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4JYA
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BU of 4jya by Molmil
Crystal structures of pseudouridinilated stop codons with ASLs
Descriptor: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Fernandez, I.S, Ng, C.L, Kelley, A.C, Guowei, W, Yu, Y.T, Ramakrishnan, V.
Deposit date:2013-03-29
Release date:2013-06-26
Last modified:2013-08-21
Method:X-RAY DIFFRACTION (3.098 Å)
Cite:Unusual base pairing during the decoding of a stop codon by the ribosome.
Nature, 500, 2013
4JV5
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BU of 4jv5 by Molmil
Crystal structures of pseudouridinilated stop codons with ASLs
Descriptor: 16S ribosomal RNA, 30S ribosomal protein 20, 30S ribosomal protein S10, ...
Authors:Fernandez, I.S, Ng, C.L, Kelley, A.C, Guowei, W, Yu, Y.T, Ramakrishnan, V.
Deposit date:2013-03-25
Release date:2013-06-26
Last modified:2013-08-21
Method:X-RAY DIFFRACTION (3.162 Å)
Cite:Unusual base pairing during the decoding of a stop codon by the ribosome.
Nature, 500, 2013
2D6F
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BU of 2d6f by Molmil
Crystal structure of Glu-tRNA(Gln) amidotransferase in the complex with tRNA(Gln)
Descriptor: Glutamyl-tRNA(Gln) amidotransferase subunit D, Glutamyl-tRNA(Gln) amidotransferase subunit E, ZINC ION, ...
Authors:Nureki, O.
Deposit date:2005-11-13
Release date:2006-07-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Structural basis of RNA-dependent recruitment of glutamine to the genetic code
Science, 312, 2006
6QI8
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BU of 6qi8 by Molmil
Truncated human R2TP complex, structure 3 (ADP-filled)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, RuvB-like 1, RuvB-like 2
Authors:Munoz-Hernandez, H, Rodriguez, C.F, Llorca, O.
Deposit date:2019-01-18
Release date:2019-04-10
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.75 Å)
Cite:Structural mechanism for regulation of the AAA-ATPases RUVBL1-RUVBL2 in the R2TP co-chaperone revealed by cryo-EM.
Sci Adv, 5, 2019
6QI9
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BU of 6qi9 by Molmil
Truncated human R2TP complex, structure 4 (ADP-empty)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, RuvB-like 1, RuvB-like 2
Authors:Munoz-Hernandez, H, Rodriguez, C.F, Llorca, O.
Deposit date:2019-01-18
Release date:2019-05-15
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.63 Å)
Cite:Structural mechanism for regulation of the AAA-ATPases RUVBL1-RUVBL2 in the R2TP co-chaperone revealed by cryo-EM.
Sci Adv, 5, 2019
5KW1
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BU of 5kw1 by Molmil
Crystal Structure of the Two Tandem RRM Domains of PUF60 Bound to a Modified AdML Pre-mRNA 3' Splice Site Analogue
Descriptor: CHLORIDE ION, DNA/RNA (30-MER), Poly(U)-binding-splicing factor PUF60
Authors:Crichlow, G.V, Hsiao, H.-H, Albright, R, Lolis, E.J, Braddock, D.T.
Deposit date:2016-07-15
Release date:2017-08-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Unraveling the mechanism of recognition of the 3' splice site of the adenovirus major late promoter intron by the alternative splicing factor PUF60.
Plos One, 15, 2020
2GJE
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BU of 2gje by Molmil
Structure of a guideRNA-binding protein complex bound to a gRNA
Descriptor: RNA tetramer, guide RNA 40-mer, mitochondrial RNA-binding protein 1, ...
Authors:Schumacher, M.A, Karamooz, E, Zikova, A, Trantirek, L, Lukes, J.
Deposit date:2006-03-30
Release date:2006-09-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.37 Å)
Cite:Crystal Structures of T. brucei MRP1/MRP2 Guide-RNA Binding Complex Reveal RNA Matchmaking Mechanism.
Cell(Cambridge,Mass.), 126, 2006
8OPP
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BU of 8opp by Molmil
Structure of human terminal uridylyltransferase 7 (hTUT7/ZCCHC6) bound with pre-let7g miRNA and UTPalphaS
Descriptor: RNA (25-MER), Terminal uridylyltransferase 7, [[(2~{R},3~{S},4~{R},5~{R})-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-sulfanyl-phosphoryl] phosphono hydrogen phosphate
Authors:Yi, G, Ye, M, Gilbert, R.J.
Deposit date:2023-04-07
Release date:2024-07-24
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (3.76 Å)
Cite:Structural basis for activity switching in polymerases determining the fate of let-7 pre-miRNAs.
