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8TZB
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Structure of the C-terminal half of LRRK2 bound to GZD-824 (I2020T mutant)
Descriptor: 4-methyl-N-{4-[(4-methylpiperazin-1-yl)methyl]-3-(trifluoromethyl)phenyl}-3-[(1H-pyrazolo[3,4-b]pyridin-5-yl)ethynyl]benzamide, Leucine-rich repeat serine/threonine-protein kinase 2, designed ankyrin repeat proteins E11
Authors:Villagran-Suarez, A, Sanz-Murillo, M, Alegrio-Louro, J, Leschziner, A.
Deposit date:2023-08-26
Release date:2023-12-06
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Inhibition of Parkinson's disease-related LRRK2 by type I and type II kinase inhibitors: Activity and structures.
Sci Adv, 9, 2023
8U8B
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BU of 8u8b by Molmil
Cryo-EM structure of LRRK2 bound to type II inhibitor rebastinib
Descriptor: 4-[4-({[3-tert-butyl-1-(quinolin-6-yl)-1H-pyrazol-5-yl]carbamoyl}amino)-3-fluorophenoxy]-N-methylpyridine-2-carboxamide, GUANOSINE-5'-DIPHOSPHATE, Leucine-rich repeat serine/threonine-protein kinase 2
Authors:Zhu, H, Sun, J.
Deposit date:2023-09-16
Release date:2024-01-31
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Pharmacology of LRRK2 with type I and II kinase inhibitors revealed by cryo-EM.
Cell Discov, 10, 2024
8U8A
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Cryo-EM structure of LRRK2 bound to type II inhibitor ponatinib
Descriptor: 3-(imidazo[1,2-b]pyridazin-3-ylethynyl)-4-methyl-N-{4-[(4-methylpiperazin-1-yl)methyl]-3-(trifluoromethyl)phenyl}benzam ide, GUANOSINE-5'-DIPHOSPHATE, Leucine-rich repeat serine/threonine-protein kinase 2
Authors:Zhu, H, Sun, J.
Deposit date:2023-09-16
Release date:2024-01-31
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Pharmacology of LRRK2 with type I and II kinase inhibitors revealed by cryo-EM.
Cell Discov, 10, 2024
8U7L
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BU of 8u7l by Molmil
Cryo-EM structure of LRRK2 bound to type II inhibitor GZD824
Descriptor: 4-methyl-N-{4-[(4-methylpiperazin-1-yl)methyl]-3-(trifluoromethyl)phenyl}-3-[(1H-pyrazolo[3,4-b]pyridin-5-yl)ethynyl]benzamide, GUANOSINE-5'-DIPHOSPHATE, Leucine-rich repeat serine/threonine-protein kinase 2
Authors:Zhu, H, Sun, J.
Deposit date:2023-09-15
Release date:2024-01-31
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Pharmacology of LRRK2 with type I and II kinase inhibitors revealed by cryo-EM.
Cell Discov, 10, 2024
8U4R
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BU of 8u4r by Molmil
Structure of REGN7663-Fab bound CXCR4
Descriptor: C-X-C chemokine receptor type 4, CHOLESTEROL, REGN7663 Fab heavy chain, ...
Authors:Saotome, K, McGoldrick, L.L, Franklin, M.C.
Deposit date:2023-09-11
Release date:2024-03-13
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural insights into CXCR4 modulation and oligomerization
Biorxiv, 2024
8U4N
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BU of 8u4n by Molmil
Structure of Apo CXCR4/Gi complex
Descriptor: C-X-C chemokine receptor type 4, CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Saotome, K, McGoldrick, L.L, Franklin, M.C.
Deposit date:2023-09-11
Release date:2024-03-13
Method:ELECTRON MICROSCOPY (2.72 Å)
Cite:Structural insights into CXCR4 modulation and oligomerization
Biorxiv, 2024
8U4T
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BU of 8u4t by Molmil
Structure of tetrameric CXCR4 in complex with REGN7663 Fab
Descriptor: (2R)-1-(hexadecanoyloxy)-3-(phosphonooxy)propan-2-yl (9Z)-octadec-9-enoate, C-X-C chemokine receptor type 4, CHOLESTEROL, ...
Authors:Saotome, K, McGoldrick, L.L, Franklin, M.C.
