Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6SB7
DownloadVisualize
BU of 6sb7 by Molmil
Human Carbonic Anhydrase II in complex with fragment.
Descriptor: (4-CARBOXYPHENYL)(CHLORO)MERCURY, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5-chloranylthiophene-2-sulfonamide, ...
Authors:Gloeckner, S, Heine, A, Klebe, G.
Deposit date:2019-07-19
Release date:2020-04-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.09 Å)
Cite:A Proof-of-Concept Fragment Screening of a Hit-Validated 96-Compounds Library against Human Carbonic Anhydrase II.
Biomolecules, 10, 2020
6AWQ
DownloadVisualize
BU of 6awq by Molmil
Anomalous chloride signal reveals the position of sertraline complexed with the serotonin transporter at the central site
Descriptor: (1S,4S)-4-(3,4-dichlorophenyl)-N-methyl-1,2,3,4-tetrahydronaphthalen-1-amine, 2-acetamido-2-deoxy-beta-D-glucopyranose, 8B6 antibody FAB heavy chain, ...
Authors:Coleman, J.A, Gouaux, E.
Deposit date:2017-09-06
Release date:2017-10-25
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (4.046 Å)
Cite:Structural basis for recognition of diverse antidepressants by the human serotonin transporter.
Nat. Struct. Mol. Biol., 25, 2018
6SIJ
DownloadVisualize
BU of 6sij by Molmil
SAD structure of Hen Egg White Lysozyme recovered by continuous rotation data collection and multivariate analysis of Friedel pairs
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ...
Authors:Garcia-Bonete, M.J, Katona, G.
Deposit date:2019-08-10
Release date:2019-11-06
Last modified:2019-11-13
Method:X-RAY DIFFRACTION (1.61018026 Å)
Cite:Bayesian machine learning improves single-wavelength anomalous diffraction phasing.
Acta Crystallogr.,Sect.A, 75, 2019
4L1F
DownloadVisualize
BU of 4l1f by Molmil
Electron transferring flavoprotein of Acidaminococcus fermentans: Towards a mechanism of flavin-based electron bifurcation
Descriptor: 1,3-PROPANDIOL, Acyl-CoA dehydrogenase domain protein, COENZYME A PERSULFIDE, ...
Authors:Mowafy, A.M, Chowdhury, N.P, Demmer, J, Upadhyay, V, Kolzer, S, Jayamani, E, Kahnt, J, Demmer, U, Ermler, U, Buckel, W.
Deposit date:2013-06-03
Release date:2014-01-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Studies on the Mechanism of Electron Bifurcation Catalyzed by Electron Transferring Flavoprotein (Etf) and Butyryl-CoA Dehydrogenase (Bcd) of Acidaminococcus fermentans.
J.Biol.Chem., 289, 2014
7ZZP
DownloadVisualize
BU of 7zzp by Molmil
Structure of HDAC2 complexed with an inhibitory ligand
Descriptor: (2S)-2-HYDROXYPROPANOIC ACID, 1,2-ETHANEDIOL, 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, ...
Authors:Cleasby, A, Tisi, D.
Deposit date:2022-05-25
Release date:2022-09-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Fragment-Based Discovery of a Novel, Brain Penetrant, Orally Active HDAC2 Inhibitor.
Acs Med.Chem.Lett., 13, 2022
5Y4A
DownloadVisualize
BU of 5y4a by Molmil
Cadmium directed assembly of adenine phosphoribosyltransferase from Yersinia pseudotuberculosis.
Descriptor: Adenine phosphoribosyltransferase, CADMIUM ION, SODIUM ION, ...
Authors:Pavithra, G.C, Ramagopal, U.A.
Deposit date:2017-08-02
Release date:2018-08-08
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Cadmium directed assembly of adenine phosphoribosyltransferase from Yersinia pseudotuberculosis.
