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PDB: 40 results

1LGN
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BU of 1lgn by Molmil
DECAMERIC DAMP COMPLEX OF HUMAN SERUM AMYLOID P COMPONENT
Descriptor: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE, CALCIUM ION, SERUM AMYLOID P COMPONENT
Authors:Hohenester, E, Pepys, M.B, Wood, S.P.
Deposit date:1996-12-04
Release date:1997-12-24
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of a decameric complex of human serum amyloid P component with bound dAMP.
J.Mol.Biol., 269, 1997
8B55
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BU of 8b55 by Molmil
Human ADGRG4 PTX-like domain
Descriptor: Adhesion G-protein coupled receptor G4, MAGNESIUM ION
Authors:Kieslich, B, Straeter, N.
Deposit date:2022-09-21
Release date:2022-10-19
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:The dimerized pentraxin-like domain of the adhesion G protein-coupled receptor 112 (ADGRG4) suggests function in sensing mechanical forces.
J.Biol.Chem., 299, 2023
6YPE
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BU of 6ype by Molmil
Crystal structure of the human neuronal pentraxin 1 (NP1) pentraxin (PTX) domain.
Descriptor: CACODYLATE ION, CALCIUM ION, Neuronal pentraxin-1
Authors:Elegheert, J, Clayton, A.J, Aricescu, A.R.
Deposit date:2020-04-15
Release date:2020-06-03
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:A synthetic synaptic organizer protein restores glutamatergic neuronal circuits.
Science, 369, 2020
1SAC
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BU of 1sac by Molmil
THE STRUCTURE OF PENTAMERIC HUMAN SERUM AMYLOID P COMPONENT
Descriptor: ACETIC ACID, CALCIUM ION, SERUM AMYLOID P COMPONENT
Authors:White, H.E, Emsley, J, O'Hara, B.P, Oliva, G, Srinivasan, N, Tickle, I.J, Blundell, T.L, Pepys, M.B, Wood, S.P.
Deposit date:1994-01-27
Release date:1994-05-31
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of pentameric human serum amyloid P component.
Nature, 367, 1994
7ZL1
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BU of 7zl1 by Molmil
PTX3 Pentraxin Domain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Pentraxin-related protein PTX3
Authors:Noone, D.P, Sharp, T.H.
Deposit date:2022-04-13
Release date:2022-08-03
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:PTX3 structure determination using a hybrid cryoelectron microscopy and AlphaFold approach offers insights into ligand binding and complement activation.
Proc.Natl.Acad.Sci.USA, 119, 2022
1B09
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BU of 1b09 by Molmil
HUMAN C-REACTIVE PROTEIN COMPLEXED WITH PHOSPHOCHOLINE
Descriptor: CALCIUM ION, PHOSPHOCHOLINE, PROTEIN (C-REACTIVE PROTEIN)
Authors:Thompson, D, Pepys, M.B, Wood, S.P.
Deposit date:1998-11-18
Release date:1999-12-03
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The physiological structure of human C-reactive protein and its complex with phosphocholine.
Structure Fold.Des., 7, 1999
7TBA
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BU of 7tba by Molmil
Pentraxin - ligand complex
Descriptor: C-reactive protein, CALCIUM ION, [3-(dibutylamino)propyl]phosphonic acid
Authors:Shing, K.S.C.T, Morton, C.J, Parker, M.W.
Deposit date:2021-12-21
Release date:2022-10-19
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:A novel phosphocholine-mimetic inhibits a pro-inflammatory conformational change in C-reactive protein.
Embo Mol Med, 15, 2023
2W08
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BU of 2w08 by Molmil
The structure of serum amyloid P component bound to 0-phospho- threonine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, PHOSPHOTHREONINE, ...
Authors:Kolstoe, S.E, Pepys, M.B, Wood, S.P.
Deposit date:2008-08-12
Release date:2009-04-14
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Molecular Dissection of Alzheimer'S Disease Neuropathology by Depletion of Serum Amyloid P Component.
Proc.Natl.Acad.Sci.USA, 106, 2009
1LJ7
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BU of 1lj7 by Molmil
Crystal structure of calcium-depleted human C-reactive protein from perfectly twinned data
Descriptor: C-reactive protein
Authors:Ramadan, M.A, Shrive, A.K, Holden, D, Myles, D.A, Volanakis, J.E, DeLucas, L.J, Greenhough, T.J.
