PDB: 9760 resultsInfo pagesStatus searchChemie searchBIRD

---

7SBW	Structure of OC43 spike in complex with polyclonal Fab5 (Donor 1051) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Human polyclonal Fab model with polyalanine backbone - Heavy chain, ... Authors: Bangaru, S, Antanasijevic, A, Ward, A. Deposit date: 2021-09-26 Release date: 2022-05-04 Last modified: 2022-05-18 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Structural mapping of antibody landscapes to human betacoronavirus spike proteins. Sci Adv, 8, 2022
7N28	Cryo-EM structure of broadly neutralizing V2-apex-targeting antibody J033 in complex with HIV-1 Env Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3BNC117 antibody heavy chain, ... Authors: Zhou, T, Gao, F. Deposit date: 2021-05-28 Release date: 2022-04-06 Last modified: 2022-06-22 Method: ELECTRON MICROSCOPY (4.2 Å) Cite: Development of Neutralization Breadth against Diverse HIV-1 by Increasing Ab-Ag Interface on V2. Adv Sci, 9, 2022
7MXD	Cryo-EM structure of broadly neutralizing V2-apex-targeting antibody J038 in complex with HIV-1 Env Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3BNC117 antibody heavy chain, ... Authors: Zhou, T, Gao, F. Deposit date: 2021-05-19 Release date: 2022-03-30 Last modified: 2022-06-22 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Development of Neutralization Breadth against Diverse HIV-1 by Increasing Ab-Ag Interface on V2. Adv Sci, 9, 2022
7BSC	Complex structure of 1G5.3 Fab bound to DENV2 NS1c Descriptor: 1G5.3 Fab Heavy Chain, 1G5.3 Fab Light Chain, Non-structural protein 1 Authors: Song, H, Qi, J, Gao, F.G. Deposit date: 2020-03-30 Release date: 2020-12-23 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.31 Å) Cite: A broadly protective antibody that targets the flavivirus NS1 protein. Science, 371, 2021
8CZ5	N11 P domain 2D9 Fab P complex Descriptor: ACETATE ION, CADMIUM ION, Fab 2D9 Heavy Chain, ... Authors: Leuthold, M, Kilic, T, Hansman, G. Deposit date: 2022-05-24 Release date: 2022-10-19 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.645 Å) Cite: Structural Basis for Rabbit Hemorrhagic Disease Virus Antibody Specificity. J.Virol., 96, 2022
7DF1	Crystal structure of human CD98 heavy chain extracellular domain in complex with S1-F4 scFv Descriptor: 4F2 cell-surface antigen heavy chain, IGL c2062_light_IGKV4-1_IGKJ5, S1-F4 VH Authors: Liu, X, Ding, J, Sui, J, Tian, X. Deposit date: 2020-11-06 Release date: 2022-12-07 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.806 Å) Cite: An anti-CD98 antibody displaying pH-dependent Fc-mediated tumour-specific activity against multiple cancers in CD98-humanized mice. Nat Biomed Eng, 2022
7BSD	Complex structure of 1G5.3 Fab bound to ZIKV NS1c Descriptor: 1G5.3 Fab Heavy Chain, 1G5.3 Fab Light Chain, NS1C Authors: Song, H, Qi, J, Gao, F.G. Deposit date: 2020-03-30 Release date: 2020-12-23 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.53 Å) Cite: A broadly protective antibody that targets the flavivirus NS1 protein. Science, 371, 2021
8CYL	Ast89 P domain Descriptor: Capsid protein VP60 Authors: Leuthold, M, Kilic, T, Hansman, G. Deposit date: 2022-05-23 Release date: 2022-10-19 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.888 Å) Cite: Structural Basis for Rabbit Hemorrhagic Disease Virus Antibody Specificity. J.Virol., 96, 2022
7TQA	Crystal Structure of monoclonal S9.6 Fab Descriptor: Fab S9.6 heavy chain, Fab S9.6 light chain, GLYCEROL, ... Authors: Bou-Nader, C, Zhang, J. Deposit date: 2022-01-26 Release date: 2022-03-30 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2.328 Å) Cite: Structural basis of R-loop recognition by the S9.6 monoclonal antibody. Nat Commun, 13, 2022
