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3PC6
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BU of 3pc6 by Molmil
X-ray crystal structure of the second XRCC1 BRCT domain.
Descriptor: DNA repair protein XRCC1
Authors:Cuneo, M.J, Krahn, J.M, London, R.E.
Deposit date:2010-10-21
Release date:2011-06-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The structural basis for partitioning of the XRCC1/DNA ligase III-{alpha} BRCT-mediated dimer complexes.
Nucleic Acids Res., 39, 2011
1QJB
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BU of 1qjb by Molmil
14-3-3 ZETA/PHOSPHOPEPTIDE COMPLEX (MODE 1)
Descriptor: 14-3-3 PROTEIN ZETA/DELTA, PHOSPHOPEPTIDE
Authors:Rittinger, K, Budman, J, Xu, J, Volinia, S, Cantley, L.C, Smerdon, S.J, Gamblin, S.J, Yaffe, M.B.
Deposit date:1999-06-23
Release date:1999-09-15
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Analysis of 14-3-3 Phosphopeptide Complexes Identifies a Dual Role for the Nuclear Export Signal of 14-3-3 in Ligand Binding
Mol.Cell, 4, 1999
1K3O
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BU of 1k3o by Molmil
Crystal Structure Analysis of apo Glutathione S-Transferase
Descriptor: GLUTATHIONE S-TRANSFERASE A1
Authors:Le Trong, I, Stenkamp, R.E, Ibarra, C, Atkins, W.M, Adman, E.T.
Deposit date:2001-10-03
Release date:2002-10-30
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:1.3-A resolution structure of human glutathione S-transferase with S-hexyl glutathione bound reveals possible extended ligandin binding site.
Proteins, 48, 2002
6U3K
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BU of 6u3k by Molmil
The crystal structure of 4-(pyridin-2-yl)benzoate-bound CYP199A4
Descriptor: 4-(pyridin-2-yl)benzoic acid, CHLORIDE ION, Cytochrome P450, ...
Authors:Podgorski, M.N, Bruning, J.B, Bell, S.G.
Deposit date:2019-08-21
Release date:2020-02-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Biophysical Techniques for Distinguishing Ligand Binding Modes in Cytochrome P450 Monooxygenases.
Biochemistry, 59, 2020
2DXC
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BU of 2dxc by Molmil
Recombinant thiocyanate hydrolase, fully-matured form
Descriptor: COBALT (III) ION, L(+)-TARTARIC ACID, Thiocyanate hydrolase subunit alpha, ...
Authors:Arakawa, T, Kawano, Y, Katayama, Y, Yohda, M, Odaka, M.
Deposit date:2006-08-25
Release date:2007-08-28
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Basis for Catalytic Activation of Thiocyanate Hydrolase Involving Metal-Ligated Cysteine Modification
J.Am.Chem.Soc., 131, 2009
3V7D
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BU of 3v7d by Molmil
Crystal Structure of ScSkp1-ScCdc4-pSic1 peptide complex
Descriptor: Cell division control protein 4, Protein SIC1, Suppressor of kinetochore protein 1
Authors:Tang, X, Orlicky, S, Mittag, T, Csizmok, V, Pawson, T, Forman-Kay, J, Sicheri, F, Tyers, M.
Deposit date:2011-12-20
Release date:2012-05-02
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.306 Å)
Cite:Composite low affinity interactions dictate recognition of the cyclin-dependent kinase inhibitor Sic1 by the SCFCdc4 ubiquitin ligase.
Proc.Natl.Acad.Sci.USA, 109, 2012
1QJA
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BU of 1qja by Molmil
14-3-3 ZETA/PHOSPHOPEPTIDE COMPLEX (MODE 2)
Descriptor: 14-3-3 PROTEIN ZETA, PHOSPHOPEPTIDE
Authors:Rittinger, K, Budman, J, Xu, J, Volinia, S, Cantley, L.C, Smerdon, S.J, Gamblin, S.J, Yaffe, M.B.
Deposit date:1999-06-23
Release date:1999-09-15
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Analysis of 14-3-3 Phosphopeptide Complexes Identifies a Dual Role for the Nuclear Export Signal of 14-3-3 in Ligand Binding
Mol.Cell, 4, 1999
6OVP
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BU of 6ovp by Molmil
Sterol Carrier Protein 2 from Yarrowia Lipolytica (apo form)
Descriptor: Fatty acid-binding protein, PHOSPHATE ION
Authors:Gianotti, A.R, Klinke, S, Ermacora, M.R.
Deposit date:2019-05-08
Release date:2020-05-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.991 Å)
Cite:The structure of unliganded sterol carrier protein 2 from Yarrowia lipolytica unveils a mechanism for binding site occlusion.
J.Struct.Biol., 213, 2020
9IXD
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BU of 9ixd by Molmil
Crystal structure of Copper-bound N(omega)-hydroxy-L-arginine hydrolase with oxidized Cys86
Descriptor: COPPER (I) ION, COPPER (II) ION, MAGNESIUM ION, ...
