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3ETN
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BU of 3etn by Molmil
Crystal structure of putative phosphosugar isomerase involved in capsule formation (YP_209877.1) from Bacteroides fragilis NCTC 9343 at 1.70 A resolution
Descriptor: 1,2-ETHANEDIOL, CYTIDINE 5'-MONOPHOSPHATE 3-DEOXY-BETA-D-GULO-OCT-2-ULO-PYRANOSONIC ACID, putative phosphosugar isomerase involved in capsule formation
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2008-10-08
Release date:2008-10-21
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural analysis of arabinose-5-phosphate isomerase from Bacteroides fragilis and functional implications.
Acta Crystallogr.,Sect.D, 70, 2014
3EU8
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BU of 3eu8 by Molmil
Crystal structure of putative glucoamylase (YP_210071.1) from Bacteroides fragilis NCTC 9343 at 2.12 A resolution
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, POTASSIUM ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2008-10-09
Release date:2008-10-21
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Crystal structure of putative glucoamylase (YP_210071.1) from Bacteroides fragilis NCTC 9343 at 2.12 A resolution
To be published
3EWL
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BU of 3ewl by Molmil
Crystal Structure of Conserved protein BF1870 of Unknown Function from Bacteroides fragilis
Descriptor: uncharacterized conserved protein BF1870
Authors:Kim, Y, Tesar, C, Cobb, G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-10-15
Release date:2008-10-28
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Conserved protein BF1870 of Unknown Function from Bacteroides fragilis
To be Published
3GKX
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BU of 3gkx by Molmil
Crystal structure of putative ArsC family related protein from Bacteroides fragilis
Descriptor: Putative ArsC family related protein
Authors:Chang, C, Tesar, C, Freeman, L, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2009-03-11
Release date:2009-03-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of putative ArsC family related protein from Bacteroides fragilis
To be Published
3GZS
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BU of 3gzs by Molmil
Crystal structure of a susd superfamily protein (bf3413) from bacteroides fragilis nctc 9343 at 2.10 A resolution
Descriptor: ACETATE ION, GLYCEROL, Uncharacterized SusD superfamily protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-04-07
Release date:2009-04-21
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Crystal structure of SusD superfamily protein (YP_213019.1) from Bacteroides fragilis NCTC 9343 at 2.10 A resolution
To be published
3IG2
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BU of 3ig2 by Molmil
The Crystal Structure of a Putative Phenylalanyl-tRNA synthetase (PheRS) beta chain domain from Bacteroides fragilis to 2.1A
Descriptor: MAGNESIUM ION, Phenylalanyl-tRNA synthetase beta chain
Authors:Stein, A.J, Sather, A, Hendricks, R, Keigher, L, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2009-07-27
Release date:2009-09-01
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:The Crystal Structure of a Putative Phenylalanyl-tRNA synthetase (PheRS) beta chain domain from Bacteroides fragilis to 2.1A
To be Published
3EVY
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BU of 3evy by Molmil
Crystal structure of a fragment of a putative type I restriction enzyme R protein from Bacteroides fragilis
Descriptor: Putative type I restriction enzyme R protein
Authors:Bonanno, J.B, Gilmore, M, Bain, K.T, Miller, S, Sampathkumar, P, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-10-13
Release date:2008-10-21
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of a fragment of a putative type I restriction enzyme R protein from Bacteroides fragilis
To be Published
3PET
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BU of 3pet by Molmil
Crystal structure of a putative adhesin (BF0245) from Bacteroides fragilis NCTC 9343 at 2.07 A resolution
Descriptor: ACETATE ION, CHLORIDE ION, Putative adhesin, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2010-10-27
Release date:2011-02-09
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Crystal structure of a putative adhesin (BF0245) from Bacteroides fragilis NCTC 9343 at 2.07 A resolution
To be published
3FHL
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Crystal structure of a putative oxidoreductase from bacteroides fragilis nctc 9343
Descriptor: GLYCEROL, MAGNESIUM ION, Putative oxidoreductase