7TQB	Crystal structure of monoclonal S9.6 Fab bound to DNA-RNA hybrid Descriptor: DNA, FAB S9.6 Heavy Chain, FAB S9.6 Light Chain, ... Authors: Bou-Nader, C, Zhang, J. Deposit date: 2022-01-26 Release date: 2022-03-30 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Structural basis of R-loop recognition by the S9.6 monoclonal antibody. Nat Commun, 13, 2022
6AL5	COMPLEX BETWEEN CD19 (N138Q MUTANT) AND B43 FAB Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, B-lymphocyte antigen CD19, B43 HEAVY CHAIN, ... Authors: Teplyakov, A, Obmolova, G, Gilliland, G.L. Deposit date: 2017-08-07 Release date: 2018-03-28 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (3 Å) Cite: Crystal structure of B-cell co-receptor CD19 in complex with antibody B43 reveals an unexpected fold. Proteins, 86, 2018
7RR0	SARS-CoV-2 receptor binding domain bound to Fab PDI 222 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, PDI 222 Fab Heavy Chain, PDI 222 Fab Light Chain, ... Authors: Pymm, P, Glukhova, A, Black, K.A, Tham, W.H. Deposit date: 2021-08-08 Release date: 2021-10-06 Last modified: 2021-10-27 Method: ELECTRON MICROSCOPY (3.12 Å) Cite: Landscape of human antibody recognition of the SARS-CoV-2 receptor binding domain. Cell Rep, 37, 2021
7YP1	Cryo-EM structure of EBV gHgL-gp42 in complex with mAb 10E4 (localized refinement) Descriptor: 10E4 heavy chain, 10E4 light chain, EBV gH, ... Authors: Liu, L, Sun, H, Jiang, Y, Hong, J, Zheng, Q, Li, S, Chen, Y, Xia, N. Deposit date: 2022-08-02 Release date: 2024-01-31 Method: ELECTRON MICROSCOPY (3.54 Å) Cite: Non-overlapping epitopes on the gHgL-gp42 complex for the rational design of a triple-antibody cocktail against EBV infection. Cell Rep Med, 4, 2023
7YOY	Cryo-EM structure of EBV gHgL-gp42 in complex with mAbs 3E8 and 5E3 (localized refinement) Descriptor: 3E8 heavy chain, 3E8 light chain, 5E3 heavy chain, ... Authors: Liu, L, Sun, H, Jiang, Y, Hong, J, Zheng, Q, Li, S, Chen, Y, Xia, N. Deposit date: 2022-08-02 Release date: 2024-01-31 Method: ELECTRON MICROSCOPY (3.64 Å) Cite: Non-overlapping epitopes on the gHgL-gp42 complex for the rational design of a triple-antibody cocktail against EBV infection. Cell Rep Med, 4, 2023
7YP2	Cryo-EM structure of EBV gHgL-gp42 in complex with mAb 6H2 (localized refinement) Descriptor: 6H2 heavy chain, 6H2 light chain, Envelope glycoprotein H Authors: Liu, L, Sun, H, Jiang, Y, Hong, J, Zheng, Q, Li, S, Chen, Y, Xia, N. Deposit date: 2022-08-02 Release date: 2024-01-31 Method: ELECTRON MICROSCOPY (3.52 Å) Cite: Non-overlapping epitopes on the gHgL-gp42 complex for the rational design of a triple-antibody cocktail against EBV infection. Cell Rep Med, 4, 2023
5VPH	CRYSTAL STRUCTURE OF DER P 1 COMPLEXED WITH FAB 4C1 Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Der p 1 allergen, ... Authors: Chruszcz, M, Vailes, L.D, Chapman, M.D, Pomes, A, Minor, W. Deposit date: 2017-05-05 Release date: 2017-05-24 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Molecular Determinants For Antibody Binding On Group 1 House Dust Mite Allergens. J.Biol.Chem., 287, 2012
5VPG	CRYSTAL STRUCTURE OF DER P 1 COMPLEXED WITH FAB 4C1 Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... Authors: Chruszcz, M, Vailes, L.D, Chapman, M.D, Pomes, A, Minor, W. Deposit date: 2017-05-05 Release date: 2017-05-24 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Molecular Determinants For Antibody Binding On Group 1 House Dust Mite Allergens. J.Biol.Chem., 287, 2012
