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8DH5
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BU of 8dh5 by Molmil
T7 RNA polymerase elongation complex with unnatural base dPa-ATP mismatch
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Non-template strand DNA, ...
Authors:Oh, J, Wang, D.
Deposit date:2022-06-24
Release date:2023-02-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structural basis of transcription recognition of a hydrophobic unnatural base pair by T7 RNA polymerase.
Nat Commun, 14, 2023
8DH2
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BU of 8dh2 by Molmil
T7 RNA polymerase elongation complex with unnatural base dDs-ATP mismatch
Descriptor: GLYCEROL, MAGNESIUM ION, Non-template strand DNA, ...
Authors:Oh, J, Wang, D.
Deposit date:2022-06-24
Release date:2023-02-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis of transcription recognition of a hydrophobic unnatural base pair by T7 RNA polymerase.
Nat Commun, 14, 2023
8DJG
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BU of 8djg by Molmil
ADGRL3-lectin domain in complex with an activating synthetic antibody fragment
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, Isoform 2 of Adhesion G protein-coupled receptor L3, ...
Authors:Kordon, S.P, Bandekar, S.J, Arac, D.
Deposit date:2022-06-30
Release date:2023-02-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Isoform- and ligand-specific modulation of the adhesion GPCR ADGRL3/Latrophilin3 by a synthetic binder.
Nat Commun, 14, 2023
8CVN
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BU of 8cvn by Molmil
Cryo-EM Structure of Human 15-PGDH in Complex with Small Molecule SW209415
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 15-hydroxyprostaglandin dehydrogenase [NAD(+)], 2-[butyl(oxidanyl)-$l^{3}-sulfanyl]-4-(2,3-dimethylimidazol-4-yl)-6-(1,3-thiazol-2-yl)thieno[2,3-b]pyridin-3-amine
Authors:Huang, W, Taylor, D.J.
Deposit date:2022-05-18
Release date:2023-03-01
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Small molecule inhibitors of 15-PGDH exploit a physiologic induced-fit closing system.
Nat Commun, 14, 2023
8DG8
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BU of 8dg8 by Molmil
Cryo-EM Structure of HPIV3 prefusion F trimer in complex with 3x1 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3x1 monoclonal antibody, VH region, ...
Authors:Rodarte, J.V, Pancera, M.
Deposit date:2022-06-23
Release date:2023-02-22
Method:ELECTRON MICROSCOPY (3.62 Å)
Cite:Cross-protective antibodies against common endemic respiratory viruses.
Nat Commun, 14, 2023
8DG9
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BU of 8dg9 by Molmil
Cryo-EM Structure of RSV prefusion F trimer in complex with three MxR Fabs
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fusion glycoprotein F0, mAb MxR Heavy Chain, ...
Authors:Rodarte, J.V, Pancera, M.
Deposit date:2022-06-23
Release date:2023-02-22
Method:ELECTRON MICROSCOPY (2.24 Å)
Cite:Cross-protective antibodies against common endemic respiratory viruses.
Nat Commun, 14, 2023
8CZJ
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BU of 8czj by Molmil
A bacteria Zrt/Irt-like protein in the apo state
Descriptor: Putative membrane protein, SULFATE ION, [(Z)-octadec-9-enyl] (2R)-2,3-bis(oxidanyl)propanoate
Authors:Zhang, Y, Hu, J.
Deposit date:2022-05-24
Release date:2023-02-22
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.751 Å)
Cite:Structural insights into the elevator-type transport mechanism of a bacterial ZIP metal transporter.
Nat Commun, 14, 2023
2I4M
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BU of 2i4m by Molmil
Rhodopseudomonas palustris prolyl-tRNA synthetase in complex with ProAMS
Descriptor: '5'-O-(N-(L-PROLYL)-SULFAMOYL)ADENOSINE, Proline-tRNA ligase
Authors:Crepin, T, Yaremchuk, A, Tukalo, M, Cusack, S.
Deposit date:2006-08-22
Release date:2006-10-24
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structures of Two Bacterial Prolyl-tRNA Synthetases with and without a cis-Editing Domain.
Structure, 14, 2006
8DBX
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BU of 8dbx by Molmil
CryoEM structure of partially oxidized MoFe-protein on ultrathin carbon
Descriptor: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, FE (III) ION, FE(8)-S(7) CLUSTER, ...
Authors:Warmack, R.A, Rees, D.C.
