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1L1K
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BU of 1l1k by Molmil
NMR Identification and Characterization of the Flexible Regions in the 160 KD Molten Globule-like Aggregate of Barstar at Low pH
Descriptor: Barstar
Authors:Juneja, J, Bhavesh, N.S, Udgaokar, J.B, Hosur, R.V.
Deposit date:2002-02-18
Release date:2002-12-04
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR identification and characterization of the flexible regions in the 160 kDa molten globule-like aggregate of barstar at low pH.
Biochemistry, 41, 2002
6T9E
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BU of 6t9e by Molmil
Crystal structure of a bispecific DutaFab in complex with human PDGF
Descriptor: DutaFab mat VH chain, DutaFab mat VL chain, Platelet-derived growth factor subunit B
Authors:Kimbung, R, Logan, D.T, Beckmann, R, Jensen, K, Speck, J, Fenn, S, Kettenberger, H.
Deposit date:2019-10-28
Release date:2020-12-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.989 Å)
Cite:DutaFabs are engineered therapeutic Fab fragments that can bind two targets simultaneously.
Nat Commun, 12, 2021
7RCP
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BU of 7rcp by Molmil
GltPh mutant (S279E/D405N) in complex with aspartate and sodium ions
Descriptor: ASPARTIC ACID, Glutamate transporter homolog, SODIUM ION
Authors:Reddy, K.D, Boudker, O.
Deposit date:2021-07-07
Release date:2022-04-20
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:The archaeal glutamate transporter homologue GltPh shows heterogeneous substrate binding.
J.Gen.Physiol., 154, 2022
3HLL
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BU of 3hll by Molmil
Crystal Structure of Human p38alpha complexed with PH-797804
Descriptor: 2-fluoro-4-[4-(4-fluorophenyl)-1H-pyrazol-3-yl]pyridine, 3-{3-bromo-4-[(2,4-difluorobenzyl)oxy]-6-methyl-2-oxopyridin-1(2H)-yl}-N,4-dimethylbenzamide, HYPOPHOSPHITE, ...
Authors:Shieh, H.-S, Williams, J.M, Stegeman, R.A, Kurumbail, R.G.
Deposit date:2009-05-27
Release date:2009-07-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural bioinformatics-based prediction of exceptional selectivity of p38 MAP kinase inhibitor PH-797804.
Biochemistry, 48, 2009
6TD2
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BU of 6td2 by Molmil
Mus musculus Acetylcholinesterase in complex with N-(2-(diethylamino)ethyl)-1-(4-(trifluoromethyl)phenyl)methanesulfonamide
Descriptor: 1,2-ETHANEDIOL, 2-(2-METHOXYETHOXY)ETHANOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Forsgren, N, Ekstrom, F.
Deposit date:2019-11-07
Release date:2020-10-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Physical Mechanisms Governing Substituent Effects on Arene-Arene Interactions in a Protein Milieu.
J.Phys.Chem.B, 124, 2020
4A7H
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BU of 4a7h by Molmil
Structure of the Actin-Tropomyosin-Myosin Complex (rigor ATM 2)
Descriptor: ACTIN, ALPHA SKELETAL MUSCLE, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Behrmann, E, Mueller, M, Penczek, P.A, Mannherz, H.G, Manstein, D.J, Raunser, S.
Deposit date:2011-11-14
Release date:2012-08-01
Last modified:2017-08-30
Method:ELECTRON MICROSCOPY (7.8 Å)
Cite:Structure of the Rigor Actin-Tropomyosin-Myosin Complex.
Cell(Cambridge,Mass.), 150, 2012
5MM9
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BU of 5mm9 by Molmil
VIM-2_2b. Metallo-beta-Lactamase Inhibitors by Bioisosteric Replacement: Preparation, Activity and Binding
Descriptor: (2~{R})-2-diethoxyphosphoryl-5-phenyl-pentane-1-thiol, MAGNESIUM ION, Metallo-beta-lactamase VIM-17, ...