Authors:Oda, K, Matoba, Y.
Deposit date:2024-07-27
Release date:2024-11-20
Last modified:2025-01-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Copper inactivates DcsB by oxidizing the metal ligand Cys86 to sulfinic acid.
Febs J., 291, 2024
9IXF
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BU of 9ixf by Molmil
Crystal structure of Manganese-free N(omega)-hydroxy-L-arginine hydrolase with oxidized Cys86.
Descriptor: MAGNESIUM ION, MANGANESE (II) ION, N(omega)-hydroxy-L-arginine amidinohydrolase
Authors:Oda, K, Matoba, Y.
Deposit date:2024-07-27
Release date:2024-11-20
Last modified:2025-01-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Copper inactivates DcsB by oxidizing the metal ligand Cys86 to sulfinic acid.
Febs J., 291, 2024
9IXE
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BU of 9ixe by Molmil
Crystal structure of Copper-bound N(omega)-hydroxy-L-arginine hydrolase without oxidized Cys86
Descriptor: COPPER (I) ION, MAGNESIUM ION, MANGANESE (II) ION, ...
Authors:Oda, K, Matoba, Y.
Deposit date:2024-07-27
Release date:2024-11-20
Last modified:2025-01-01
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Copper inactivates DcsB by oxidizing the metal ligand Cys86 to sulfinic acid.
Febs J., 291, 2024
4NPP
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BU of 4npp by Molmil
The GLIC-His10 wild-type structure in equilibrium between the open and locally-closed (LC) forms
Descriptor: NICKEL (II) ION, Proton-gated ion channel
Authors:Sauguet, L, Shahsavar, A, Poitevin, F, Huon, C, Menny, A, Nemecz, A, Haouz, A, Changeux, J.P, Corringer, P.J, Delarue, M.
Deposit date:2013-11-22
Release date:2013-12-25
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Crystal structures of a pentameric ligand-gated ion channel provide a mechanism for activation.
Proc.Natl.Acad.Sci.USA, 111, 2014
9IXC
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BU of 9ixc by Molmil
Crystal structure of Manganese-rebound N(omega)-hydroxy-L-arginine hydrolase with oxidized Cys86
Descriptor: MAGNESIUM ION, MANGANESE (II) ION, N(omega)-hydroxy-L-arginine amidinohydrolase
Authors:Oda, K, Matoba, Y.
Deposit date:2024-07-27
Release date:2024-11-20
Last modified:2025-01-01
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Copper inactivates DcsB by oxidizing the metal ligand Cys86 to sulfinic acid.
Febs J., 291, 2024
9IXG
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BU of 9ixg by Molmil
Crystal structure of Manganese-free N(omega)-hydroxy-L-arginine hydrolase without oxidized Cys86
Descriptor: MAGNESIUM ION, MANGANESE (II) ION, N(omega)-hydroxy-L-arginine amidinohydrolase
Authors:Oda, K, Matoba, Y.
Deposit date:2024-07-27
Release date:2024-11-20
Last modified:2025-01-01
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Copper inactivates DcsB by oxidizing the metal ligand Cys86 to sulfinic acid.
Febs J., 291, 2024
3HB8
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BU of 3hb8 by Molmil
Structures of Thymidylate Synthase R163K with Substrates and Inhibitors Show Subunit Asymmetry
Descriptor: 1,2-ETHANEDIOL, 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, PHOSPHATE ION, ...
Authors:Gibson, L.M, Lovelace, L.L, Lebioda, L.
Deposit date:2009-05-04
Release date:2010-05-26
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Structures of human thymidylate synthase R163K with dUMP, FdUMP and glutathione show asymmetric ligand binding.
Acta Crystallogr.,Sect.D, 67, 2011
2EG8
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BU of 2eg8 by Molmil
The crystal structure of E. coli dihydroorotase complexed with 5-fluoroorotic acid
Descriptor: 5-FLUORO-2,6-DIOXO-1,2,3,6-TETRAHYDROPYRIMIDINE-4-CARBOXYLIC ACID, Dihydroorotase, ZINC ION
Authors:Lee, M, Maher, M.J, Guss, J.M.
Deposit date:2007-02-28
Release date:2007-07-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of Ligand-free and Inhibitor Complexes of Dihydroorotase from Escherichia coli: Implications for Loop Movement in Inhibitor Design
J.Mol.Biol., 370, 2007
3PLY
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BU of 3ply by Molmil
Structure of Oxidized P96G Mutant of Amicyanin
Descriptor: Amicyanin, COPPER (II) ION, PHOSPHATE ION, ...
Authors:Sukumar, N, Davidson, V.L.
Deposit date:2010-11-15
Release date:2011-02-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Proline 96 of the copper ligand loop of amicyanin regulates electron transfer from methylamine dehydrogenase by positioning other residues at the protein-protein interface.