Authors:Patskovsky, Y, Ramagopal, U, Toro, R, Gilmore, M, Miller, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-12-09
Release date:2008-12-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Crystal Structure of a Putative Oxidoreductase from Bacteroides Fragilis Nctc 9343
To be Published
3NQP
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BU of 3nqp by Molmil
Crystal structure of a SusD superfamily protein (BF1802) from Bacteroides fragilis NCTC 9343 at 1.90 A resolution
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2010-06-29
Release date:2010-10-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of a SusD superfamily protein (BF1802) from Bacteroides fragilis NCTC 9343 at 1.90 A resolution
To be published
3RWX
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Crystal structure of a putative outer membrane protein (BF2706) from Bacteroides fragilis NCTC 9343 at 2.40 A resolution
Descriptor: GLYCEROL, Hypothetical bacterial outer membrane protein, SULFATE ION
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2011-05-09
Release date:2011-06-08
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of a Hypothetical bacterial outer membrane protein (BF2706) from Bacteroides fragilis NCTC 9343 at 2.40 A resolution
To be published
3K50
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BU of 3k50 by Molmil
Crystal structure of Putative S41 protease (YP_211611.1) from Bacteroides fragilis NCTC 9343 at 2.00 A resolution
Descriptor: CHLORIDE ION, GLYCEROL, Putative S41 protease
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-10-06
Release date:2009-10-13
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of Putative S41 protease (YP_211611.1) from Bacteroides fragilis NCTC 9343 at 2.00 A resolution
To be published
3SLR
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BU of 3slr by Molmil
Crystal structure of N-terminal part of the protein BF1531 from Bacteroides fragilis containing phosphatase domain complexed with Mg.
Descriptor: MAGNESIUM ION, uncharacterized protein BF1531
Authors:Fedorov, A.A, Fedorov, E.V, Toro, R, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2011-06-24
Release date:2011-07-20
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.712 Å)
Cite:Crystal structure of N-terminal part of the protein BF1531 from Bacteroides fragilis containing phosphatase domain complexed with Mg.
TO BE PUBLISHED
7POO
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BU of 7poo by Molmil
Crystal structure of profragilysin-3 (proBFT-3) from Bacteroides fragilis in complex with foliosidine in P212121.
Descriptor: ACETATE ION, BFT-3, PROLINE, ...
Authors:Eckhard, U, Guevara, T, Gomis-Ruth, F.X.
Deposit date:2021-09-09
Release date:2022-09-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Repositioning small molecule drugs as allosteric inhibitors of the BFT-3 toxin from enterotoxigenic Bacteroides fragilis.
Protein Sci., 31, 2022
7POQ
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BU of 7poq by Molmil
Crystal structure of profragilysin-3 (proBFT-3) from Bacteroides fragilis in complex with foliosidine in P41212.
Descriptor: 1,2-ETHANEDIOL, BFT-3, CHLORIDE ION, ...
Authors:Eckhard, U, Guevara, T, Gomis-Ruth, F.X.
Deposit date:2021-09-09
Release date:2022-09-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Repositioning small molecule drugs as allosteric inhibitors of the BFT-3 toxin from enterotoxigenic Bacteroides fragilis.
Protein Sci., 31, 2022
7PND
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BU of 7pnd by Molmil
Crystal structure of profragilysin-3 (proBFT-3) from Bacteroides fragilis at 1.85 A resolution.
Descriptor: BFT-3, DIMETHYL SULFOXIDE, FORMIC ACID, ...
Authors:Eckhard, U, Guevara, T, Gomis-Ruth, F.X.
Deposit date:2021-09-06
Release date:2022-09-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Repositioning small molecule drugs as allosteric inhibitors of the BFT-3 toxin from enterotoxigenic Bacteroides fragilis.
Protein Sci., 31, 2022
7POL
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BU of 7pol by Molmil
Crystal structure of profragilysin-3 (proBFT-3) from Bacteroides fragilis in complex with flumequine
Descriptor: (12~{R})-7-fluoranyl-12-methyl-4-oxidanylidene-1-azatricyclo[7.3.1.0^{5,13}]trideca-2,5(13),6,8-tetraene-3-carboxylic acid, BFT-3, CHLORIDE ION, ...
Authors:Eckhard, U, Guevara, T, Gomis-Ruth, F.X.
Deposit date:2021-09-09
Release date:2022-09-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Repositioning small molecule drugs as allosteric inhibitors of the BFT-3 toxin from enterotoxigenic Bacteroides fragilis.