Authors:Skagseth, S, Akhter, S, Paulsen, M.H, Samuelsen, O, Muhammad, Z, Leiros, H.-K.S, Bayer, A.
Deposit date:2016-12-08
Release date:2017-03-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Metallo-beta-lactamase inhibitors by bioisosteric replacement: Preparation, activity and binding.
Eur J Med Chem, 135, 2017
4AB9
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BU of 4ab9 by Molmil
Fragments bound to bovine trypsin for the SAMPL challenge
Descriptor: 1,2-ETHANEDIOL, 1-(2,3-dihydro-1-benzofuran-5-yl)methanamine, CALCIUM ION, ...
Authors:Newman, J, Peat, T.S.
Deposit date:2011-12-08
Release date:2012-02-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:The Dingo Dataset: A Comprehensive Set of Data for the Sampl Challenge.
J.Comput.Aided Mol.Des., 26, 2012
3HSE
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BU of 3hse by Molmil
Crystal structure of Staphylococcus aureus protein SarZ in reduced form
Descriptor: HTH-type transcriptional regulator sarZ
Authors:Poor, C.B, Duguid, E, Rice, P.A, He, C.
Deposit date:2009-06-10
Release date:2009-07-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structures of the reduced, sulfenic acid, and mixed disulfide forms of SarZ, a redox active global regulator in Staphylococcus aureus.
J.Biol.Chem., 284, 2009
5KSZ
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BU of 5ksz by Molmil
hMiro EF hand and cGTPase domains in the GMPPCP-bound state
Descriptor: CHLORIDE ION, MAGNESIUM ION, Mitochondrial Rho GTPase 1, ...
Authors:Klosowiak, J.L, Focia, P.J, Rice, S.E, Freymann, D.M.
Deposit date:2016-07-10
Release date:2016-09-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural insights into Parkin substrate lysine targeting from minimal Miro substrates.
Sci Rep, 6, 2016
8IS2
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BU of 8is2 by Molmil
Crystal structure of a polyketide aromatase/cyclase Abx(+)D from Actinomycetes sp. MA7150.
Descriptor: Cyclase
Authors:Luo, S, Chen, X.
Deposit date:2023-03-20
Release date:2024-02-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:An unusual aromatase/cyclase programs the formation of the phenyldimethylanthrone framework in anthrabenzoxocinones and fasamycin.
Proc.Natl.Acad.Sci.USA, 121, 2024
1YVS
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BU of 1yvs by Molmil
Trimeric domain swapped barnase
Descriptor: BARNASE, SULFATE ION
Authors:Zegers, I, Wyns, L.
Deposit date:1998-12-10
Release date:1999-02-02
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Trimeric domain-swapped barnase.
Proc.Natl.Acad.Sci.USA, 96, 1999
1YYY
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BU of 1yyy by Molmil
Trypsin inhibitors with rigid tripeptidyl aldehydes
Descriptor: 2-{(3S)-3-[(benzylsulfonyl)amino]-2-oxopiperidin-1-yl}-N-{(2S)-1-[(3S)-1-carbamimidoylpiperidin-3-yl]-3-oxopropan-2-yl}acetamide, CALCIUM ION, TRYPSIN
Authors:Krishnan, R, Zhang, E, Hakansson, K, Arni, R.K, Tulinsky, A, Lim-Wilby, M.S.L, Levy, O.E, Semple, J.E, Brunck, T.K.
Deposit date:1998-06-03
Release date:1999-06-08
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Highly selective mechanism-based thrombin inhibitors: structures of thrombin and trypsin inhibited with rigid peptidyl aldehydes.
Biochemistry, 37, 1998
5KTY
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BU of 5kty by Molmil
hMiro EF hand and cGTPase domains, GDP and Ca2+ bound state
Descriptor: CALCIUM ION, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Klosowiak, J.L, Focia, P.J, Rice, S.E, Freymann, D.M.
