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8UQT
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BU of 8uqt by Molmil
Crystal structure of the Tree Shrew p53 tetramerization domain
Descriptor: Cellular tumor antigen p53, SULFATE ION
Authors:Wahba, H.M, Sakaguchi, S, Nakagawa, N, Wada, J, Kamada, R, Sakaguchi, K, Omichinski, J.G.
Deposit date:2023-10-24
Release date:2023-12-20
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:Highly Similar Tetramerization Domains from the p53 Protein of Different Mammalian Species Possess Varying Biophysical, Functional and Structural Properties.
Int J Mol Sci, 24, 2023
9DLH
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BU of 9dlh by Molmil
donor substrate analog-bound AftB
Descriptor: 2-deoxy-2-fluoro-1-O-[(S)-hydroxy{[(2E,6E)-3,7,11-trimethyldodeca-2,6,10-trien-1-yl]oxy}phosphoryl]-beta-D-arabinofuranose, Arabinosyltransferase AftB
Authors:Yaqi, L.
Deposit date:2024-09-11
Release date:2025-06-25
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Mechanistic studies of mycobacterial glycolipid biosynthesis by the mannosyltransferase PimE.
Nat Commun, 16, 2025
9DLF
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BU of 9dlf by Molmil
Arabinosyltransferase AftB in complex with Fab_B3
Descriptor: Arabinosyltransferase AftB, Fab_B3 heavy chain, Fab_B3 light chain, ...
Authors:Liu, Y, Mancia, F.
Deposit date:2024-09-10
Release date:2025-06-25
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Mechanistic studies of mycobacterial glycolipid biosynthesis by the mannosyltransferase PimE.
Nat Commun, 16, 2025
8UQR
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BU of 8uqr by Molmil
Crystal structure of the human p53 tetramerization domain
Descriptor: Cellular tumor antigen p53
Authors:Wahba, H.M, Sakaguchi, S, Nakagawa, N, Wada, J, Kamada, R, Sakaguchi, K, Omichinski, J.G.
Deposit date:2023-10-24
Release date:2023-12-20
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Highly Similar Tetramerization Domains from the p53 Protein of Different Mammalian Species Possess Varying Biophysical, Functional and Structural Properties.
Int J Mol Sci, 24, 2023
8UQS
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BU of 8uqs by Molmil
Crystal structure of the Opossum p53 tetramerization domain
Descriptor: Cellular tumor antigen p53 (Fragment)
Authors:Wahba, H.M, Sakaguchi, S, Nakagawa, N, Wada, J, Kamada, R, Sakaguchi, K, Omichinski, J.G.
Deposit date:2023-10-24
Release date:2023-12-20
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Highly Similar Tetramerization Domains from the p53 Protein of Different Mammalian Species Possess Varying Biophysical, Functional and Structural Properties.
Int J Mol Sci, 24, 2023
9DM7
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BU of 9dm7 by Molmil
mannosyltransferase PimE in complex with Fab_E6
Descriptor: Fab_E6 heavy chain, Fab_E6 light chain, Mannosyltransferase
Authors:Liu, Y.
Deposit date:2024-09-12
Release date:2025-06-25
Method:ELECTRON MICROSCOPY (3.02 Å)
Cite:Mechanistic studies of mycobacterial glycolipid biosynthesis by the mannosyltransferase PimE.
Nat Commun, 16, 2025
9DM5
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BU of 9dm5 by Molmil
Product-Bound mannosyltransferase PimE
Descriptor: (2S)-1-{[(S)-{[(1S,2R,3R,4S,5S,6R)-2-[(6-O-hexadecanoyl-beta-L-gulopyranosyl)oxy]-3,4,5-trihydroxy-6-{[beta-D-mannopyranosyl-(1->2)-alpha-D-mannopyranosyl-(1->6)-beta-D-mannopyranosyl-(1->6)-alpha-D-mannopyranosyl]oxy}cyclohexyl]oxy}(hydroxy)phosphoryl]oxy}-3-(hexadecanoyloxy)propan-2-yl 10-methyloctadecanoate, MONO-TRANS, OCTA-CIS DECAPRENYL-PHOSPHATE, ...
Authors:Liu, Y.
Deposit date:2024-09-12
Release date:2025-06-25
Method:ELECTRON MICROSCOPY (3.46 Å)
Cite:Mechanistic studies of mycobacterial glycolipid biosynthesis by the mannosyltransferase PimE.
Nat Commun, 16, 2025
6RS8
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BU of 6rs8 by Molmil
X-ray crystal structure of LsAA9B (transition metals soak)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Frandsen, K.E.H, Tovborg, M, Poulsen, J.C.N, Johansen, K.S, Lo Leggio, L.