To be published
6APE
DownloadVisualize
BU of 6ape by Molmil
Crystal Structure of Bifunctional protein FolD from Helicobacter pylori
Descriptor: Bifunctional protein FolD, GLYCEROL, SODIUM ION
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2017-08-17
Release date:2017-09-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal Structure of Bifunctional protein FolD from Helicobacter pylori
to be published
6SBM
DownloadVisualize
BU of 6sbm by Molmil
Human Carbonic Anhydrase II in complex with 4-(pentyloxy)benzenesulfonamide
Descriptor: (4-CARBOXYPHENYL)(CHLORO)MERCURY, 4-pentoxybenzenesulfonamide, CITRATE ANION, ...
Authors:Gloeckner, S, Ngo, K, Heine, A, Klebe, G.
Deposit date:2019-07-21
Release date:2020-08-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Human Carbonic Anhydrase II in complex with 4-(pentyloxy)benzenesulfonamide
To Be Published
6SJN
DownloadVisualize
BU of 6sjn by Molmil
Methyltransferase MtgA from Desulfitobacterium hafniense in complex with methyl-tetrahydrofolate (P212121)
Descriptor: GLYCEROL, N-[4-({[(6S)-2-AMINO-4-HYDROXY-5-METHYL-5,6,7,8-TETRAHYDROPTERIDIN-6-YL]METHYL}AMINO)BENZOYL]-L-GLUTAMIC ACID, SODIUM ION, ...
Authors:Badmann, T, Groll, M.
Deposit date:2019-08-13
Release date:2019-09-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structures in Tetrahydrofolate Methylation in Desulfitobacterial Glycine Betaine Metabolism at Atomic Resolution.
Chembiochem, 21, 2020
5VNR
DownloadVisualize
BU of 5vnr by Molmil
X-ray structure of perdeuterated T4 lysozyme cysteine-free pseudo-wild type at cryogenic temperature
Descriptor: 2-HYDROXYETHYL DISULFIDE, CHLORIDE ION, Endolysin, ...
Authors:Li, L, Shukla, S, Meilleur, F, Standaert, R.F, Pierce, J, Myles, D.A.A, Cuneo, M.J.
Deposit date:2017-05-01
Release date:2017-07-26
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.631 Å)
Cite:Neutron crystallographic studies of T4 lysozyme at cryogenic temperature.
Protein Sci., 26, 2017
5VOP
DownloadVisualize
BU of 5vop by Molmil
Methionine synthase folate-binding domain from Thermus thermophilus HB8 native
Descriptor: 5-METHYL-5,6,7,8-TETRAHYDROFOLIC ACID, 5-methyltetrahydrofolate homocysteine S-methyltransferase, CITRATE ANION, ...
Authors:Koutmos, M, Yamada, K.
Deposit date:2017-05-03
Release date:2018-01-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The folate-binding module of Thermus thermophilus cobalamin-dependent methionine synthase displays a distinct variation of the classical TIM barrel: a TIM barrel with a `twist'.
Acta Crystallogr D Struct Biol, 74, 2018
6SFU
DownloadVisualize
BU of 6sfu by Molmil
Human Carbonic Anhydrase II in complex with a furan-containing benzenesulfonamide
Descriptor: (4-CARBOXYPHENYL)(CHLORO)MERCURY, 4-(furan-2-ylmethylamino)benzenesulfonamide, Carbonic anhydrase 2, ...
Authors:Gloeckner, S, Heine, A, Klebe, G.
Deposit date:2019-08-02
Release date:2020-08-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:Human Carbonic Anhydrase II in complex with a furan-containing benzenesulfonamide
To Be Published
7ZYI
DownloadVisualize
BU of 7zyi by Molmil
Structure of the human sodium/bile acid cotransporter (NTCP) in complex with Fab and nanobody
Descriptor: CHOLESTEROL, GLYCOCHENODEOXYCHOLIC ACID, Nanobody, ...