Deposit date:2016-07-12
Release date:2016-09-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.522 Å)
Cite:Structural insights into Parkin substrate lysine targeting from minimal Miro substrates.
Sci Rep, 6, 2016
1YVE
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BU of 1yve by Molmil
ACETOHYDROXY ACID ISOMEROREDUCTASE COMPLEXED WITH NADPH, MAGNESIUM AND INHIBITOR IPOHA (N-HYDROXY-N-ISOPROPYLOXAMATE)
Descriptor: ACETOHYDROXY ACID ISOMEROREDUCTASE, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Biou, V, Dumas, R, Cohen-Addad, C, Douce, R, Job, D, Pebay-Peyroula, E.
Deposit date:1996-10-11
Release date:1997-09-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The crystal structure of plant acetohydroxy acid isomeroreductase complexed with NADPH, two magnesium ions and a herbicidal transition state analog determined at 1.65 A resolution.
EMBO J., 16, 1997
1Y3B
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BU of 1y3b by Molmil
Crystal structure of the complex of subtilisin BPN' with chymotrypsin inhibitor 2 E60S mutant
Descriptor: CALCIUM ION, CITRIC ACID, POLYETHYLENE GLYCOL (N=34), ...
Authors:Radisky, E.S, Lu, C.J, Kwan, G, Koshland Jr, D.E.
Deposit date:2004-11-24
Release date:2005-05-17
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Role of the intramolecular hydrogen bond network in the inhibitory power of chymotrypsin inhibitor 2
Biochemistry, 44, 2005
1Y48
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BU of 1y48 by Molmil
Crystal structure of the complex of subtilisin BPN' with chymotrypsin inhibitor 2 R65A mutant
Descriptor: CALCIUM ION, CITRIC ACID, POLYETHYLENE GLYCOL (N=34), ...
Authors:Radisky, E.S, Lu, C.J, Kwan, G, Koshland Jr, D.E.
Deposit date:2004-11-30
Release date:2005-05-17
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Role of the intramolecular hydrogen bond network in the inhibitory power of chymotrypsin inhibitor 2
Biochemistry, 44, 2005
6H3B
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BU of 6h3b by Molmil
Lysozyme: Machining protein microcrystals for structure determination by electron diffraction
Descriptor: CHLORIDE ION, Lysozyme C
Authors:Duyvesteyn, H.M.E, Ginn, H.M, Stuart, D.I.
Deposit date:2018-07-18
Release date:2018-09-12
Last modified:2022-03-30
Method:ELECTRON CRYSTALLOGRAPHY (1.9 Å)
Cite:Machining protein microcrystals for structure determination by electron diffraction.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5L7K
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BU of 5l7k by Molmil
The crystal structure of myristoylated NPHP3 peptide in complex with UNC119a
Descriptor: GLY-THR-ALA-SER-SER-LEU, MYRISTIC ACID, Protein unc-119 homolog A
Authors:Fansa, E.K, Jaiswal, M, Wittinghofer, A.
Deposit date:2016-06-03
Release date:2016-08-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Novel Biochemical and Structural Insights into the Interaction of Myristoylated Cargo with Unc119 Protein and Their Release by Arl2/3.
J.Biol.Chem., 291, 2016
3J4G
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BU of 3j4g by Molmil
Structure of lysozyme solved by MicroED to 2.9 A
Descriptor: Lysozyme C
Authors:Shi, D, Nannenga, B.L, Iadanza, M.G, Gonen, T.
Deposit date:2013-08-12
Release date:2013-11-13
Last modified:2015-04-15
Method:ELECTRON CRYSTALLOGRAPHY (2.901 Å)
Cite:Three-dimensional electron crystallography of protein microcrystals.
Elife, 2, 2013
4ARC
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BU of 4arc by Molmil
Ternary complex of E. coli leucyl-tRNA synthetase, tRNA(leu) and leucine in the editing conformation
Descriptor: LEUCINE, LEUCINE--TRNA LIGASE, MAGNESIUM ION, ...