Deposit date:2022-06-14
Release date:2023-03-08
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (1.92 Å)
Cite:Structural consequences of turnover-induced homocitrate loss in nitrogenase.
Nat Commun, 14, 2023
8CWL
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BU of 8cwl by Molmil
Cryo-EM structure of Human 15-PGDH in complex with small molecule SW222746
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 15-hydroxyprostaglandin dehydrogenase [NAD(+)], 2-methyl-6-[7-(piperidine-1-carbonyl)quinoxalin-2-yl]isoquinolin-1(2H)-one
Authors:Huang, W, Taylor, D.J.
Deposit date:2022-05-19
Release date:2023-03-08
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Small molecule inhibitors of 15-PGDH exploit a physiologic induced-fit closing system.
Nat Commun, 14, 2023
8CXJ
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BU of 8cxj by Molmil
The IgI3 domain of R28 protein from S. pyogenes bound to CEACAM1
Descriptor: CHLORIDE ION, Carcinoembryonic antigen-related cell adhesion molecule 1, GLYCEROL, ...
Authors:Bonsor, D.A, McCarthy, A.J.
Deposit date:2022-05-21
Release date:2023-03-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Human CEACAM1 is targeted by a Streptococcus pyogenes adhesin implicated in puerperal sepsis pathogenesis.
Nat Commun, 14, 2023
8DFT
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BU of 8dft by Molmil
Cryo-EM structure of conjugative pili from Pyrobaculum calidifontis
Descriptor: Pilin protein, [(2~{S},7~{S},11~{S},15~{S},19~{R},22~{R},26~{S},30~{R},34~{R},38~{S},43~{S},47~{S},51~{S},55~{R},58~{R},62~{S},66~{R},70~{R})-38-(hydroxymethyl)-7,11,15,19,22,26,30,34,43,47,51,55,58,62,66,70-hexadecamethyl-1,4,37,40-tetraoxacyclodoheptacont-2-yl]methanol
Authors:Beltran, L.C, Egelman, E.H.
Deposit date:2022-06-22
Release date:2023-03-22
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Archaeal DNA-import apparatus is homologous to bacterial conjugation machinery.
Nat Commun, 14, 2023
8DHA
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BU of 8dha by Molmil
Leptin-bound leptin receptor complex- focused interaction
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Leptin, Leptin receptor
Authors:Saxton, R.A, Caveney, N.A, Garcia, K.C.
Deposit date:2022-06-25
Release date:2023-04-19
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural insights into the mechanism of leptin receptor activation.
Nat Commun, 14, 2023
8DH8
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BU of 8dh8 by Molmil
Leptin-bound leptin receptor complex-full ECD
Descriptor: Leptin, Leptin receptor
Authors:Saxton, R.A, Caveney, N.A, Garcia, K.C.
Deposit date:2022-06-25
Release date:2023-04-19
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (5.9 Å)
Cite:Structural insights into the mechanism of leptin receptor activation.
Nat Commun, 14, 2023
8DH9
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BU of 8dh9 by Molmil
Leptin-bound leptin receptor complex-D3-D7
Descriptor: Leptin, Leptin receptor
Authors:Saxton, R.A, Caveney, N.A, Garcia, K.C.
Deposit date:2022-06-25
Release date:2023-04-19
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structural insights into the mechanism of leptin receptor activation.
Nat Commun, 14, 2023
8DEH
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BU of 8deh by Molmil
Ankyrin domain of SKD3
Descriptor: Caseinolytic peptidase B protein homolog
Authors:Lee, S, Tsai, F.T.F.
Deposit date:2022-06-20
Release date:2023-04-19
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.815 Å)
Cite:Structural basis of impaired disaggregase function in the oxidation-sensitive SKD3 mutant causing 3-methylglutaconic aciduria.
Nat Commun, 14, 2023
2FYV
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BU of 2fyv by Molmil
Golgi alpha-mannosidase II complex with an amino-salacinol carboxylate analog
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 6-DEOXY-6-[(2R,3R,4R)-3,4-DIHYDROXY-2-(HYDROXYMETHYL)PYRROLIDIN-1-YL]-L-GULONIC ACID, ...
Authors:Kuntz, D.A, Hamlet, T, Rose, D.R.
Deposit date:2006-02-08
Release date:2006-12-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Synthesis, enzymatic activity, and X-ray crystallography of an unusual class of amino acids.