Deposit date:2023-09-11
Release date:2024-03-13
Method:ELECTRON MICROSCOPY (3.38 Å)
Cite:Structural insights into CXCR4 modulation and oligomerization
Biorxiv, 2024
4NL0
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BU of 4nl0 by Molmil
Structural and functional characterization of a novel Alpha Kinase in complex with ADP from Entamoeba histolytica
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Protein kinase, putative, ...
Authors:Tarique, K.F, Rehman, S.A.A, Bhattacharya, A, Gourinath, S, Mansuri, M.S.
Deposit date:2013-11-13
Release date:2014-11-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Structural and functional characterization of a novel Alpha Kinase in complex with ADP from Entamoeba histolytica
To be Published
8U4P
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BU of 8u4p by Molmil
Structure of AMD3100-bound CXCR4/Gi complex
Descriptor: C-X-C chemokine receptor type 4, CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Saotome, K, McGoldrick, L.L, Franklin, M.C.
Deposit date:2023-09-11
Release date:2024-03-13
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Structural insights into CXCR4 modulation and oligomerization
Biorxiv, 2024
8U4S
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BU of 8u4s by Molmil
Structure of trimeric CXCR4 in complex with REGN7663 Fab
Descriptor: (2R)-1-(hexadecanoyloxy)-3-(phosphonooxy)propan-2-yl (9Z)-octadec-9-enoate, C-X-C chemokine receptor type 4, CHOLESTEROL, ...
Authors:Saotome, K, McGoldrick, L.L, Franklin, M.C.
Deposit date:2023-09-11
Release date:2024-03-13
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Structural insights into CXCR4 modulation and oligomerization
Biorxiv, 2024
8U4Q
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BU of 8u4q by Molmil
Structure of REGN7663 Fab-bound CXCR4/Gi complex
Descriptor: C-X-C chemokine receptor type 4, CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Saotome, K, McGoldrick, L.L, Franklin, M.C.
Deposit date:2023-09-11
Release date:2024-03-13
Method:ELECTRON MICROSCOPY (3.36 Å)
Cite:Structural insights into CXCR4 modulation and oligomerization
Biorxiv, 2024
8UX1
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BU of 8ux1 by Molmil
Cryo-EM structure of Ran bound to RCC1 and the nucleosome core particle
Descriptor: 153-bp Widom 601 DNA forward strand, 153-bp Widom 601 DNA reverse strand, GTP-binding nuclear protein Ran, ...
Authors:Huang, S.K, Rubinstein, J.L, Kay, L.E.
Deposit date:2023-11-08
Release date:2023-11-22
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Cryo-EM structure of Ran bound to RCC1 and the nucleosome core particle
To Be Published
4ZQ0
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BU of 4zq0 by Molmil
crystal structure of Giardia 14-3-3 in complex with the phosphopeptide A8Ap
Descriptor: 14-3-3 protein, A8Ap phosphopeptide, PHOSPHATE ION
Authors:Fiorillo, A, Ilari, A.
Deposit date:2015-05-08
Release date:2016-03-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Molecular Dynamics Simulations and Structural Analysis of Giardia duodenalis 14-3-3 Protein-Protein Interactions.
J.Chem.Inf.Model., 55, 2015
1VYH
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BU of 1vyh by Molmil
PAF-AH Holoenzyme: Lis1/Alfa2
Descriptor: PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB ALPHA SUBUNIT, PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB BETA SUBUNIT
Authors:Tarricone, C, Perrina, F, Monzani, S, Massimiliano, L, Knapp, S, Tsai, L.-H, Derewenda, Z.S, Musacchio, A.
Deposit date:2004-04-30
Release date:2005-05-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Coupling Paf Signaling to Dynein Regulation: Structure of Lis1 in Complex with Paf-Acetylhydrolase.
Neuron, 44, 2004
8XW4
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BU of 8xw4 by Molmil
Cryo-EM structure of TMEM63B-Digitonin state
Descriptor: CSC1-like protein 2
Authors:Zhang, Y, Han, Y.
Deposit date:2024-01-15
Release date:2024-04-10
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.84 Å)
Cite:Mechanical activation opens a lipid-lined pore in OSCA ion channels.
Nature, 628, 2024
8YR2
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BU of 8yr2 by Molmil
Structure of NET-Nisoxetine in outward-open state
Descriptor: CHLORIDE ION, CHOLESTEROL, SODIUM ION, ...
