedral twinning and noncrystallographic symmetry in orthorhombic crystals of SIVmac239 Nef core domain bound to different-length TCRzeta fragments.
Acta Crystallogr.,Sect.D, 66, 2010
4RQX
DownloadVisualize
BU of 4rqx by Molmil
Crystal structure of human peroxiredoxin 4(THIOREDOXIN PEROXIDASE) with MESNA
Descriptor: 1-THIOETHANESULFONIC ACID, Peroxiredoxin-4
Authors:Badger, J, Sridhar, V, Logan, C, Hausheer, F.H, Nienaber, V.L.
Deposit date:2014-11-05
Release date:2015-04-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.256 Å)
Cite:Cysteine Specific Targeting of the Functionally Distinct Peroxiredoxin and Glutaredoxin Proteins by the Investigational Disulfide BNP7787.
Molecules, 20, 2015
1J7H
DownloadVisualize
BU of 1j7h by Molmil
Solution Structure of HI0719, a Hypothetical Protein From Haemophilus Influenzae
Descriptor: HYPOTHETICAL PROTEIN HI0719
Authors:Parsons, L, Bonander, N, Eisenstein, E, Gilson, M, Kairys, V, Orban, J, Structure 2 Function Project (S2F)
Deposit date:2001-05-16
Release date:2003-02-11
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure and Functional Ligand Screening of HI0719, a Highly Conserved Protein from Bacteria to Humans in the YjgF/YER057c/UK114 Family
Biochemistry, 42, 2003
3HKP
DownloadVisualize
BU of 3hkp by Molmil
Crystal structure determination of Catechol 1,2-Dioxygenase from Rhodococcus opacus 1CP in complex with protocatechuate
Descriptor: (4S,7R)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE, 3,4-DIHYDROXYBENZOIC ACID, Catechol 1,2-dioxygenase, ...
Authors:Matera, I, Ferraroni, M, Kolomytseva, M, Briganti, F, Scozzafava, A.
Deposit date:2009-05-25
Release date:2010-01-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Catechol 1,2-dioxygenase from the Gram-positive Rhodococcus opacus 1CP: Quantitative structure/activity relationship and the crystal structures of native enzyme and catechols adducts.
J.Struct.Biol., 170, 2010
4R85
DownloadVisualize
BU of 4r85 by Molmil
Crystal structure of 5-methylcytosine deaminase from Klebsiella pneumoniae liganded with 5-methylcytosine
Descriptor: 5-methylcytosine, Cytosine deaminase, FE (II) ION, ...
Authors:Fedorov, A.A, Fedorov, E.V, Hitchcock, D.S, Raushel, F.M, Almo, S.C.
Deposit date:2014-08-29
Release date:2014-09-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.802 Å)
Cite:Crystal structure of 5-methylcytosine deaminase from Klebsiella pneumoniae liganded with 5-methylcytosine
To be Published
4RVY
DownloadVisualize
BU of 4rvy by Molmil
Serial Time resolved crystallography of Photosystem II using a femtosecond X-ray laser. The S state after two flashes (S3)
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Kupitz, C, Basu, S, Grotjohann, I, Fromme, R, Zatsepin, N, Rendek, K.N, Hunter, M, Shoeman, R.L, White, T.A, Wang, D, James, D, Yang, J.-H, Cobb, D.E, Reeder, B, Sierra, R.G, Liu, H, Barty, A, Aquila, A, Deponte, D, Kirian, R, Bari, S, Bergkamp, J.J, Beyerlein, K, Bogan, M.J, Caleman, C, Chao, T.-C, Conrad, C.E, Davis, K.M, Fleckenstein, H, Galli, L, Hau-Riege, S.P, Kassemeyer, S, Laksmono, H, Liang, M, Lomb, L, Marchesini, S, Martin, A.V, Messerschmidt, M, Milathianaki, D, Nass, K, Ros, A, Roy-Chowdhury, S, Schmidt, K, Seibert, M, Steinbrener, J, Stellato, F, Yan, L, Yoon, C, Moore, T.A, Moore, A.L, Pushkar, Y, Williams, G.J, Boutet, S, Doak, R.B, Weierstall, U, Frank, M, Chapman, H.N, Spence, J.C.H, Fromme, P.
Deposit date:2014-11-29
Release date:2015-11-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (5.5 Å)
Cite:Serial time-resolved crystallography of photosystem II using a femtosecond X-ray laser.
Nature, 513, 2014
5C5C