Nat.Struct.Mol.Biol., 2024
8WIG
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BU of 8wig by Molmil
Crystal structure of E. coli ThrS catalytic domain mutant G463S/Q484A
Descriptor: Threonine--tRNA ligase, ZINC ION
Authors:Qiao, H, Wang, Z, Wang, J, Fang, P.
Deposit date:2023-09-24
Release date:2024-07-24
Method:X-RAY DIFFRACTION (3.22 Å)
Cite:Specific glycine-dependent enzyme motion determines the potency of conformation selective inhibitors of threonyl-tRNA synthetase.
Commun Biol, 7, 2024
8WII
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BU of 8wii by Molmil
Crystal structure of E. coli ThrS catalytic domain mutant G463A in complex with Obafluorin
Descriptor: Threonine--tRNA ligase, ZINC ION, ~{N}-[(2~{R},3~{S})-2-[(4-nitrophenyl)methyl]-4-oxidanylidene-oxetan-3-yl]-2,3-bis(oxidanyl)benzamide
Authors:Qiao, H, Wang, Z, Wang, J, Fang, P.
Deposit date:2023-09-24
Release date:2024-07-24
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:Specific glycine-dependent enzyme motion determines the potency of conformation selective inhibitors of threonyl-tRNA synthetase.
Commun Biol, 7, 2024
6NOW
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BU of 6now by Molmil
Human Mitochondrial Alanyl-tRNA Synthetase C-Ala domain
Descriptor: Alanine--tRNA ligase, mitochondrial
Authors:Kuhle, B, Schimmel, P.
Deposit date:2019-01-16
Release date:2020-01-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (4.099 Å)
Cite:Relaxed sequence constraints favor mutational freedom in idiosyncratic metazoan mitochondrial tRNAs.
Nat Commun, 11, 2020
8WIA
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BU of 8wia by Molmil
Crystal structure of E. coli ThrS catalytic domain mutant G463S
Descriptor: Threonine--tRNA ligase, ZINC ION
Authors:Qiao, H, Wang, Z, Wang, J, Fang, P.
Deposit date:2023-09-24
Release date:2024-07-24
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Specific glycine-dependent enzyme motion determines the potency of conformation selective inhibitors of threonyl-tRNA synthetase.
Commun Biol, 7, 2024
4C3J
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BU of 4c3j by Molmil
Structure of 14-subunit RNA polymerase I at 3.35 A resolution, crystal form C2-90
Descriptor: DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA12, DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA135, DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA14, ...
Authors:Fernandez-Tornero, C, Moreno-Morcillo, M, Rashid, U.J, Taylor, N.M.I, Ruiz, F.M, Gruene, T, Legrand, P, Steuerwald, U, Muller, C.W.
Deposit date:2013-08-24
Release date:2013-10-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Crystal Structure of the 14-Subunit RNA Polymerase I
Nature, 502, 2013
4C3H
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BU of 4c3h by Molmil
Structure of 14-subunit RNA polymerase I at 3.27 A resolution, crystal form C2-93
Descriptor: DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA12, DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA135, DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA14, ...
Authors:Fernandez-Tornero, C, Moreno-Morcillo, M, Rashid, U.J, Taylor, N.M.I, Ruiz, F.M, Gruene, T, Legrand, P, Steuerwald, U, Muller, C.W.
Deposit date:2013-08-24
Release date:2013-10-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.27 Å)
Cite:Crystal Structure of the 14-Subunit RNA Polymerase I
Nature, 502, 2013
4C3I
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BU of 4c3i by Molmil
Structure of 14-subunit RNA polymerase I at 3.0 A resolution, crystal form C2-100
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA12, DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA135, ...
Authors:Fernandez-Tornero, C, Moreno-Morcillo, M, Rashid, U.J, Taylor, N.M.I, Ruiz, F.M, Gruene, T, Legrand, P, Steuerwald, U, Muller, C.W.
Deposit date:2013-08-24
Release date:2013-10-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal Structure of the 14-Subunit RNA Polymerase I
Nature, 502, 2013
6NHI
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BU of 6nhi by Molmil
Crystal structure of Histidine--tRNA ligase from Elizabethkingia sp. CCUG 26117
Descriptor: Histidine--tRNA ligase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2018-12-21
Release date:2019-01-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of Histidine--tRNA ligase from Elizabethkingia sp. CCUG 26117
TO BE PUBLISHED
3AKZ
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BU of 3akz by Molmil
Crystal structure of Thermotoga maritima nondiscriminating glutamyl-tRNA synthetase in complex with tRNAGln and a glutamyl-AMP analog
Descriptor: Glutamyl-tRNA synthetase 2, O5'-(L-GLUTAMYL-SULFAMOYL)-ADENOSINE, tRNAGln
Authors:Ito, T, Yokoyama, S.
