Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5UNW
DownloadVisualize
BU of 5unw by Molmil
Structure of rat neuronal nitric oxide synthase heme domain in complex with 3-[2-(2-amino-4-methylquinolin-7-yl)ethyl]-5-((methylamino)methyl)benzonitrile
Descriptor: 3-[2-(2-amino-4-methylquinolin-7-yl)ethyl]-5-[(methylamino)methyl]benzonitrile, 5,6,7,8-TETRAHYDROBIOPTERIN, ACETATE ION, ...
Authors:Li, H, Poulos, T.L.
Deposit date:2017-01-31
Release date:2017-05-03
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.044 Å)
Cite:Nitrile in the Hole: Discovery of a Small Auxiliary Pocket in Neuronal Nitric Oxide Synthase Leading to the Development of Potent and Selective 2-Aminoquinoline Inhibitors.
J. Med. Chem., 60, 2017
4E4Z
DownloadVisualize
BU of 4e4z by Molmil
Oxidized (Cu2+) peptidylglycine alpha-hydroxylating monooxygenase (PHM) in complex with hydrogen peroxide (1.98 A)
Descriptor: COPPER (II) ION, GLYCEROL, HYDROGEN PEROXIDE, ...
Authors:Rudzka, K, Amzel, L.M.
Deposit date:2012-03-13
Release date:2013-01-23
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Coordination of peroxide to the Cu(M) center of peptidylglycine alpha-hydroxylating monooxygenase (PHM): structural and computational study.
J.Biol.Inorg.Chem., 18, 2013
5V8K
DownloadVisualize
BU of 5v8k by Molmil
Homodimeric reaction center of H. modesticaldum
Descriptor: 1-[GLYCEROLYLPHOSPHONYL]-2-[8-(2-HEXYL-CYCLOPROPYL)-OCTANAL-1-YL]-3-[HEXADECANAL-1-YL]-GLYCEROL, 4,4'-Diaponeurosporene, 8(1)-OH-Chlorophyll aF, ...
Authors:Gisriel, C, Sarrou, I, Ferlez, B, Golbeck, J, Redding, K.E, Fromme, R.
Deposit date:2017-03-22
Release date:2017-09-06
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of a symmetric photosynthetic reaction center-photosystem.
Science, 357, 2017
4ZG7
DownloadVisualize
BU of 4zg7 by Molmil
Structural basis for inhibition of human autotaxin by four novel compounds
Descriptor: (2R)-2-hydroxy-3-(phosphonooxy)propyl tetradecanoate, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3-({6-chloro-7-fluoro-2-methyl-1-[2-oxo-2-(spiro[cyclopropane-1,3'-indol]-1'(2'H)-yl)ethyl]-1H-indol-3-yl}sulfanyl)-2-fluorobenzoic acid, ...
Authors:Stein, A.J, Bain, G, Hutchinson, J.H, Evans, J.F.
Deposit date:2015-04-22
Release date:2015-10-14
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural Basis for Inhibition of Human Autotaxin by Four Potent Compounds with Distinct Modes of Binding.
Mol.Pharmacol., 88, 2015
4JZR
DownloadVisualize
BU of 4jzr by Molmil
Structure of Prolyl Hydroxylase Domain-containing Protein (PHD) with Inhibitors
Descriptor: 1,2-ETHANEDIOL, 2-(biphenyl-4-yl)-8-[(1-methyl-1H-imidazol-2-yl)methyl]-2,8-diazaspiro[4.5]decan-1-one, Egl nine homolog 1, ...
Authors:Ma, Y, Yang, L.
Deposit date:2013-04-03
Release date:2013-10-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Novel complex crystal structure of prolyl hydroxylase domain-containing protein 2 (PHD2): 2,8-Diazaspiro[4.5]decan-1-ones as potent, orally bioavailable PHD2 inhibitors
Bioorg.Med.Chem., 21, 2013
5DKP
DownloadVisualize
BU of 5dkp by Molmil
Crystal Structure of N. meningitidis ClpP in complex with agonist ADEP A54556.