Protein Sci., 31, 2022
7POU
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BU of 7pou by Molmil
Crystal structure of profragilysin-3 (proBFT-3) from Bacteroides fragilis in complex with hesperetin.
Descriptor: (2S)-5,7-dihydroxy-2-(3-hydroxy-4-methoxyphenyl)-2,3-dihydro-4H-1-benzopyran-4-one, BFT-3, DIMETHYL SULFOXIDE, ...
Authors:Eckhard, U, Guevara, T, Gomis-Ruth, F.X.
Deposit date:2021-09-09
Release date:2022-09-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Repositioning small molecule drugs as allosteric inhibitors of the BFT-3 toxin from enterotoxigenic Bacteroides fragilis.
Protein Sci., 31, 2022
7QNB
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BU of 7qnb by Molmil
Cryo-EM structure of human full-length beta3gamma2 GABA(A)R in complex with GABA and nanobody Nb25
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GAMMA-AMINO-BUTANOIC ACID, ...
Authors:Sente, A, Desai, R, Naydenova, K, Malinauskas, T, Jounaidi, Y, Miehling, J, Zhou, X, Masiulis, S, Hardwick, S.W, Chirgadze, D.Y, Miller, K.W, Aricescu, A.R.
Deposit date:2021-12-20
Release date:2022-04-13
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Differential assembly diversifies GABA A receptor structures and signalling.
Nature, 604, 2022
7QVP
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BU of 7qvp by Molmil
Human collided disome (di-ribosome) stalled on XBP1 mRNA
Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ...
Authors:Denk, T.G, Tesina, P, Beckmann, R.
Deposit date:2022-01-22
Release date:2022-10-12
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3 Å)
Cite:A distinct mammalian disome collision interface harbors K63-linked polyubiquitination of uS10 to trigger hRQT-mediated subunit dissociation.
Nat Commun, 13, 2022
7QGG
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BU of 7qgg by Molmil
Neuronal RNA granules are ribosome complexes stalled at the pre-translocation state
Descriptor: 40S ribosomal protein S10, 40S ribosomal protein S11, 40S ribosomal protein S12, ...
Authors:Pulk, A, Kipper, K, Mansour, A.
Deposit date:2021-12-08
Release date:2022-10-26
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.86 Å)
Cite:Neuronal RNA granules are ribosome complexes stalled at the pre-translocation state.
J.Mol.Biol., 434, 2022
7R7B
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BU of 7r7b by Molmil
1.50 Angstroem Crystal Structure of FeoA from Bacteroides fragilis
Descriptor: Ferrous iron transport protein B, GLYCEROL, PHOSPHATE ION
Authors:Sestok, A.E, Smith, A.T.
Deposit date:2021-06-24
Release date:2022-04-27
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A fusion of the Bacteroides fragilis ferrous iron import proteins reveals a role for FeoA in stabilizing GTP-bound FeoB.
J.Biol.Chem., 298, 2022
7REW
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BU of 7rew by Molmil
Crystal Structure of IL-13 in complex with MMAb3 Fab
Descriptor: IL13, anti-cyno interleukin 13 Fab heavy chain, anti-cyno interleukin 13 Fab light chain
Authors:Sudom, A, Min, X.
Deposit date:2021-07-13
Release date:2022-05-25
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Development of a potent high-affinity human therapeutic antibody via novel application of recombination signal sequence-based affinity maturation.
J.Biol.Chem., 298, 2022
3GJO
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BU of 3gjo by Molmil
Crystal structure of human EB1 in complex with microtubule Tip localization signal peptide of MACF
Descriptor: Dystonin, Microtubule-associated protein RP/EB family member 1
Authors:Honnappa, S, Steinmetz, M.O.
Deposit date:2009-03-09
Release date:2009-08-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:An EB1-binding motif acts as a microtubule tip localization signal
Cell(Cambridge,Mass.), 138, 2009
4YEX
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HUaa-19bp
Descriptor: DNA-binding protein HU-alpha, synthetic DNA strand
Authors:Hammel, M, Reyes, F.E, Parpana, R, Tainer, J.A, Adhya, S, Amlanjyoti, D.
Deposit date:2015-02-24
Release date:2016-06-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:HU multimerization shift controls nucleoid compaction.
Sci Adv, 2, 2016

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PDB entries from 2024-08-07

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