Deposit date:2010-07-19
Release date:2010-09-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Two enzymes bound to one transfer RNA assume alternative conformations for consecutive reactions.
Nature, 467, 2010
7RQ5
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BU of 7rq5 by Molmil
Hairpin near 3'-Splice Site of Influenza A Segment 7 Bound to 5-nt Oligonucleotide
Descriptor: RNA (5'-D(*(MU5)P*(MLC)P*(MRC))-R(P*(LG)P*(MU3))-3'), RNA (5'-R(*AP*UP*CP*CP*AP*GP*AP*AP*AP*CP*GP*GP*AP*UP*GP*GP*AP*UP*A)-3')
Authors:Kauffmann, A.D, Kennedy, S.D, Turner, D.H.
Deposit date:2021-08-05
Release date:2022-01-19
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Nuclear magnetic resonance reveals a two hairpin equilibrium near the 3'-splice site of influenza A segment 7 mRNA that can be shifted by oligonucleotides.
Rna, 28, 2022
8PTW
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BU of 8ptw by Molmil
Chaetomium thermophilum Rix1-complex
Descriptor: Pre-rRNA-processing protein IPI3, Pre-rRNA-processing protein RIX1
Authors:Thoms, M, Cheng, J, Denk, T, Berninghausen, O, Beckmann, R.
Deposit date:2023-07-15
Release date:2023-11-15
Last modified:2023-12-20
Method:ELECTRON MICROSCOPY (2.91 Å)
Cite:Structural insights into coordinating 5S RNP rotation with ITS2 pre-RNA processing during ribosome formation.
Embo Rep., 24, 2023
3B31
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BU of 3b31 by Molmil
Crystal structure of domain III of the Cricket Paralysis Virus IRES RNA
Descriptor: IRIDIUM HEXAMMINE ION, PHOSPHATE ION, RNA (29-MER), ...
Authors:Kieft, J.S, Costantino, D.A, Pfingsten, J.S, Rambo, R.P.
Deposit date:2007-10-19
Release date:2007-12-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:tRNA-mRNA mimicry drives translation initiation from a viral IRES.
Nat.Struct.Mol.Biol., 15, 2008
5H4V
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BU of 5h4v by Molmil
Structure of glutamyl-tRNA synthetase (Xoo1504) from Xanthomonas oryzae pv. oryzae
Descriptor: Glutamate--tRNA ligase
Authors:Doan, T.-N.-T, Ho, T.-H, Kang, L.-W.
Deposit date:2016-11-02
Release date:2017-10-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Transcriptional expression of aminoacyl tRNA synthetase genes of Xanthomonas oryzae pv. oryzae (Xoo) on rice-leaf extract treatment and crystal structure of Xoo glutamyl-tRNA synthetase
CROP PASTURE SCI, 68, 2017
5ZDK
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BU of 5zdk by Molmil
Crystal Structure Analysis of TtQRS in complex with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CESIUM ION, CHLORIDE ION, ...
Authors:Mutharasappan, N, Jain, V, Sharma, A, Manickam, Y, Jeyaraman, J.
Deposit date:2018-02-23
Release date:2018-12-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural and functional analysis of Glutaminyl-tRNA synthetase (TtGlnRS) from Thermus thermophilus HB8 and its complexes
Int. J. Biol. Macromol., 120, 2018
5B63
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BU of 5b63 by Molmil
Crystal structures of E.coli arginyl-tRNA synthetase (ArgRS) in complex with substrate tRNA(Arg)
Descriptor: Arginine--tRNA ligase, tRNA-Arg
Authors:Zhou, M, Ye, S, Stephen, P, Zhang, R, Wang, E.D, Giege, R, Lin, S.X.
Deposit date:2016-05-24
Release date:2017-05-31
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structures of E.coli arginyl-tRNA synthetase (ArgRS) in complex with substrate tRNA(Arg)
To Be Published
3FNR
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BU of 3fnr by Molmil
CRYSTAL STRUCTURE OF PUTATIVE ARGINYL T-RNA SYNTHETASE FROM Campylobacter jejuni;
Descriptor: Arginyl-tRNA synthetase, GLYCEROL, SULFATE ION
Authors:Patskovsky, Y, Ramagopal, U, Toro, R, Gilmore, M, Chang, S, Groshong, C, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-12-26
Release date:2009-01-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:CRYSTAL STRUCTURE OF A PUTATIVE ARGINYL T-RNA SYNTHETASE FROM Campylobacter jejuni
To be Published
6N0W
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BU of 6n0w by Molmil
Crystal structure of a Tyrosine--tRNA ligase from Elizabethkingia anophelis
Descriptor: Tyrosine--tRNA ligase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2018-11-07
Release date:2018-12-05
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of a Tyrosine--tRNA ligase from Elizabethkingia anophelis
To Be Published

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