Biochemistry, 50, 2011
6H7Y
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BU of 6h7y by Molmil
X-ray structure of human glutamate carboxypeptidase II (GCPII) in complex with a inhibitor RNA 1-79-1
Descriptor: (2~{S})-2-[[(2~{S})-6-[(4-fluorophenyl)amino]-1-oxidanyl-1,6-bis(oxidanylidene)hexan-2-yl]carbamoylamino]pentanedioic acid, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Motlova, L, Novakova, Z, Barinka, C.
Deposit date:2018-07-31
Release date:2018-12-05
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:2-Aminoadipic Acid-C(O)-Glutamate Based Prostate-Specific Membrane Antigen Ligands for Potential Use as Theranostics.
ACS Med Chem Lett, 9, 2018
6QIR
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BU of 6qir by Molmil
Crystal structure of CAG repeats with synthetic CMBL3a compound (model I)
Descriptor: CMBL3a, RNA (5'-R(*GP*CP*AP*GP*CP*AP*GP*C)-3')
Authors:Kiliszek, A, Blaszczyk, L, Rypniewski, W, Nakatani, K.
Deposit date:2019-01-21
Release date:2019-09-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.531 Å)
Cite:Structural insights into synthetic ligands targeting A-A pairs in disease-related CAG RNA repeats.
Nucleic Acids Res., 47, 2019
6U30
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BU of 6u30 by Molmil
The crystal structure of 4-pyridin-3-ylbenzoate-bound CYP199A4
Descriptor: 4-(pyridin-3-yl)benzoic acid, ACETATE ION, CHLORIDE ION, ...
Authors:Podgorski, M.N, Bruning, J.B, Bell, S.G.
Deposit date:2019-08-21
Release date:2020-02-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.655 Å)
Cite:Biophysical Techniques for Distinguishing Ligand Binding Modes in Cytochrome P450 Monooxygenases.
Biochemistry, 59, 2020
3H9K
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BU of 3h9k by Molmil
Structures of Thymidylate Synthase R163K with Substrates and Inhibitors Show Subunit Asymmetry
Descriptor: 1,2-ETHANEDIOL, 5-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE, PHOSPHATE ION, ...
Authors:Gibson, L.M, Lovelace, L.L, Lebioda, L.
Deposit date:2009-04-30
Release date:2010-05-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structures of human thymidylate synthase R163K with dUMP, FdUMP and glutathione show asymmetric ligand binding.
Acta Crystallogr.,Sect.D, 67, 2011
3VHB
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BU of 3vhb by Molmil
IMIDAZOLE ADDUCT OF THE BACTERIAL HEMOGLOBIN FROM VITREOSCILLA SP.
Descriptor: IMIDAZOLE, PROTEIN (HEMOGLOBIN), PROTOPORPHYRIN IX CONTAINING FE
Authors:Bolognesi, M, Boffi, A, Coletta, M, Mozzarelli, A, Pesce, A, Tarricone, C, Ascenzi, P.
Deposit date:1999-03-17
Release date:1999-08-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Anticooperative ligand binding properties of recombinant ferric Vitreoscilla homodimeric hemoglobin: a thermodynamic, kinetic and X-ray crystallographic study.
J.Mol.Biol., 291, 1999
4YU0
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BU of 4yu0 by Molmil
Crystal structure of a tetramer of GluA2 TR mutant ligand binding domains bound with glutamate at 1.26 Angstrom resolution
Descriptor: DI(HYDROXYETHYL)ETHER, GLUTAMIC ACID, Glutamate receptor 2,Glutamate receptor 2, ...
Authors:Chebli, M, Salazar, H, Baranovic, J, Carbone, A.L, Ghisi, V, Faelber, K, Lau, A.Y, Daumke, O, Plested, A.J.R.
Deposit date:2015-03-18
Release date:2016-01-13
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Crystal structure of the tetrameric GluA2 ligand-binding domain in complex with glutamate at 1.26 Angstroms resolution
To Be Published
7BLC
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BU of 7blc by Molmil
BAZ2A bromodomain in complex with compound UP39
Descriptor: Bromodomain adjacent to zinc finger domain protein 2A, methyl 5-[(5-ethanoyl-2-ethoxy-phenyl)carbamoyl]-2-(2-piperazin-1-ylethoxy)benzoate
Authors:Dalle Vedove, A, Cazzanelli, G, Caflisch, A, Lolli, G.
Deposit date:2021-01-18
Release date:2022-03-02
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Reevaluation of bromodomain ligands targeting BAZ2A.
Protein Sci., 32, 2023
7BL8
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BU of 7bl8 by Molmil
BAZ2A bromodomain in complex with the chemical probe BAZ2-ICR
Descriptor: 4-[5-(1-methylpyrazol-4-yl)-3-[2-(1-methylpyrazol-4-yl)ethyl]imidazol-4-yl]benzenecarbonitrile, Bromodomain adjacent to zinc finger domain protein 2A
Authors:Dalle Vedove, A, Cazzanelli, G, Caflisch, A, Lolli, G.
Deposit date:2021-01-18
Release date:2022-03-02
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Reevaluation of bromodomain ligands targeting BAZ2A.
Protein Sci., 32, 2023

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