8D47	fp.006 Fab in complex with SARS-CoV-2 Fusion Peptide Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, PHOSPHATE ION, ... Authors: Abernathy, M.E, Barnes, C.O. Deposit date: 2022-06-01 Release date: 2022-12-21 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2 Å) Cite: Human neutralizing antibodies to cold linear epitopes and subdomain 1 of the SARS-CoV-2 spike glycoprotein. Sci Immunol, 8, 2023
8D48	sd1.040 Fab in complex with SARS-CoV-2 Spike 2P glycoprotein Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, sd1.040 Fab heavy chain, ... Authors: Abernathy, M.E, Barnes, C.O. Deposit date: 2022-06-01 Release date: 2023-01-25 Last modified: 2023-03-22 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: Human neutralizing antibodies to cold linear epitopes and subdomain 1 of the SARS-CoV-2 spike glycoprotein. Sci Immunol, 8, 2023
7COE	Crystal structure of Receptor binding domain of MERS-CoV and KNIH90-F1 Fab complex Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain, ... Authors: Lee, J.Y, Song, J.Y, Lee, H.S, Hong, E, Jang, T.H. Deposit date: 2020-08-04 Release date: 2021-08-04 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.05 Å) Cite: The structure of a novel antibody against the spike protein inhibits Middle East respiratory syndrome coronavirus infections. Sci Rep, 12, 2022
6AJ9	The structure of Enterovirus D68 mature virion in complex with Fab 15C5 and 11G1 Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ... Authors: Zheng, Q.B, Zhu, R, Xu, L.F, He, M.Z, Yan, X.D, Cheng, T, Li, S.W. Deposit date: 2018-08-27 Release date: 2018-11-07 Last modified: 2022-03-23 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: Atomic structures of enterovirus D68 in complex with two monoclonal antibodies define distinct mechanisms of viral neutralization Nat Microbiol, 4, 2019
6AJ7	The structure of Enterovirus D68 mature virion in complex with Fab 15C5 Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ... Authors: Zheng, Q.B, Zhu, R, Xu, L.F, He, M.Z, Yan, X.D, Cheng, T, Li, S.W. Deposit date: 2018-08-27 Release date: 2018-11-07 Last modified: 2022-03-23 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Atomic structures of enterovirus D68 in complex with two monoclonal antibodies define distinct mechanisms of viral neutralization Nat Microbiol, 4, 2019
7LKI	The crystal structure of Epitope III of HCV envelop protein E2 in complex with antibody 1H8 Descriptor: Epitope III peptide GLY-ALA-PRO-THR-TYR-SER-TRP-GLY, antibody 1H8 heavy chain, antibody 1H8 light chain Authors: Deng, L, Zhang, P. Deposit date: 2021-02-02 Release date: 2021-08-04 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2 Å) Cite: A conserved epitope III on hepatitis C virus E2 protein has alternate conformations facilitating cell binding or virus neutralization. Proc.Natl.Acad.Sci.USA, 118, 2021
4LU5	Structure of murine IgG2a A20G2-Fab in complex with vaccinia antigen A33R at the resolution of 2.9 Angstroms Descriptor: A33R, Murine IgG2a A20G2 Heavy chain Fab domain, Murine IgG2a A20G2 Light chain Fab domain Authors: Matho, M.H, Schlossman, A.M, Zajonc, D.M. Deposit date: 2013-07-24 Release date: 2014-07-30 Last modified: 2015-09-23 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Structural and Functional Characterization of Anti-A33 Antibodies Reveal a Potent Cross-Species Orthopoxviruses Neutralizer. Plos Pathog., 11, 2015
6F7T	Crystal Structure of an Fab fragment in complex with a peptide from Bacillus subtilis RNase Y Descriptor: FAB RY79-90, HEAVY CHAIN, LIGHT CHAIN, ... Authors: Golinelli-Pimpaneau, B, Hardouin, P. Deposit date: 2017-12-11 Release date: 2018-10-31 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Dissociation of the Dimer of the Intrinsically Disordered Domain of RNase Y upon Antibody Binding. Biophys. J., 115, 2018

<130131132133134135136137138139140141142143144145>