Deposit date:2019-05-21
Release date:2019-09-11
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Insights into an unusual Auxiliary Activity 9 family member lacking the histidine brace motif of lytic polysaccharide monooxygenases.
J.Biol.Chem., 294, 2019
7N44
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BU of 7n44 by Molmil
Crystal structure of the SARS-CoV-2 (2019-NCoV) main protease in complex with 5-(3-{3-chloro-5-[(5-methyl-1,3-thiazol-4-yl)methoxy]phenyl}-2-oxo-2H-[1,3'-bipyridin]-5-yl)pyrimidine-2,4(1H,3H)-dione (compound 13)
Descriptor: 3C-like proteinase, 5-(3-{3-chloro-5-[(5-methyl-1,3-thiazol-4-yl)methoxy]phenyl}-2-oxo-2H-[1,3'-bipyridin]-5-yl)pyrimidine-2,4(1H,3H)-dione
Authors:Reilly, R.A, Zhang, C.H, Deshmukh, M.G, Ippolito, J.A, Hollander, K, Jorgensen, W.L, Anderson, K.S.
Deposit date:2021-06-03
Release date:2021-07-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Optimization of Triarylpyridinone Inhibitors of the Main Protease of SARS-CoV-2 to Low-Nanomolar Antiviral Potency.
Acs Med.Chem.Lett., 12, 2021
6EUE
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BU of 6eue by Molmil
Rivastigmine analogue bound to Tc ACHE.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Acetylcholinesterase, PENTAETHYLENE GLYCOL
Authors:De la Mora, E, Brazzolotto, X, Dighe, S.N, Silman, I, Weik, M, Ross, B.
Deposit date:2017-10-30
Release date:2018-11-14
Last modified:2025-04-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Rivastigmine and metabolite analogues with putative Alzheimer's disease-modifying properties in a Caenorhabditis elegans model
Commun Chem, 2019
2CLY
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BU of 2cly by Molmil
Subcomplex of the stator of bovine mitochondrial ATP synthase
Descriptor: ATP SYNTHASE B CHAIN, MITOCHONDRIAL, ATP SYNTHASE COUPLING FACTOR 6, ...
Authors:Kane Dickson, V, Silvester, J.A, Fearnley, I.M, Leslie, A.G.W, Walker, J.E.
Deposit date:2006-05-03
Release date:2006-06-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:On the Structure of the Stator of the Mitochondrial ATP Synthase.
Embo J., 25, 2006
5UV6
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BU of 5uv6 by Molmil
Crystal structure of human Opioid Binding Protein/Cell Adhesion Molecule Like (OPCML)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Opioid-binding protein/cell adhesion molecule, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Birtley, J.R, Stern, L.J, Gabra, H, Zanini, E.
Deposit date:2017-02-19
Release date:2018-03-21
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.65002 Å)
Cite:Inactivating mutations and X-ray crystal structure of the tumor suppressor OPCML reveal cancer-associated functions.
Nat Commun, 10, 2019
6K7Y
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BU of 6k7y by Molmil
Intact human mitochondrial calcium uniporter complex with MICU1/MICU2 subunits
Descriptor: (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL, CALCIUM ION, CARDIOLIPIN, ...
Authors:Zhuo, W, Zhou, H, Yang, M.
Deposit date:2019-06-10
Release date:2020-09-09
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure of intact human MCU supercomplex with the auxiliary MICU subunits.
Protein Cell, 12, 2021
7NNH
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BU of 7nnh by Molmil
Cryo-EM structure of VAR2CSA FCR3 domain DBL5/6
Descriptor: Erythrocyte membrane protein 1
Authors:Wang, K.T, Dagil, R, Salanti, A, Gourdon, P.E.
Deposit date:2021-02-24
Release date:2021-06-02
Last modified:2025-07-09
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Cryo-EM reveals the architecture of placental malaria VAR2CSA and provides molecular insight into chondroitin sulfate binding.
Nat Commun, 12, 2021
6MID
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BU of 6mid by Molmil
Cryo-EM structure of the ZIKV virion in complex with Fab fragments of the potently neutralizing human monoclonal antibody ZIKV-195
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, E protein, M protein, ...
Authors:Long, F, Rossmann, M.G.
Deposit date:2018-09-19
Release date:2019-01-16
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural basis of a potent human monoclonal antibody against Zika virus targeting a quaternary epitope.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
1OMY
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BU of 1omy by Molmil
Crystal Structure of a Recombinant alpha-insect Toxin BmKaIT1 from the scorpion Buthus martensii Karsch
Descriptor: ACETIC ACID, Alpha-neurotoxin TX12, CHLORIDE ION
Authors:Huang, Y, Huang, Q, Chen, H, Tang, Y, Miyake, H, Kusunoki, M.
