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3Q3Y
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BU of 3q3y by Molmil
Complex structure of HEVB EV93 main protease 3C with Compound 1 (AG7404)
Descriptor: 1,2-ETHANEDIOL, AMMONIUM ION, HEVB EV93 3C protease, ...
Authors:Costenaro, L, Kaczmarska, Z, Arnan, C, Sola, M, Coutard, B, Norder, H, Canard, B, Coll, M.
Deposit date:2010-12-22
Release date:2011-09-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Structural Basis for Antiviral Inhibition of the Main Protease, 3C, from Human Enterovirus 93.
J.Virol., 85, 2011
3Q4W
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BU of 3q4w by Molmil
The structure of archaeal inorganic pyrophosphatase in complex with substrate
Descriptor: BROMIDE ION, CALCIUM ION, PYROPHOSPHATE 2-, ...
Authors:Hughes, R.C, Meehan, E.J, Coates, L, Ng, J.D.
Deposit date:2010-12-24
Release date:2012-01-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.441 Å)
Cite:Inorganic pyrophosphatase crystals from Thermococcus thioreducens for X-ray and neutron diffraction.
Acta Crystallogr.,Sect.F, 68, 2012
1Z68
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BU of 1z68 by Molmil
Crystal Structure Of Human Fibroblast Activation Protein alpha
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Aertgeerts, K, Levin, I, Shi, L, Prasad, G.S, Zhang, Y, Kraus, M.L, Salakian, S, Snell, G.P, Sridhar, V, Wijnands, R, Tennant, M.G.
Deposit date:2005-03-21
Release date:2005-04-12
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural and kinetic analysis of the substrate specificity of human fibroblast activation protein alpha.
J.Biol.Chem., 280, 2005
3N9S
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BU of 3n9s by Molmil
Class II fructose-1,6-bisphosphate aldolase from helicobacter pylori in complex with N-(4-hydroxybutyl)- glycolohydroxamic acid bis-phosphate, a competitive inhibitor
Descriptor: 4-{hydroxy[(phosphonooxy)acetyl]amino}butyl dihydrogen phosphate, CALCIUM ION, Fructose-bisphosphate aldolase, ...
Authors:Coincon, M, Sygusch, S.
Deposit date:2010-05-31
Release date:2010-11-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Rational Design, Synthesis, and Evaluation of New Selective Inhibitors of Microbial Class II (Zinc Dependent) Fructose Bis-phosphate Aldolases.
J.Med.Chem., 53, 2010
1Z9D
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BU of 1z9d by Molmil
Crystal structure of a putative uridylate kinase (UMP-kinase) from Streptococcus pyogenes
Descriptor: SULFATE ION, uridylate kinase
Authors:Rajashankar, K.R, Kniewel, R, Lee, K, Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2005-04-01
Release date:2005-04-19
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of a putative uridylate kinase (UMP-kinase) from Streptococcus pyogenes
To be Published
3PVK
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BU of 3pvk by Molmil
Secreted aspartic protease 2 in complex with benzamidine
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, BENZAMIDINE, Candidapepsin-2, ...
Authors:Koester, H, Heine, A, Klebe, G.
Deposit date:2010-12-07
Release date:2011-12-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Experimental and computational active site mapping as a starting point to fragment-based lead discovery.
Chemmedchem, 7, 2012
2QC6
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BU of 2qc6 by Molmil
Protein kinase CK2 in complex with DBC
Descriptor: 3,8-DIBROMO-7-HYDROXY-4-METHYL-2H-CHROMEN-2-ONE, Casein kinase II subunit alpha
Authors:Battistutta, R.
Deposit date:2007-06-19
Release date:2008-02-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Coumarin as attractive casein kinase 2 (CK2) inhibitor scaffold: an integrate approach to elucidate the putative binding motif and explain structure-activity relationships.
J.Med.Chem., 51, 2008
1ZJ7
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BU of 1zj7 by Molmil
Crystal structure of a complex of mutant HIV-1 protease (A71V, V82T, I84V) with a hydroxyethylamine peptidomimetic inhibitor BOC-PHE-PSI[S-CH(OH)CH2NH]-PHE-GLU-PHE-NH2
Descriptor: N-{(2S,3S)-3-[(tert-butoxycarbonyl)amino]-2-hydroxy-4-phenylbutyl}-L-phenylalanyl-L-alpha-glutamyl-L-phenylalaninamide, PROTEASE RETROPEPSIN
Authors:Skalova, T, Dohnalek, J, Duskova, J, Petrokova, H, Hasek, J.