Authors:Liu, H, Irobalieva, R.N, Bang-Sorensen, R, Nosol, K, Mukherjee, S, Agrawal, P, Stieger, B, Kossiakoff, A.A, Locher, K.P.
Deposit date:2022-05-24
Release date:2022-07-13
Last modified:2022-08-10
Method:ELECTRON MICROSCOPY (2.88 Å)
Cite:Structure of human NTCP reveals the basis of recognition and sodium-driven transport of bile salts into the liver.
Cell Res., 32, 2022
6AWX
DownloadVisualize
BU of 6awx by Molmil
Structure of PR-10 Allergen Ara h 8.01.
Descriptor: Ara h 8 allergen, SODIUM ION
Authors:Offermann, L.R, Yarbrough, J, McBride, J, Hurlburt, B.K, Maleki, S.J, Pote, S.S, Chruszcz, M.
Deposit date:2017-09-06
Release date:2018-09-12
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of PR-10 Allergen Ara h 8.01.
To Be Published
6SIK
DownloadVisualize
BU of 6sik by Molmil
SAD structure of Hen Egg White Lysozyme recovered by continuous rotation data collection and univariate analysis
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ...
Authors:Garcia-Bonete, M.J, Katona, G.
Deposit date:2019-08-10
Release date:2019-11-06
Last modified:2019-11-13
Method:X-RAY DIFFRACTION (1.61007011 Å)
Cite:Bayesian machine learning improves single-wavelength anomalous diffraction phasing.
Acta Crystallogr.,Sect.A, 75, 2019
6SIL
DownloadVisualize
BU of 6sil by Molmil
SAD structure of Hen Egg White Lysozyme recovered by inverse beam geometry data collection and multivariate analysis of Friedel pairs
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ...
Authors:Garcia-Bonete, M.J, Katona, G.
Deposit date:2019-08-10
Release date:2019-11-06
Last modified:2019-11-13
Method:X-RAY DIFFRACTION (1.61018026 Å)
Cite:Bayesian machine learning improves single-wavelength anomalous diffraction phasing.
Acta Crystallogr.,Sect.A, 75, 2019
6SBC
DownloadVisualize
BU of 6sbc by Molmil
Structure of type II terpene cyclase MstE from Scytonema in complex with farnesyl dihydroxybenzoate
Descriptor: CHLORIDE ION, MstE, SODIUM ION, ...
Authors:Moosmann, P, Ecker, F, Leopold-Messer, S, Cahn, J.K.B, Groll, M, Piel, J.
Deposit date:2019-07-19
Release date:2020-07-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:A monodomain class II terpene cyclase assembles complex isoprenoid scaffolds.
Nat.Chem., 12, 2020
5FQ9
DownloadVisualize
BU of 5fq9 by Molmil
Crystal structure of the OXA10 with 1C
Descriptor: (3R)-3-(cyclohexylcarbonylamino)-2-oxidanyl-3,4-dihydro-1,2-benzoxaborinine-8-carboxylic acid, ACETATE ION, BETA-LACTAMASE OXA-10, ...
Authors:Brem, J, McDonough, M.A, Cain, R, Clifton, I, Fishwick, C.W.G, Schofield, C.J.
Deposit date:2015-12-08
Release date:2016-08-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural basis of metallo-beta-lactamase, serine-beta-lactamase and penicillin-binding protein inhibition by cyclic boronates.
Nat Commun, 7, 2016
6SBL
DownloadVisualize
BU of 6sbl by Molmil
Human Carbonic Anhydrase II in complex with 4-hexylbenzenesulfonamide
Descriptor: (4-CARBOXYPHENYL)(CHLORO)MERCURY, 4-hexylbenzenesulfonamide, CITRATE ANION, ...
Authors:Gloeckner, S, Ngo, K, Heine, A, Klebe, G.