Authors:Zhang, H, Xu, E.H, Jiang, Y.
Deposit date:2024-03-20
Release date:2024-05-29
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.89 Å)
Cite:Dimerization and antidepressant recognition at noradrenaline transporter.
Nature, 630, 2024
8Y92
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BU of 8y92 by Molmil
structure of NET-Atomoxetine in outward-open state
Descriptor: (3R)-N-methyl-3-(2-methylphenoxy)-3-phenyl-propan-1-amine, CHLORIDE ION, SODIUM ION, ...
Authors:Zhang, H, Xu, E.H, Jiang, Y.
Deposit date:2024-02-06
Release date:2024-05-29
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.29 Å)
Cite:Dimerization and antidepressant recognition at noradrenaline transporter.
Nature, 630, 2024
8Y91
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BU of 8y91 by Molmil
Structure of NET-nomifensine in outward-open state
Descriptor: (4S)-2-methyl-4-phenyl-3,4-dihydro-1H-isoquinolin-8-amine, CHLORIDE ION, SODIUM ION, ...
Authors:Zhang, H, Xu, E.H, Jiang, Y.
Deposit date:2024-02-06
Release date:2024-05-29
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:Dimerization and antidepressant recognition at noradrenaline transporter.
Nature, 630, 2024
8Y90
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BU of 8y90 by Molmil
Structure of NET-Nefopam in outward-open state
Descriptor: (1S)-5-methyl-1-phenyl-1,3,4,6-tetrahydro-2,5-benzoxazocine, CHLORIDE ION, SODIUM ION, ...
Authors:Zhang, H, Xu, E.H, Jiang, Y.
Deposit date:2024-02-06
Release date:2024-05-29
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Dimerization and antidepressant recognition at noradrenaline transporter.
Nature, 630, 2024
8Y93
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BU of 8y93 by Molmil
Structure of NET-Amitriptyline in outward-open state
Descriptor: Amitriptyline, CHLORIDE ION, SODIUM ION, ...
Authors:Zhang, H, Xu, E.H, Jiang, Y.
Deposit date:2024-02-06
Release date:2024-05-29
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Dimerization and antidepressant recognition at noradrenaline transporter.
Nature, 630, 2024
8Y94
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BU of 8y94 by Molmil
Structure of Apo human norepinephrine transporter NET
Descriptor: Sodium-dependent noradrenaline transporter
Authors:Zhang, H, Xu, H.E, Jiang, Y.
Deposit date:2024-02-06
Release date:2024-05-29
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.29 Å)
Cite:Dimerization and antidepressant recognition at noradrenaline transporter.
Nature, 630, 2024
8Y8Z
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BU of 8y8z by Molmil
Structure of NET-Maprotiline in outward-open state
Descriptor: CHLORIDE ION, SODIUM ION, Sodium-dependent noradrenaline transporter, ...
Authors:Zhang, H, Xu, E.H, Jiang, Y.
Deposit date:2024-02-06
Release date:2024-05-29
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.29 Å)
Cite:Dimerization and antidepressant recognition at noradrenaline transporter.
Nature, 630, 2024
8Y95
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BU of 8y95 by Molmil
Structure of NET-NE in Occluded state
Descriptor: CHLORIDE ION, Noradrenaline, SODIUM ION, ...
Authors:Zhang, H, Xu, H.E, Jiang, Y.
Deposit date:2024-02-06
Release date:2024-05-29
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.24 Å)
Cite:Dimerization and antidepressant recognition at noradrenaline transporter.
Nature, 630, 2024
4Y99
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BU of 4y99 by Molmil
Core domain of human cardiac troponin
Descriptor: CALCIUM ION, DIMETHYL SULFOXIDE, Troponin C, ...
Authors:Takeda, S.
Deposit date:2015-02-17
Release date:2016-03-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Core domain of human cardiac troponin
To Be Published
4PR9
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BU of 4pr9 by Molmil
Human Vinculin (residues 891-1066) in complex with PIP
Descriptor: GLYCEROL, Vinculin, [(2R)-2-octanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate
Authors:Chinthalapudi, K, Rangarajan, E.S, Patil, D, Izard, T.
Deposit date:2014-03-05
Release date:2014-12-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Mechanism and function of lipid-directed oligomerization of vinculin
To be Published

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PDB entries from 2024-08-07

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