Bioorg.Med.Chem., 14, 2006
8CZZ
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BU of 8czz by Molmil
Cryo-EM structure of T/F100 SOSIP.664 HIV-1 Env trimer with LMHS mutations in complex with Temsavir, 8ANC195, and 10-1074
Descriptor: 1-[4-(benzenecarbonyl)piperazin-1-yl]-2-[4-methoxy-7-(3-methyl-1H-1,2,4-triazol-1-yl)-1H-pyrrolo[2,3-c]pyridin-3-yl]ethane-1,2-dione, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Chen, Y, Pozharski, E, Tolbert, W, Pazgier, M.
Deposit date:2022-05-25
Release date:2023-05-31
Last modified:2023-11-08
Method:ELECTRON MICROSCOPY (3.14 Å)
Cite:Structure-function analyses reveal key molecular determinants of HIV-1 CRF01_AE resistance to the entry inhibitor temsavir.
Nat Commun, 14, 2023
8DIN
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BU of 8din by Molmil
The complex structure between human IgG1 Fc and its high affinity receptor FcgRI H174R variant
Descriptor: High affinity immunoglobulin gamma Fc receptor I, Ig gamma-1 Fc chain, MAGNESIUM ION, ...
Authors:Lu, J, Sun, P.D.
Deposit date:2022-06-29
Release date:2023-05-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Fc gamma RI FG-loop functions as a pH sensitive switch for IgG binding and release.
Front Immunol, 14, 2023
8CUD
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BU of 8cud by Molmil
Human excitatory amino acid transporter 3 (EAAT3) protomer in an outward facing apo state in 300 mM KCl
Descriptor: Excitatory amino acid transporter 3
Authors:Qiu, B, Boudker, O.
Deposit date:2022-05-17
Release date:2023-05-10
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.94 Å)
Cite:Symport and antiport mechanisms of human glutamate transporters.
Nat Commun, 14, 2023
8D2V
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BU of 8d2v by Molmil
Zebrafish MFSD2A isoform B in inward open ligand 1B conformation
Descriptor: DODECYL-BETA-D-MALTOSIDE, FAB heavy chain, FAB light chain, ...
Authors:Nguyen, C, Lei, H.T, Lai, L.T.F, Gallentino, M.J, Mu, X, Matthies, D, Gonen, T.
Deposit date:2022-05-30
Release date:2023-05-10
Last modified:2023-05-24
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Lipid flipping in the omega-3 fatty-acid transporter.
Nat Commun, 14, 2023
8DJ7
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BU of 8dj7 by Molmil
The complex structure between human IgG1 Fc and its high affinity receptor FcgRI H174R variant
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, High affinity immunoglobulin gamma Fc receptor I, Ig gamma-1 Fc chain, ...
Authors:Lu, J, Sun, P.D.
Deposit date:2022-06-30
Release date:2023-05-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Fc gamma RI FG-loop functions as a pH sensitive switch for IgG binding and release.
Front Immunol, 14, 2023
8D02
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BU of 8d02 by Molmil
Crystal Structure of Bacillus anthracis BxpB
Descriptor: BxpB, CALCIUM ION
Authors:Chattopadhyay, D, Turnbough, C.L.
Deposit date:2022-05-25
Release date:2023-05-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure and induced stability of trimeric BxpB: implications for the assembly of BxpB-BclA complexes in the exosporium of Bacillus anthracis.
Mbio, 14, 2023
8CUJ
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BU of 8cuj by Molmil
Human excitatory amino acid transporter 3 (EAAT3) protomer in an outward facing apo state in 150 mM NMDG-Cl
Descriptor: Excitatory amino acid transporter 3
Authors:Qiu, B, Boudker, O.
Deposit date:2022-05-17
Release date:2023-05-10
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.04 Å)
Cite:Symport and antiport mechanisms of human glutamate transporters.
Nat Commun, 14, 2023
8CV3
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BU of 8cv3 by Molmil
Human Excitatory excitatory amino acid transporter 3 (EAAT3) protomer at in an intermediate outward facing sodium-bound state
Descriptor: Excitatory amino acid transporter 3, SODIUM ION
Authors:Qiu, B, Boudker, O.
Deposit date:2022-05-17
Release date:2023-05-10
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.04 Å)
Cite:Symport and antiport mechanisms of human glutamate transporters.
Nat Commun, 14, 2023

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PDB entries from 2024-08-07

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