Deposit date:2005-04-28
Release date:2006-05-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:HIV-1 protease mutations and inhibitor modifications monitored on a series of complexes. Structural basis for the effect of the A71V mutation on the active site
J.Med.Chem., 49, 2006
3O6R
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BU of 3o6r by Molmil
Crystal Structure of 4-Chlorocatechol Dioxygenase from Rhodococcus opacus 1CP in complex with pyrogallol
Descriptor: (2R)-3-(PHOSPHONOOXY)-2-(TETRADECANOYLOXY)PROPYL PALMITATE, BENZENE-1,2,3-TRIOL, Chlorocatechol 1,2-dioxygenase, ...
Authors:Ferraroni, M, Briganti, F, Kolomitseva, M, Golovleva, L.
Deposit date:2010-07-29
Release date:2011-08-17
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:X-ray structures of 4-chlorocatechol 1,2-dioxygenase adducts with substituted catechols: new perspectives in the molecular basis of intradiol ring cleaving dioxygenases specificity.
J. Struct. Biol., 181, 2013
3OEB
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BU of 3oeb by Molmil
Crystal structure of the Q121E mutant of C.polysaccharolyticus CBM16-1 bound to mannopentaose
Descriptor: CALCIUM ION, S-layer associated multidomain endoglucanase, SULFATE ION, ...
Authors:Agarwal, V, Nair, S.K.
Deposit date:2010-08-12
Release date:2010-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Mutational insights into the roles of amino acid residues in ligand binding for two closely related family 16 carbohydrate binding modules.
J.Biol.Chem., 285, 2010
2AEV
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BU of 2aev by Molmil
MJ0158, NaBH4-reduced form
Descriptor: Hypothetical protein MJ0158, SULFATE ION
Authors:Kaiser, J.T, Gromadski, K, Rother, M, Engelhardt, H, Rodnina, M.V, Wahl, M.C.
Deposit date:2005-07-24
Release date:2005-10-04
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and functional investigation of a putative archaeal selenocysteine synthase
Biochemistry, 44, 2005
2PE9
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BU of 2pe9 by Molmil
NMR Based Structure of the Open Conformation of LYS48-Linked Di-UBiquitin Using Experimental Global Rotational Diffusion Tensor from NMR Relaxation Measurements
Descriptor: Ubiquitin
Authors:Ryabov, Y, Fushman, D.
Deposit date:2007-04-02
Release date:2007-07-10
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural assembly of multidomain proteins and protein complexes guided by the overall rotational diffusion tensor.
J.Am.Chem.Soc., 129, 2007
2OP2
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BU of 2op2 by Molmil
Crystal structure of RNase double-mutant V43C R85C with extra disulphide bond
Descriptor: Ribonuclease pancreatic
Authors:Kurinov, I.
Deposit date:2007-01-26
Release date:2007-10-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Implementation of a k/k(0) Method to Identify Long-Range Structure in Transition States during Conformational Folding/Unfolding of Proteins.
Structure, 15, 2007
253L
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BU of 253l by Molmil
LYSOZYME
Descriptor: BETA-MERCAPTOETHANOL, CHLORIDE ION, LYSOZYME
Authors:Kuroki, R, Shoichet, B, Weaver, L.H, Matthews, B.W.
Deposit date:1997-11-10
Release date:1998-01-28
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:A relationship between protein stability and protein function.
Proc.Natl.Acad.Sci.USA, 92, 1995
2QU1
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BU of 2qu1 by Molmil
Crystal Structure of a Cyclized GFP Variant
Descriptor: CALCIUM ION, Green fluorescent protein
Authors:Bailey, L.J, McCoy, J.G, Bitto, E, Bingman, C.A, Fox, B.G, Wesenberg, G.E, Phillips Jr, G.N, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2007-08-03
Release date:2007-09-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of a Cyclized GFP Variant.
To be Published
2AAI
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BU of 2aai by Molmil
Crystallographic refinement of ricin to 2.5 Angstroms
Descriptor: RICIN (A CHAIN), RICIN (B CHAIN), alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Rutenber, E, Katzin, B.J, Montfort, W, Villafranca, J.E, Ernst, S.R, Collins, E.J, Mlsna, D, Monzingo, A.F, Ready, M.P, Robertus, J.D.
Deposit date:1993-09-07
Release date:1994-01-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystallographic refinement of ricin to 2.5 A.
Proteins, 10, 1991
3OLV
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BU of 3olv by Molmil
Structural and functional effects of substitution at position T+1 in CheY: CheYA88V-BeF3-Mg complex
Descriptor: BERYLLIUM TRIFLUORIDE ION, Chemotaxis protein CheY, MAGNESIUM ION, ...
Authors:Immormino, R.M, Bourret, R.B.
Deposit date:2010-08-26
Release date:2011-08-31
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.697 Å)
Cite:A Variable Active Site Residue Influences the Kinetics of Response Regulator Phosphorylation and Dephosphorylation.