Descriptor: ATP-dependent Clp protease proteolytic subunit, POTASSIUM ION, SODIUM ION, ...
Authors:Goodreid, J.D, Janetzko, J, Santa Maria Jr, J.P, Wong, K, Leung, E, Eger, B.T, Bryson, S, Pai, E.F, Gray-Owen, S.D, Walker, S, Houry, W.A, Batey, R.A.
Deposit date:2015-09-03
Release date:2016-01-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.381 Å)
Cite:Development and Characterization of Potent Cyclic Acyldepsipeptide Analogues with Increased Antimicrobial Activity.
J.Med.Chem., 59, 2016
5V2T
DownloadVisualize
BU of 5v2t by Molmil
Ethylene forming enzyme in complex with manganese and tartrate
Descriptor: 2-oxoglutarate-dependent ethylene/succinate-forming enzyme, L(+)-TARTARIC ACID, MANGANESE (II) ION
Authors:Fellner, M, Martinez, S, Hu, J, Hausinger, R.P.
Deposit date:2017-03-06
Release date:2017-08-16
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (1.227 Å)
Cite:Structures and Mechanisms of the Non-Heme Fe(II)- and 2-Oxoglutarate-Dependent Ethylene-Forming Enzyme: Substrate Binding Creates a Twist.
J. Am. Chem. Soc., 139, 2017
4EH1
DownloadVisualize
BU of 4eh1 by Molmil
Crystal Structure of the Flavohem-like-FAD/NAD Binding Domain of Nitric Oxide Dioxygenase from Vibrio cholerae O1 biovar El Tor
Descriptor: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, Flavohemoprotein, ...
Authors:Kim, Y, Gu, M, Hasseman, J, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-04-02
Release date:2012-04-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of the Flavohem-like-FAD/NAD Binding Domain of Nitric Oxide Dioxygenase from Vibrio cholerae O1 biovar El Tor
To be Published
3DQX
DownloadVisualize
BU of 3dqx by Molmil
chicken c-Src kinase domain in complex with ATPgS
Descriptor: ADENOSINE MONOPHOSPHATE, Proto-oncogene tyrosine-protein kinase Src
Authors:Azam, M, Seeliger, M.A, Gray, N, Kuriyan, J, Daley, G.Q.
Deposit date:2008-07-09
Release date:2008-09-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Activation of tyrosine kinases by mutation of the gatekeeper threonine.
Nat.Struct.Mol.Biol., 15, 2008
4ELD
DownloadVisualize
BU of 4eld by Molmil
Crystal Structure of an Activated Variant of Small Heat Shock Protein Hsp16.5
Descriptor: Small heat shock protein HSP16.5
Authors:Spiller, B.W, Mchaourab, H.S, Lin, Y.-L.
Deposit date:2012-04-10
Release date:2012-06-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.701 Å)
Cite:Crystal structure of an activated variant of small heat shock protein hsp16.5.
Biochemistry, 51, 2012
4EQR
DownloadVisualize
BU of 4eqr by Molmil
Crystal structure of the Y361F mutant of Staphylococcus aureus CoADR
Descriptor: CHLORIDE ION, COENZYME A, Coenzyme A disulfide reductase, ...
Authors:Wallace, B.D, Edwards, J.S, Wallen, J.R, Claiborne, A, Redinbo, M.R.
Deposit date:2012-04-19
Release date:2012-10-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Turnover-Dependent Covalent Inactivation of Staphylococcus aureus Coenzyme A-Disulfide Reductase by Coenzyme A-Mimetics: Mechanistic and Structural Insights.
Biochemistry, 51, 2012
5BQX
DownloadVisualize
BU of 5bqx by Molmil
Crystal structure of human STING in complex with 3'2'-cGAMP
Descriptor: 3'2'-cGAMP, Stimulator of interferon genes protein
Authors:Wu, J, Zhang, X, Chen, Z.J, Chen, C.
Deposit date:2015-05-29
Release date:2015-06-24
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular basis for the specific recognition of the metazoan cyclic GMP-AMP by the innate immune adaptor protein STING.