Authors:Palencia, A, Crepin, T, Vu, M.T, Lincecum Jr, T.L, Martinis, S.A, Cusack, S.
Deposit date:2012-04-23
Release date:2012-06-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Dynamics of the Aminoacylation and Proofreading Functional Cycle of Bacterial Leucyl-tRNA Synthetase
Nat.Struct.Mol.Biol., 19, 2012
8ORV
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BU of 8orv by Molmil
Crystal structure of monkeypox virus poxin in complex with the STING agonist MD1203
Descriptor: 9-[(1~{S},6~{R},8~{R},9~{R},10~{R},15~{R},17~{R},18~{R})-8-(6-aminopurin-9-yl)-9,18-bis(fluoranyl)-3,12-bis(oxidanyl)-3,12-bis(oxidanylidene)-2,4,7,11,13-pentaoxa-3$l^{5},12$l^{5}-diphosphatricyclo[13.2.1.0^{6,10}]octadecan-17-yl]-1~{H}-purin-6-one, MPXVgp165
Authors:Duchoslav, V, Klima, M, Boura, E.
Deposit date:2023-04-17
Release date:2023-12-20
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Fluorinated cGAMP analogs, which act as STING agonists and are not cleavable by poxins: Structural basis of their function.
Structure, 32, 2024
8P45
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Crystal structure of human STING in complex with the agonist MD1202D
Descriptor: 9-[(1~{S},3~{R},6~{R},8~{R},9~{R},10~{R},12~{R},15~{R},17~{R},18~{R})-8-(6-aminopurin-9-yl)-9,18-bis(fluoranyl)-3,12-bis(oxidanylidene)-3,12-bis(sulfanyl)-2,4,7,11,13-pentaoxa-3$l^{5},12$l^{5}-diphosphatricyclo[13.2.1.0^{6,10}]octadecan-17-yl]-1~{H}-purin-6-one, Stimulator of interferon genes protein
Authors:Klima, M, Boura, E.
Deposit date:2023-05-19
Release date:2023-12-20
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (3.23 Å)
Cite:Fluorinated cGAMP analogs, which act as STING agonists and are not cleavable by poxins: Structural basis of their function.
Structure, 32, 2024
8P44
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Crystal structure of monkeypox virus poxin in complex with the STING agonist MD1202D
Descriptor: 9-[(1~{S},3~{R},6~{R},8~{R},9~{R},10~{R},12~{R},15~{R},17~{R},18~{R})-8-(6-aminopurin-9-yl)-9,18-bis(fluoranyl)-3,12-bis(oxidanylidene)-3,12-bis(sulfanyl)-2,4,7,11,13-pentaoxa-3$l^{5},12$l^{5}-diphosphatricyclo[13.2.1.0^{6,10}]octadecan-17-yl]-1~{H}-purin-6-one, MPXVgp165
Authors:Duchoslav, V, Klima, M, Boura, E.
Deposit date:2023-05-19
Release date:2023-12-20
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Fluorinated cGAMP analogs, which act as STING agonists and are not cleavable by poxins: Structural basis of their function.
Structure, 32, 2024
8ORW
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Crystal structure of human STING in complex with the agonist MD1203
Descriptor: 9-[(1~{S},6~{R},8~{R},9~{R},10~{R},15~{R},17~{R},18~{R})-8-(6-aminopurin-9-yl)-9,18-bis(fluoranyl)-3,12-bis(oxidanyl)-3,12-bis(oxidanylidene)-2,4,7,11,13-pentaoxa-3$l^{5},12$l^{5}-diphosphatricyclo[13.2.1.0^{6,10}]octadecan-17-yl]-1~{H}-purin-6-one, Stimulator of interferon protein
Authors:Klima, M, Boura, E.
Deposit date:2023-04-17
Release date:2023-12-20
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Fluorinated cGAMP analogs, which act as STING agonists and are not cleavable by poxins: Structural basis of their function.
Structure, 32, 2024

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