Biochemistry, 55, 2016
3OLY
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BU of 3oly by Molmil
Structural and functional effects of substitution at position T+1 in CheY: CheYA88M-BeF3-Mn complex
Descriptor: BERYLLIUM TRIFLUORIDE ION, Chemotaxis protein CheY, GLYCEROL, ...
Authors:Immormino, R.M, Bourret, R.B.
Deposit date:2010-08-26
Release date:2011-08-31
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:A Variable Active Site Residue Influences the Kinetics of Response Regulator Phosphorylation and Dephosphorylation.
Biochemistry, 55, 2016
3OPD
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BU of 3opd by Molmil
Crystal Structure of the N-terminal domain of an HSP90 from Trypanosoma Brucei, Tb10.26.1080 in the presence of a benzamide derivative
Descriptor: 4-[6,6-dimethyl-4-oxo-3-(trifluoromethyl)-4,5,6,7-tetrahydro-1H-indazol-1-yl]-2-[(cis-4-hydroxycyclohexyl)amino]benzamide, Heat shock protein 83
Authors:Pizarro, J.C, Wernimont, A.K, Hutchinson, A, Sullivan, H, Chamberlain, K, Weadge, J, Cossar, D, Li, Y, Kozieradzki, I, Bochkarev, A, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Wyatt, P.G, Fairlamb, A.H, MacKenzie, C, Ferguson, M.A.J, Hui, R, Hills, T, Structural Genomics Consortium (SGC)
Deposit date:2010-08-31
Release date:2010-10-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Exploring the Trypanosoma brucei Hsp83 potential as a target for structure guided drug design.
PLoS Negl Trop Dis, 7, 2013
3PVG
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BU of 3pvg by Molmil
Crystal structure of Z. mays CK2 alpha subunit in complex with the inhibitor 4,5,6,7-tetrabromo-1-carboxymethylbenzimidazole (K68)
Descriptor: (4,5,6,7-tetrabromo-1H-benzimidazol-1-yl)acetic acid, Casein kinase II subunit alpha
Authors:Papinutto, E, Franchin, C, Battistutta, R.
Deposit date:2010-12-07
Release date:2010-12-15
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:ATP site-directed inhibitors of protein kinase CK2: an update.
Curr Top Med Chem, 11, 2011
2AEU
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BU of 2aeu by Molmil
MJ0158, apo form
Descriptor: Hypothetical protein MJ0158, SULFATE ION
Authors:Kaiser, J.T, Gromadski, K, Rother, M, Engelhardt, H, Rodnina, M.V, Wahl, M.C.
Deposit date:2005-07-24
Release date:2005-10-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and functional investigation of a putative archaeal selenocysteine synthase
Biochemistry, 44, 2005
2QNY
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BU of 2qny by Molmil
Crystal structure of the complex between the A246F mutant of mycobacterium beta-ketoacyl-acyl carrier protein synthase III (FABH) and SS-(2-hydroxyethyl) O-decyl ester carbono(dithioperoxoic) acid
Descriptor: 3-oxoacyl-[acyl-carrier-protein] synthase 3, BETA-MERCAPTOETHANOL, DECYL FORMATE
Authors:Sachdeva, S, Musayev, F, Alhamadsheh, M, Scarsdale, J.N, Wright, H.T, Reynolds, K.A.
Deposit date:2007-07-19
Release date:2008-05-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Separate Entrance and Exit Portals for Ligand Traffic in Mycobacterium tuberculosis FabH
Chem.Biol., 15, 2008
3QHC
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BU of 3qhc by Molmil
Crystal structure of Symerythrin from Cyanophora paradoxa, reduced with dithionite
Descriptor: FE (III) ION, Symerythrin
Authors:Cooley, R.B, Arp, D.J, Karplus, P.A.
Deposit date:2011-01-25
Release date:2011-08-31
Last modified:2011-10-12
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Symerythrin structures at atomic resolution and the origins of rubrerythrins and the ferritin-like superfamily.
J.Mol.Biol., 413, 2011
1Y5C
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BU of 1y5c by Molmil
The structure of a lactoferricinB derivative bound to micelles (LfcinB4-14)
Descriptor: Lactotransferrin
Authors:Nguyen, L.T, Schibli, D.J, Vogel, H.J.
Deposit date:2004-12-02
Release date:2005-03-22
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural studies and model membrane interactions of two peptides derived from bovine lactoferricin
J.Pept.Sci., 11, 2005
2OM2
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BU of 2om2 by Molmil
Crystal Structure Of Human G[alpha]i1 Bound To The Goloco Motif Of Rgs14
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Guanine nucleotide-binding protein G(i), alpha-1 subunit, ...
Authors:Siderovski, D.P, Kimple, R.J.
Deposit date:2007-01-20
Release date:2007-07-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure-based Protocol for Identifying Mutations that Enhance Protein-Protein Binding Affinities.
J.Mol.Biol., 371, 2007

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