Proc.Natl.Acad.Sci.USA, 112, 2015
4EMW
DownloadVisualize
BU of 4emw by Molmil
Crystal Structure of Staphylococcus aureus bound with the covalent inhibitor EtVC-CoA
Descriptor: CHLORIDE ION, Coenzyme A disulfide reductase, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Edwards, J.S, Wallace, B.D, Claiborne, A, Redinbo, M.R.
Deposit date:2012-04-12
Release date:2012-10-17
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Turnover-Dependent Covalent Inactivation of Staphylococcus aureus Coenzyme A-Disulfide Reductase by Coenzyme A-Mimetics: Mechanistic and Structural Insights.
Biochemistry, 51, 2012
3DW3
DownloadVisualize
BU of 3dw3 by Molmil
Proteinase K by Classical hanging drop method before high X Ray dose on ESRF ID 14-2 beamline
Descriptor: CALCIUM ION, Proteinase K
Authors:Pechkova, E, Tripathi, S.K, Nicolini, C.
Deposit date:2008-07-21
Release date:2009-07-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (0.99 Å)
Cite:Radiation damage in protein structural characterization by Synchrotron Radiation: State of the art and Nanotechnology-based perspective
To be Published
4ZS3
DownloadVisualize
BU of 4zs3 by Molmil
Structural complex of 5-aminofluorescein bound to the FTO protein
Descriptor: 2-OXOGLUTARIC ACID, 5-amino-2-(6-hydroxy-3-oxo-3H-xanthen-9-yl)benzoic acid, Alpha-ketoglutarate-dependent dioxygenase FTO, ...
Authors:Wang, T, Hong, T, Huang, Y, Yang, C.G, Zhou, X.
Deposit date:2015-05-13
Release date:2015-11-04
Last modified:2015-11-18
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Fluorescein Derivatives as Bifunctional Molecules for the Simultaneous Inhibiting and Labeling of FTO Protein
J.Am.Chem.Soc., 137, 2015
2Y8O
DownloadVisualize
BU of 2y8o by Molmil
Crystal structure of human p38alpha complexed with a MAPK docking peptide
Descriptor: DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 6, MITOGEN-ACTIVATED PROTEIN KINASE 14
Authors:Barkai, T, Garai, A, Toeroe, I, Remenyi, A.
Deposit date:2011-02-08
Release date:2012-02-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Specificity of Linear Motifs that Bind to a Common Mitogen-Activated Protein Kinase Docking Groove.
Sci. Signal, 5, 2012
4EK1
DownloadVisualize
BU of 4ek1 by Molmil
Crystal Structure of Electron-Spin Labeled Cytochrome P450cam
Descriptor: CAMPHOR, Camphor 5-monooxygenase, POTASSIUM ION, ...
Authors:Lee, Y.-T, Goodin, D.B.
Deposit date:2012-04-08
Release date:2012-07-25
Last modified:2012-08-29
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Double electron-electron resonance shows cytochrome P450cam undergoes a conformational change in solution upon binding substrate.
Proc.Natl.Acad.Sci.USA, 109, 2012
5B7V
DownloadVisualize
BU of 5b7v by Molmil
Human FGFR1 kinase in complex with CH5183284
Descriptor: Fibroblast growth factor receptor 1, SULFATE ION, [5-amino-1-(2-methyl-1H-benzimidazol-6-yl)-1H-pyrazol-4-yl](1H-indol-2-yl)methanone
Authors:Fukami, T.A, Lukacs, C.M, Janson, C.
Deposit date:2016-06-09
Release date:2016-06-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The fibroblast growth factor receptor genetic status as a potential predictor of the sensitivity to CH5183284/Debio 1347, a novel selective FGFR inhibitor
Mol.Cancer Ther., 13, 2014
3DQW
DownloadVisualize
BU of 3dqw by Molmil
c-Src kinase domain Thr338Ile mutant in complex with ATPgS
Descriptor: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Proto-oncogene tyrosine-protein kinase Src
Authors:Azam, M, Seeliger, M.A, Gray, N, Kuriyan, J, Daley, G.Q.