Deposit date:2019-07-21
Release date:2020-08-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (0.94 Å)
Cite:Human Carbonic Anhydrase II in complex with 4-hexylbenzenesulfonamide
To Be Published
7ZJW
DownloadVisualize
BU of 7zjw by Molmil
Rabbit 80S ribosome as it decodes the Sec-UGA codon
Descriptor: 18S rRNA, 28S rRNA, 40S Ribosomal protein eS19, ...
Authors:Hilal, T, Simonovic, M, Spahn, C.M.T.
Deposit date:2022-04-12
Release date:2022-10-19
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structure of the mammalian ribosome as it decodes the selenocysteine UGA codon.
Science, 376, 2022
6SBQ
DownloadVisualize
BU of 6sbq by Molmil
The crystal structure of PfA-M1 in complex with 7-amino-4-phenyl-5,7,8,9-tetrahydrobenzocyclohepten-6-one
Descriptor: DI(HYDROXYETHYL)ETHER, M1-family alanyl aminopeptidase, MALONATE ION, ...
Authors:Salomon, E, Schmitt, M, Mouray, E, McEwen, A.G, Torchy, M, Poussin-Courmontagne, P, Alavi, S, Tarnus, C, Cavarelli, J, Florent, I, Albrecht, S.
Deposit date:2019-07-22
Release date:2020-03-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Aminobenzosuberone derivatives as PfA-M1 inhibitors: Molecular recognition and antiplasmodial evaluation.
Bioorg.Chem., 98, 2020
6SAC
DownloadVisualize
BU of 6sac by Molmil
N-terminal expression tag remainder of human Carbonic Anhydrase II covalently modified by fragment
Descriptor: (4-CARBOXYPHENYL)(CHLORO)MERCURY, 1-(1,3-dimethyl-1H-pyrazol-5-yl)methanamine, Carbonic anhydrase 2, ...
Authors:Gloeckner, S, Heine, A, Klebe, G.
Deposit date:2019-07-16
Release date:2020-04-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:A Proof-of-Concept Fragment Screening of a Hit-Validated 96-Compounds Library against Human Carbonic Anhydrase II.
Biomolecules, 10, 2020
6B09
DownloadVisualize
BU of 6b09 by Molmil
Crystal structure of HsNUDT16 in complex with diADPR (soaked)
Descriptor: CHLORIDE ION, MAGNESIUM ION, SODIUM ION, ...
Authors:Thirawatananond, P, Gabelli, S.B.
Deposit date:2017-09-14
Release date:2019-01-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural analyses of NudT16-ADP-ribose complexes direct rational design of mutants with improved processing of poly(ADP-ribosyl)ated proteins.
Sci Rep, 9, 2019
5FNK
DownloadVisualize
BU of 5fnk by Molmil
Native state mass spectrometry, surface plasmon resonance and X-ray crystallography correlate strongly as a fragment screening combination
Descriptor: (~{E})-3-(2,4-dichlorophenyl)prop-2-enoic acid, ACETIC ACID, CARBONIC ANHYDRASE 2, ...
Authors:Woods, L.A, Dolezal, O, Ren, B, Ryan, J.H, Peat, T.S, Poulsen, S.A.
Deposit date:2015-11-15
Release date:2016-03-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Native State Mass Spectrometry, Surface Plasmon Resonance and X-Ray Crystallography Correlate Strongly as a Fragment Screening Combination.
J.Med.Chem., 59, 2016
6SYC
DownloadVisualize
BU of 6syc by Molmil
Crystal structure of the lysozyme in presence of bromophenol blue at pH 6.5
Descriptor: CHLORIDE ION, IMIDAZOLE, Lysozyme, ...
Authors:Camara-Artigas, A, Plaza-Garrido, M, Salinas-Garcia, M.C.
Deposit date:2019-09-27
Release date:2020-09-09
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Lysozyme crystals dyed with bromophenol blue: where has the dye gone?
Acta Crystallogr D Struct Biol, 76, 2020

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon