Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2MYO
DownloadVisualize
BU of 2myo by Molmil
SOLUTION STRUCTURE OF MYOTROPHIN, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: MYOTROPHIN
Authors:Yang, Y, Nanduri, S, Sen, S, Qin, J.
Deposit date:1998-08-17
Release date:1999-08-17
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The structural basis of ankyrin-like repeat function as revealed by the solution structure of myotrophin.
Structure, 6, 1998
2N16
DownloadVisualize
BU of 2n16 by Molmil
Solution structure of G-quadruplex recognition domain of RHAU
Descriptor: ATP-dependent RNA helicase DHX36
Authors:Heddi, B, Cheong, V.V, Martadinata, H, Phan, A.T.
Deposit date:2015-03-23
Release date:2015-07-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Insights into G-quadruplex specific recognition by the DEAH-box helicase RHAU: Solution structure of a peptide-quadruplex complex.
Proc.Natl.Acad.Sci.USA, 112, 2015
2ND7
DownloadVisualize
BU of 2nd7 by Molmil
Structure of DK17 in POPC:POPG:Cholesterol:GM1 LUVS
Descriptor: Cell penetrating peptide
Authors:Bera, S, Bhunia, A.
Deposit date:2016-05-11
Release date:2017-03-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Elucidation of the Cell-Penetrating Penetratin Peptide in Model Membranes at the Atomic Level: Probing Hydrophobic Interactions in the Blood-Brain Barrier
Biochemistry, 55, 2016
6UL5
DownloadVisualize
BU of 6ul5 by Molmil
Crystal structure of HIV-1 reverse transcriptase (RT) in complex with 4-[(4-{4-[(E)-2-cyanoethenyl]-2,6-dimethylphenoxy}thieno[3,2-d]pyrimidin-2-yl)amino]-2-fluorobenzonitrile (24b), a non-nucleoside RT inhibitor
Descriptor: 1,2-ETHANEDIOL, 4-[(4-{4-[(E)-2-cyanoethenyl]-2,6-dimethylphenoxy}thieno[3,2-d]pyrimidin-2-yl)amino]-2-fluorobenzonitrile, MAGNESIUM ION, ...
Authors:Ruiz, F.X, Pilch, A, Arnold, E.
Deposit date:2019-10-06
Release date:2020-02-05
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Discovery and Characterization of Fluorine-Substituted Diarylpyrimidine Derivatives as Novel HIV-1 NNRTIs with Highly Improved Resistance Profiles and Low Activity for the hERG Ion Channel.
J.Med.Chem., 63, 2020
2ND6
DownloadVisualize
BU of 2nd6 by Molmil
Structure of DK17 in GM1 LUVS
Descriptor: Cell penetrating peptide
Authors:Bera, S, Bhunia, A.
Deposit date:2016-05-11
Release date:2017-03-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Elucidation of the Cell-Penetrating Penetratin Peptide in Model Membranes at the Atomic Level: Probing Hydrophobic Interactions in the Blood-Brain Barrier
Biochemistry, 55, 2016
7XQ8
DownloadVisualize
BU of 7xq8 by Molmil
Structure of human B-cell antigen receptor of the IgM isotype
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, B-cell antigen receptor complex-associated protein alpha chain, B-cell antigen receptor complex-associated protein beta chain, ...
Authors:Chen, M.Y, Su, Q, Shi, Y.G.
Deposit date:2022-05-07
Release date:2022-08-17
Last modified:2022-08-31
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structure of the human IgM B cell receptor.
Science, 377, 2022
2N45
DownloadVisualize
BU of 2n45 by Molmil
EC-NMR Structure of Escherichia coli Maltose-binding protein Determined by Combining Evolutionary Couplings (EC) and Sparse NMR Data with a second set of RDC data simulated for an alternative alignment tensor. Northeast Structural Genomics Consortium target ER690
Descriptor: Maltose-binding periplasmic protein
Authors:Tang, Y, Huang, Y.J, Hopf, T.A, Sander, C, Marks, D, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2015-06-17
Release date:2015-07-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Protein structure determination by combining sparse NMR data with evolutionary couplings.
Nat.Methods, 12, 2015
8KHP
DownloadVisualize
BU of 8khp by Molmil
CULLIN3-KLHL22-RBX1 E3 ligase
Descriptor: Cullin-3, E3 ubiquitin-protein ligase RBX1, Kelch-like protein 22
Authors:Su, M.-Y, Su, M.-Y.
Deposit date:2023-08-22
Release date:2023-12-13
Method:ELECTRON MICROSCOPY (3.67 Å)
Cite:Cryo-EM structure of the KLHL22 E3 ligase bound to an oligomeric metabolic enzyme.
Structure, 31, 2023
1G8Y
DownloadVisualize
BU of 1g8y by Molmil
CRYSTAL STRUCTURE OF THE HEXAMERIC REPLICATIVE HELICASE REPA OF PLASMID RSF1010
Descriptor: REGULATORY PROTEIN REPA
Authors:Niedenzu, T, Roeleke, D, Bains, G, Scherzinger, E, Saenger, W.
Deposit date:2000-11-21
Release date:2001-02-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the hexameric replicative helicase RepA of plasmid RSF1010.
J.Mol.Biol., 306, 2001
2N1B
DownloadVisualize
BU of 2n1b by Molmil
NMR solution structure of nucleotide-free Ran GTPase
Descriptor: GTP-binding nuclear protein Ran
Authors:Bacot-Davis, V.R, Palmenberg, A.C.
Deposit date:2015-03-26
Release date:2016-04-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR Structure of Ran GTPase Determines C-terminal Tail Conformational Dynamics.
To be Published
7Y5Q
DownloadVisualize
BU of 7y5q by Molmil
Structure of 1:1 PAPP-A.STC2 complex(half map)
Descriptor: Maltose/maltodextrin-binding periplasmic protein,Pappalysin-1, Stanniocalcin-2, ZINC ION
Authors:Zhong, Q.H, Chu, H.L, Wang, G.P, Zhang, C, Wei, Y, Qiao, J, Hang, J.
Deposit date:2022-06-17
Release date:2023-01-11
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural insights into the covalent regulation of PAPP-A activity by proMBP and STC2.
Cell Discov, 8, 2022
5J36
DownloadVisualize
BU of 5j36 by Molmil
Crystal structure of 60-mer BFDV Capsid Protein
Descriptor: Beak and feather disease virus capsid protein, PHOSPHATE ION
Authors:Sarker, S, Raidal, S, Aragao, D, Forwood, J.K.
Deposit date:2016-03-30
Release date:2016-05-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural insights into the assembly and regulation of distinct viral capsid complexes.
Nat Commun, 7, 2016
1TZV
DownloadVisualize
BU of 1tzv by Molmil
T. maritima NusB, P3121, Form 1
Descriptor: N utilization substance protein B homolog
Authors:Bonin, I, Robelek, R, Benecke, H, Urlaub, H, Bacher, A, Richter, G, Wahl, M.C.
Deposit date:2004-07-12
Release date:2004-08-31
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal structures of the antitermination factor NusB from Thermotoga maritima and implications for RNA binding
Biochem.J., 383, 2004
2NSM
DownloadVisualize
BU of 2nsm by Molmil
Crystal structure of the human carboxypeptidase N (Kininase I) catalytic domain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Carboxypeptidase N catalytic chain, SULFATE ION
Authors:Keil, C, Maskos, K, Than, M, Hoopes, J.T, Huber, R, Tan, F, Deddish, P.A, Erdoes, E.G, Skidgel, R.A, Bode, W.
Deposit date:2006-11-05
Release date:2007-04-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the human carboxypeptidase N (kininase I) catalytic domain
J.Mol.Biol., 366, 2007
6OFZ
DownloadVisualize
BU of 6ofz by Molmil
Crystal structure of human WDR5
Descriptor: WD repeat-containing protein 5
Authors:Lorton, B.M, Harijan, R.K, Burgos, E, Bonanno, J.B, Almo, S.C, Shechter, D.
Deposit date:2019-04-01
Release date:2020-04-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:A Binary Arginine Methylation Switch on Histone H3 Arginine 2 Regulates Its Interaction with WDR5.
Biochemistry, 59, 2020
2NVW
DownloadVisualize
BU of 2nvw by Molmil
Crystal sctucture of transcriptional regulator Gal80p from kluyveromymes lactis
Descriptor: Galactose/lactose metabolism regulatory protein GAL80
Authors:Thoden, J.B, Sellick, C.A, Reece, R.J, Holden, H.M.
Deposit date:2006-11-13
Release date:2006-11-21
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Understanding a transcriptional paradigm at the molecular level. The structure of yeast Gal80p.
J.Biol.Chem., 282, 2007
2DA5
DownloadVisualize
BU of 2da5 by Molmil
Solution structure of the second homeobox domain of Zinc fingers and homeoboxes protein 3 (Triple homeobox 1 protein)
Descriptor: Zinc fingers and homeoboxes protein 3
Authors:Ohnishi, S, Kigawa, T, Saito, K, Koshiba, S, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-13
Release date:2006-06-13
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the second homeobox domain of Zinc fingers and homeoboxes protein 3 (Triple homeobox 1 protein)
To be Published
7XW3
DownloadVisualize
BU of 7xw3 by Molmil
Cryo-EM structure of an apo-form of human DICER
Descriptor: Endoribonuclease Dicer
Authors:Lee, H, Roh, S.-H.
Deposit date:2022-05-26
Release date:2023-03-08
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (4.04 Å)
Cite:Structure of the human DICER-pre-miRNA complex in a dicing state.
Nature, 615, 2023
7XW2
DownloadVisualize
BU of 7xw2 by Molmil
Cryo-EM structure of human DICER-pre-miRNA in a dicing state
Descriptor: CALCIUM ION, Endoribonuclease Dicer, RNA (73-MER)
Authors:Lee, H, Roh, S.-H.
Deposit date:2022-05-26
Release date:2023-03-08
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.04 Å)
Cite:Structure of the human DICER-pre-miRNA complex in a dicing state.
Nature, 615, 2023
2O8V
DownloadVisualize
BU of 2o8v by Molmil
PAPS reductase in a covalent complex with thioredoxin C35A
Descriptor: Phosphoadenosine phosphosulfate reductase, Thioredoxin 1
Authors:Chartron, J, Shiau, C, Stout, C.D, Carroll, K.S.
Deposit date:2006-12-12
Release date:2007-03-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:3'-Phosphoadenosine-5'-phosphosulfate Reductase in Complex with Thioredoxin: A Structural Snapshot in the Catalytic Cycle.
Biochemistry, 46, 2007
2OD9
DownloadVisualize
BU of 2od9 by Molmil
Structural Basis for Nicotinamide Inhibition and Base Exchange in Sir2 Enzymes
Descriptor: 5'-O-[(S)-{[(S)-{[(2R,3R,4S)-3,4-DIHYDROXYPYRROLIDIN-2-YL]METHOXY}(HYDROXY)PHOSPHORYL]OXY}(HYDROXY)PHOSPHORYL]ADENOSINE, H4 peptide, NAD-dependent deacetylase HST2, ...
Authors:Marmorstein, R, Sanders, B.D.
Deposit date:2006-12-21
Release date:2007-02-27
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural basis for nicotinamide inhibition and base exchange in sir2 enzymes.
Mol.Cell, 25, 2007
7Y09
DownloadVisualize
BU of 7y09 by Molmil
Cryo-EM structure of human IgM-Fc in complex with the J chain and the DBL domain of DBLMSP
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Immunoglobulin J chain, ...
Authors:Shen, H, Ji, C, Xiao, J.
Deposit date:2022-06-03
Release date:2023-03-29
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.71 Å)
Cite:Plasmodium falciparum has evolved multiple mechanisms to hijack human immunoglobulin M.
Nat Commun, 14, 2023
7YG2
DownloadVisualize
BU of 7yg2 by Molmil
Cryo-EM structure of human IgM-Fc in complex with the J chain and the DBL domain of DBLMSP2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DBLMSP2, ...
Authors:Shen, H, Ji, C, Xiao, J.
Deposit date:2022-07-09
Release date:2023-03-29
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.32 Å)
Cite:Plasmodium falciparum has evolved multiple mechanisms to hijack human immunoglobulin M.
Nat Commun, 14, 2023
2NSU
DownloadVisualize
BU of 2nsu by Molmil
Crystal structure of the ectodomain of human transferrin receptor fitted into a cryo-EM reconstruction of canine parvovirus and feline transferrin receptor complex
Descriptor: Transferrin receptor protein 1
Authors:Hafenstein, S, Kostyuchenko, V.A, Rossmann, M.G.
Deposit date:2006-11-06
Release date:2007-03-27
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (27 Å)
Cite:Asymmetric binding of transferrin receptor to parvovirus capsids.
Proc.Natl.Acad.Sci.Usa, 104, 2007
5K14
DownloadVisualize
BU of 5k14 by Molmil
HIV-1 Reverse Transcriptase in complex with a 2,6-difluorophenyl DAPY analog
Descriptor: 4-{[4-(2,6-difluoro-4-methoxybenzene-1-carbonyl)pyrimidin-2-yl]amino}benzonitrile, HIV-1 reverse transcriptase (isolate LW123), HIV-1 reverse transcriptase(isolate HXB2)
Authors:Lansdon, E.B.
Deposit date:2016-05-17
Release date:2016-06-29
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.402 Å)
Cite:Novel (2,6-difluorophenyl)(2-(phenylamino)pyrimidin-4-yl)methanones with restricted conformation as potent non-nucleoside reverse transcriptase inhibitors against HIV-1.
Eur.J.Med.Chem., 122, 2016

226262

PDB entries from 2024-10-16

PDB statisticsPDBj update infoContact PDBjnumon