Deposit date:2002-04-19
Release date:2002-06-05
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:The three-dimensional structure of calcium-depleted human C-reactive protein from perfectly twinned crystals.
Acta Crystallogr.,Sect.D, 58, 2002
3L2Y
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BU of 3l2y by Molmil
The structure of C-reactive protein bound to phosphoethanolamine
Descriptor: C-reactive protein, CALCIUM ION, PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER
Authors:Mikolajek, H, Kolstoe, S.E, Wood, S.P, Pepys, M.B.
Deposit date:2009-12-15
Release date:2010-12-08
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis of ligand specificity in the human pentraxins, C-reactive protein and serum amyloid P component.
J.Mol.Recognit., 24, 2011
3FLP
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BU of 3flp by Molmil
Crystal structure of native heptameric SAP-like pentraxin from Limulus polyphemus
Descriptor: CALCIUM ION, SAP-like pentraxin
Authors:Shrive, A.K, Greenhough, T.J, Armstrong, P.B.
Deposit date:2008-12-19
Release date:2009-01-20
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of Limulus SAP-like pentraxin reveal two molecular aggregations.
J.Mol.Biol., 386, 2009
8PVQ
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BU of 8pvq by Molmil
Crystal Structure of Human PTX3 C-terminal domain
Descriptor: Pentraxin-related protein PTX3
Authors:Levy, C.W.
Deposit date:2023-07-18
Release date:2024-07-24
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Pentraxin 3 mediated crosslinking of heavy chain hyaluronan complexes: new insights from structural and biophysical studies
To Be Published
3FLT
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BU of 3flt by Molmil
Crystal structure of PE-bound octameric SAP-like pentraxin from Limulus polyphemus
Descriptor: CALCIUM ION, PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER, SAP-like pentraxin
Authors:Shrive, A.K, Greenhough, T.J, Armstrong, P.B.
Deposit date:2008-12-19
Release date:2009-01-20
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structures of Limulus SAP-like pentraxin reveal two molecular aggregations.
J.Mol.Biol., 386, 2009
4PBP
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BU of 4pbp by Molmil
crystal structure of zebrafish short-chain pentraxin protein
Descriptor: C-reactive protein, CALCIUM ION, GLYCEROL
Authors:Chen, R, Qi, J.X, George, F.G, Xia, C.
Deposit date:2014-04-13
Release date:2015-03-25
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.648 Å)
Cite:Crystal structures for short-chain pentraxin from zebrafish demonstrate a cyclic trimer with new recognition and effector faces.
J.Struct.Biol., 189, 2015
3KQR
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BU of 3kqr by Molmil
The structure of serum amyloid p component bound to phosphoethanolamine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER, ...
Authors:Mikolajek, H, Kolstoe, S.E, Wood, S.P, Pepys, M.B.
Deposit date:2009-11-17
Release date:2010-12-08
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural basis of ligand specificity in the human pentraxins, C-reactive protein and serum amyloid P component.
J.Mol.Recognit., 24, 2011
8WV5
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BU of 8wv5 by Molmil
C-reactive protein, decamer
Descriptor: C-reactive protein(1-205), CALCIUM ION
Authors:Yadav, S, Vinothkumar, K.R.
Deposit date:2023-10-23
Release date:2024-07-17
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Factors affecting macromolecule orientations in thin films formed in cryo-EM.
Acta Crystallogr D Struct Biol, 80, 2024
8WV4
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BU of 8wv4 by Molmil
C-reactive protein, pentamer
Descriptor: C-reactive protein(1-205), CALCIUM ION
Authors:Yadav, S, Vinothkumar, K.R.
Deposit date:2023-10-23
Release date:2024-07-17
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Factors affecting macromolecule orientations in thin films formed in cryo-EM.
Acta Crystallogr D Struct Biol, 80, 2024
8S50
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BU of 8s50 by Molmil
Cryo-EM structure of the C terminal region of PTX3 with a section of coiled-coil
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Pentraxin-related protein PTX3
Authors:Snee, M, Shah, A, Lockhart-Cairns, M, Collins, R, Levy, C, Baldock, C, Day, A.
Deposit date:2024-02-22
Release date:2025-01-22
Last modified:2025-03-12
Method:ELECTRON MICROSCOPY (3.33 Å)
Cite:The structural organisation of pentraxin-3 and its interactions with heavy chains of inter-alpha-inhibitor regulate crosslinking of the hyaluronan matrix.