DownloadVisualize
BU of 5c5c by Molmil
Human metabotropic glutamate receptor 7, extracellular ligand binding domain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, GLYCEROL, ...
Authors:Dong, A, Dobrovetsky, E, Hutchinson, A, Tempel, W, Edwards, A.M, Bountra, C, Arrowsmith, C.H, Structural Genomics Consortium (SGC)
Deposit date:2015-06-19
Release date:2015-07-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.862 Å)
Cite:Human metabotropic glutamate receptor 7, extracellular ligand binding domain
to be published
3KDR
DownloadVisualize
BU of 3kdr by Molmil
The Crystal Structure of a HK97 Family Phage Portal Protein from Corynebacterium diphtheriae to 2.9A
Descriptor: GLYCEROL, HK97 Family Phage Portal Protein, PHOSPHATE ION, ...
Authors:Nocek, B, Stein, A.J, Mulligan, R, Duggan, E, Abdullah, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2009-10-23
Release date:2009-12-29
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The Crystal Structure of a HK97 Family Phage Portal Protein from Corynebacterium diphtheriae to 2.9A
To be Published
4AGF
DownloadVisualize
BU of 4agf by Molmil
MTSSL spin labeled L124C mutant of MscS in the open form
Descriptor: SMALL-CONDUCTANCE MECHANOSENSITIVE CHANNEL
Authors:Pliotas, C, Brannigan, E, Naismith, J.H.
Deposit date:2012-01-26
Release date:2012-08-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (4.7 Å)
Cite:Conformational State of the Mscs Mechanosensitive Channel in Solution Revealed by Pulsed Electron-Electron Double Resonance (Peldor) Spectroscopy.
Proc.Natl.Acad.Sci.USA, 109, 2012
4NYW
DownloadVisualize
BU of 4nyw by Molmil
Crystal Structure of the Bromodomain of human CREBBP in complex with a dihydroquinoxalinone ligand
Descriptor: (3R)-N-[3-(3,4-dihydroquinolin-1(2H)-yl)propyl]-3-methyl-2-oxo-1,2,3,4-tetrahydroquinoxaline-5-carboxamide, 1,2-ETHANEDIOL, CREB-binding protein, ...
Authors:Filippakopoulos, P, Picaud, S, Felletar, I, Rooney, T.P.C, Fedorov, O, Martin, S, Monteiro, O.P, Conway, S.J, von Delft, F, Brennan, P, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2013-12-11
Release date:2014-01-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Crystal Structure of the Bromodomain of human CREBBP in complex with a dihydroquinoxalinone ligand
TO BE PUBLISHED
4C2Z
DownloadVisualize
BU of 4c2z by Molmil
Human N-myristoyltransferase (NMT1) with Myristoyl-CoA and inhibitor bound
Descriptor: 2,6-dichloro-4-(2-piperazin-1-ylpyridin-4-yl)-N-(1,3,5-trimethyl-1H-pyrazol-4-yl)benzenesulfonamide, CHLORIDE ION, CITRIC ACID, ...
Authors:Thinon, E, Serwa, R.A, Brannigan, J.A, Brassat, U, Wright, M.H, Heal, W.P, Wilkinson, A.J, Mann, D.J, Tate, E.W.
Deposit date:2013-08-20
Release date:2014-10-01
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Chemical Proteomics Defines the Mammalian N- Myristoylated Proteome in Live Cells Global Profiling of Co- and Post-Translationally N-Myristoylated Proteomes in Human Cells.
Nat.Commun., 5, 2014
2F2H
DownloadVisualize
BU of 2f2h by Molmil
Structure of the YicI thiosugar Michaelis complex
Descriptor: 3[N-MORPHOLINO]PROPANE SULFONIC ACID, 4-NITROPHENYL 6-THIO-6-S-ALPHA-D-XYLOPYRANOSYL-BETA-D-GLUCOPYRANOSIDE, GLYCEROL, ...
Authors:Kim, Y.-W, Lovering, A.L, Strynadka, N.C.J, Withers, S.G.
Deposit date:2005-11-16
Release date:2006-02-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Expanding the Thioglycoligase Strategy to the Synthesis of alpha-linked Thioglycosides Allows Structural Investigation of the Parent Enzyme/Substrate Complex
J.Am.Chem.Soc., 128, 2006

224572

PDB entries from 2024-09-04

PDB statisticsPDBj update infoContact PDBjnumon