Deposit date:2003-02-26
Release date:2003-09-09
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystallization and preliminary crystallographic study of rBmKalphaIT1, a recombinant alpha-insect toxin from the scorpion Buthus martensii Karsch.
Acta Crystallogr.,Sect.D, 59, 2003
2NNE
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BU of 2nne by Molmil
The Structural Identification of the Interaction Site and Functional State of RBP for its Membrane Receptor
Descriptor: CADMIUM ION, GLYCEROL, Major urinary protein 2
Authors:Redondo, C, Bingham, R.J, Vouropoulou, M, Homans, S.W, Findlay, J.B.
Deposit date:2006-10-24
Release date:2007-10-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Identification of the retinol-binding protein (RBP) interaction site and functional state of RBPs for the membrane receptor.
Faseb J., 22, 2008
6D3M
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BU of 6d3m by Molmil
FT_T dioxygenase with bound quizalofop
Descriptor: (2R)-2-{4-[(6-chloroquinoxalin-2-yl)oxy]phenoxy}propanoic acid, 2-OXOGLUTARIC ACID, CHLORIDE ION, ...
Authors:Rydel, T.J, Halls, C.E.
Deposit date:2018-04-16
Release date:2018-08-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Development of enzymes for robust aryloxyphenoxypropionate and synthetic auxin herbicide tolerance traits in maize and soybean crops.
Pest Manag. Sci., 75, 2019
6CT2
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BU of 6ct2 by Molmil
MYST histone acetyltransferase KAT6A/B in complex with WM-1119
Descriptor: 3-fluoro-N'-[(2-fluorophenyl)sulfonyl]-5-(pyridin-2-yl)benzohydrazide, Histone acetyltransferase KAT8, MAGNESIUM ION, ...
Authors:Ren, B, Peat, T.S.
Deposit date:2018-03-22
Release date:2018-08-01
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.128 Å)
Cite:Inhibitors of histone acetyltransferases KAT6A/B induce senescence and arrest tumour growth.
Nature, 560, 2018
6MQC
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BU of 6mqc by Molmil
Vaccine-elicited NHP FP-targeting neutralizing antibody 0PV-c.01 in complex with FP (residue 512-519)
Descriptor: 0PV-C.01 antibody Fab heavy chain, 0PV-C.01 antibody Fab light chain, HIV fusion peptide residue 512-519
Authors:Xu, K, Wang, Y, Kwong, P.D.
Deposit date:2018-10-09
Release date:2019-07-31
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Antibody Lineages with Vaccine-Induced Antigen-Binding Hotspots Develop Broad HIV Neutralization.
Cell, 178, 2019
3NM8
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BU of 3nm8 by Molmil
Crystal structure of Tyrosinase from Bacillus megaterium
Descriptor: CHLORIDE ION, COPPER (II) ION, Tyrosinase, ...
Authors:Sendovski, M, Kanteev, M, Adir, N, Fishman, A.
Deposit date:2010-06-22
Release date:2010-11-17
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:First structures of an active bacterial tyrosinase reveal copper plasticity
J.Mol.Biol., 405, 2011
5O2F
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BU of 5o2f by Molmil
Crystal structure of NDM-1 in complex with hydrolyzed ampicillin - new refinement
Descriptor: (2R,4S)-2-[(R)-{[(2R)-2-amino-2-phenylacetyl]amino}(carboxy)methyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, 1,2-ETHANEDIOL, CHLORIDE ION, ...
Authors:Raczynska, J.E, Shabalin, I.G, Jaskolski, M, Minor, W, Wlodawer, A.
Deposit date:2017-05-20
Release date:2018-12-26
Last modified:2025-01-29
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:A close look onto structural models and primary ligands of metallo-beta-lactamases.
Drug Resist. Updat., 40, 2018
7FCD
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BU of 7fcd by Molmil
Structure of the SARS-CoV-2 A372T spike glycoprotein (open)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Wang, X, Zhang, S.
Deposit date:2021-07-14
Release date:2022-01-26
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Loss of Spike N370 glycosylation as an important evolutionary event for the enhanced infectivity of SARS-CoV-2.
Cell Res., 32, 2022
7FCE
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BU of 7fce by Molmil
Structure of the SARS-CoV-2 A372T spike glycoprotein (closed)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Wang, X, Zhang, S.
Deposit date:2021-07-14
Release date:2022-01-26
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Loss of Spike N370 glycosylation as an important evolutionary event for the enhanced infectivity of SARS-CoV-2.
Cell Res., 32, 2022
6KD1
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BU of 6kd1 by Molmil
Room temperature structure of lysozyme delivered in agarose by serial millisecond crystallography
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Nam, K.H.
Deposit date:2019-06-30
Release date:2019-07-17
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Stable sample delivery in viscous media via a capillary for serial crystallography.
J.Appl.Crystallogr., 53, 2020

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