Matrix Biol., 136, 2025
1GNH
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BU of 1gnh by Molmil
HUMAN C-REACTIVE PROTEIN
Descriptor: C-REACTIVE PROTEIN, CALCIUM ION
Authors:Shrive, A.K, Cheetham, G.M.T, Holden, D, Myles, D.A, Turnell, W.G, Volanakis, J.E, Pepys, M.B, Bloomer, A.C, Greenhough, T.J.
Deposit date:1996-03-01
Release date:1997-01-27
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Three dimensional structure of human C-reactive protein.
Nat.Struct.Biol., 3, 1996
4PBO
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BU of 4pbo by Molmil
Crystal structure of zebrafish short-chain pentraxin protein without calcium ions
Descriptor: C-reactive protein
Authors:Chen, R, Qi, J.X, George, F.G, Xia, C.
Deposit date:2014-04-13
Release date:2015-03-25
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.701 Å)
Cite:Crystal structures for short-chain pentraxin from zebrafish demonstrate a cyclic trimer with new recognition and effector faces.
J.Struct.Biol., 189, 2015
3PVO
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BU of 3pvo by Molmil
Monoclinic form of Human C-Reactive Protein
Descriptor: C-Reactive Protein, CALCIUM ION
Authors:Guillon, C, Mavoungou Bigouagou, U, Jeannin, P, Delneste, Y, Gouet, P.
Deposit date:2010-12-07
Release date:2012-01-11
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (3 Å)
Cite:A Staggered Decameric Assembly of Human C-Reactive Protein Stabilized by Zinc Ions Revealed by X-ray Crystallography.
Protein Pept.Lett., 22, 2014
3PVN
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BU of 3pvn by Molmil
Triclinic form of Human C-Reactive Protein in complex with Zinc
Descriptor: C-reactive protein, CALCIUM ION, ZINC ION
Authors:Guillon, C, Mavoungou Bigouagou, U, Jeannin, P, Delneste, Y, Gouet, P.
Deposit date:2010-12-07
Release date:2012-01-11
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:A Staggered Decameric Assembly of Human C-Reactive Protein Stabilized by Zinc Ions Revealed by X-ray Crystallography.
Protein Pept.Lett., 22, 2014
1GYK
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BU of 1gyk by Molmil
Serum Amyloid P Component co-crystallised with MOBDG at neutral pH
Descriptor: CALCIUM ION, METHYL 4,6-O-[(1R)-1-CARBOXYETHYLIDENE]-BETA-D-GALACTOPYRANOSIDE, SERUM AMYLOID P-COMPONENT
Authors:Thompson, D, Pepys, M.B, Tickle, I, Wood, S.P.
Deposit date:2002-04-25
Release date:2003-05-22
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Structures of Crystalline Complexes of Human Serum Amyloid P Component with its Carbohydrate Ligand, the Cyclic Pyruvate Acetal of Galactose
J.Mol.Biol., 320, 2002
3FLR
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BU of 3flr by Molmil
Crystal structure of native octameric SAP-like pentraxin from Limulus polyphemus
Descriptor: CALCIUM ION, SAP-like pentraxin
Authors:Shrive, A.K, Greenhough, T.J, Armstrong, P.B.
Deposit date:2008-12-19
Release date:2009-01-20
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structures of Limulus SAP-like pentraxin reveal two molecular aggregations.
J.Mol.Biol., 386, 2009
2A3Y
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BU of 2a3y by Molmil
Pentameric crystal structure of human serum amyloid P-component bound to Bis-1,2-{[(Z)-2carboxy-2-methyl-1,3-dioxane]-5-yloxycarbamoyl}-ethane.
Descriptor: BIS-1,2-{[(Z)-2-CARBOXY-2-METHYL-1,3-DIOXANE]-5-YLOXYCARBAMOYL}-ETHANE, CALCIUM ION, Serum amyloid P-component
Authors:Ho, J.G, Kitov, P.I, Paszkiewicz, E, Sadowska, J, Bundle, D.R, Ng, K.K.
Deposit date:2005-06-27
Release date:2005-07-26
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Ligand-assisted Aggregation of Proteins: DIMERIZATION OF SERUM AMYLOID P COMPONENT BY BIVALENT LIGANDS.
J.Biol.Chem., 280, 2005

 

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