Deposit date:2008-07-09
Release date:2008-09-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.017 Å)
Cite:Activation of tyrosine kinases by mutation of the gatekeeper threonine.
Nat.Struct.Mol.Biol., 15, 2008
4ZS2
DownloadVisualize
BU of 4zs2 by Molmil
Structural complex of FTO/fluorescein
Descriptor: 2-(6-HYDROXY-3-OXO-3H-XANTHEN-9-YL)-BENZOIC ACID, 2-OXOGLUTARIC ACID, Alpha-ketoglutarate-dependent dioxygenase FTO, ...
Authors:Wang, T, Hong, T, Huang, Y, Yang, C.G, Zhou, X.
Deposit date:2015-05-13
Release date:2015-11-04
Last modified:2015-11-18
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Fluorescein Derivatives as Bifunctional Molecules for the Simultaneous Inhibiting and Labeling of FTO Protein
J.Am.Chem.Soc., 137, 2015
4ZXV
DownloadVisualize
BU of 4zxv by Molmil
Streptomyces peucetius nitrososynthase DnmZ in ligand-free state
Descriptor: DnmZ
Authors:Sartor, L.M, Vey, J.L.
Deposit date:2015-05-20
Release date:2015-10-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of DnmZ, a nitrososynthase in the Streptomyces peucetius anthracycline biosynthetic pathway.
Acta Crystallogr F Struct Biol Commun, 71, 2015
3ARQ
DownloadVisualize
BU of 3arq by Molmil
Crystal Structure Analysis of Chitinase A from Vibrio harveyi with novel inhibitors - complex structure with IDARUBICIN
Descriptor: Chitinase A, GLYCEROL, IDARUBICIN
Authors:Pantoom, S, Vetter, I.R, Prinz, H, Suginta, W.
Deposit date:2010-12-09
Release date:2011-04-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Potent family-18 chitinase inhibitors: x-ray structures, affinities, and binding mechanisms
J.Biol.Chem., 286, 2011
3AS3
DownloadVisualize
BU of 3as3 by Molmil
Crystal Structure Analysis of Chitinase A from Vibrio harveyi with novel inhibitors - W275G mutant complex structure with 2-(imidazolin-2-yl)-5-isothiocyanatobenzofuran
Descriptor: 2-(5-isothiocyanato-1-benzofuran-2-yl)-4,5-dihydro-1H-imidazole, Chitinase A, GLYCEROL
Authors:Pantoom, S, Vetter, I.R, Prinz, H, Suginta, W.
Deposit date:2010-12-09
Release date:2011-04-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Potent family-18 chitinase inhibitors: x-ray structures, affinities, and binding mechanisms
J.Biol.Chem., 286, 2011
4ZV8
DownloadVisualize
BU of 4zv8 by Molmil
Structure of CYP2B6 (Y226H/K262R) with additional mutation Y244W in complex with alpha-Pinene
Descriptor: (+)-alpha-Pinene, 5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE, Cytochrome P450 2B6, ...
Authors:Liu, J, Shah, M.B, Stout, C.D, Halpert, J.R.
Deposit date:2015-05-18
Release date:2016-03-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Coumarin Derivatives as Substrate Probes of Mammalian Cytochromes P450 2B4 and 2B6: Assessing the Importance of 7-Alkoxy Chain Length, Halogen Substitution, and Non-Active Site Mutations.
Biochemistry, 55, 2016
4FFV
DownloadVisualize
BU of 4ffv by Molmil
Crystal Structure of Dipeptidyl Peptidase IV (DPP4, DPP-IV, CD26) in Complex with 11A19 Fab
Descriptor: 11A19 Fab heavy chain, 11A19 Fab light chain, Dipeptidyl peptidase 4
Authors:Wang, Z, Sudom, A, Walker, N.P, Min, X.
Deposit date:2012-06-01
Release date:2012-12-12
Last modified:2021-05-19
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:An Inhibitory Antibody Against DPP IV Improves Glucose Tolerance in vivo - Validation of Large Molecule Approach for DPP IV Inhibition
To be published

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon