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6T2C
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BU of 6t2c by Molmil
Bat Influenza A polymerase recycling complex
Descriptor: MAGNESIUM ION, Polymerase acidic protein, Polymerase basic protein 2, ...
Authors:Wandzik, J.M, Kouba, T, Cusack, S.
Deposit date:2019-10-08
Release date:2020-04-15
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.52 Å)
Cite:A Structure-Based Model for the Complete Transcription Cycle of Influenza Polymerase.
Cell, 181, 2020
1MWH
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BU of 1mwh by Molmil
REOVIRUS POLYMERASE LAMBDA3 BOUND TO MRNA CAP ANALOG
Descriptor: 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-GUANOSINE, MANGANESE (II) ION, MINOR CORE PROTEIN LAMBDA 3
Authors:Tao, Y, Farsetta, D.L, Nibert, M.L, Harrison, S.C.
Deposit date:2002-09-29
Release date:2002-12-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:RNA Synthesis in a Cage-Structural Studies of Reovirus Polymerase lambda3
Cell(Cambridge,Mass.), 111, 2002
7EKJ
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BU of 7ekj by Molmil
Crystals structure of classical swine fever virus NS5B (residues 91-694)
Descriptor: Classical swine fever virus NS5B
Authors:Liu, W, Gong, P.
Deposit date:2021-04-05
Release date:2021-07-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.06 Å)
Cite:An induced-fit de novo initiation mechanism suggested by a pestivirus RNA-dependent RNA polymerase.
Nucleic Acids Res., 49, 2021
6XEZ
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BU of 6xez by Molmil
Structure of SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, CHAPSO, ...
Authors:Chen, J, Malone, B, Llewellyn, E.C, Campbell, E.A, Darst, S.A.
Deposit date:2020-06-14
Release date:2020-07-29
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural Basis for Helicase-Polymerase Coupling in the SARS-CoV-2 Replication-Transcription Complex.
Cell, 182, 2020
5MDT
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BU of 5mdt by Molmil
Structure of the CTD-interacting domain (CID) of Seb1 from S. pombe.
Descriptor: Rpb7-binding protein seb1
Authors:Wittmann, S, Renner, M, Vasiljeva, L, Grimes, J.
Deposit date:2016-11-13
Release date:2017-04-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:The conserved protein Seb1 drives transcription termination by binding RNA polymerase II and nascent RNA.
Nat Commun, 8, 2017
6CUX
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BU of 6cux by Molmil
Escherichia coli RpoB S531L mutant RNA polymerase holoenzyme in complex with Kanglemycin A
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Molodtsov, V, Murakami, K.S.
Deposit date:2018-03-26
Release date:2018-07-25
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (4.104 Å)
Cite:Mode of Action of Kanglemycin A, an Ansamycin Natural Product that Is Active against Rifampicin-Resistant Mycobacterium tuberculosis.
Mol. Cell, 72, 2018
7ELA
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BU of 7ela by Molmil
Structure of Lassa virus polymerase in complex with 3'-vRNA and Z mutant (F36A)
Descriptor: 3-'vRNA promoter, MANGANESE (II) ION, RING finger protein Z, ...
Authors:Xu, X, Peng, R, Peng, Q, Shi, Y.
Deposit date:2021-04-09
Release date:2021-05-05
Last modified:2021-07-14
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM structures of Lassa and Machupo virus polymerases complexed with cognate regulatory Z proteins identify targets for antivirals.
Nat Microbiol, 6, 2021
7EL9
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BU of 7el9 by Molmil
Structure of Machupo virus L polymerase in complex with Z protein and 3'-vRNA (dimeric complex)
Descriptor: MANGANESE (II) ION, Machupo virus 3'-vRNA promoter, RING finger protein Z, ...
Authors:Peng, R, Xu, X, Peng, Q, Shi, Y.
Deposit date:2021-04-09
Release date:2021-05-05
Last modified:2021-07-14
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structures of Lassa and Machupo virus polymerases complexed with cognate regulatory Z proteins identify targets for antivirals.
Nat Microbiol, 6, 2021
6PLN
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BU of 6pln by Molmil
X-ray crystal structure of Pyrococcus furiosus general transcription factor TFE-alpha
Descriptor: Transcription factor E
Authors:Murakami, K.S, Jun, S.H.
Deposit date:2019-07-01
Release date:2020-07-08
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Direct binding of TFE alpha opens DNA binding cleft of RNA polymerase.
Nat Commun, 11, 2020
6FLQ
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BU of 6flq by Molmil
CryoEM structure of E.coli RNA polymerase paused elongation complex bound to NusA
Descriptor: DNA (31-MER), DNA (39-MER), DNA-directed RNA polymerase subunit alpha, ...
Authors:Guo, X, Weixlbaumer, A.
Deposit date:2018-01-26
Release date:2018-03-21
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural Basis for NusA Stabilized Transcriptional Pausing.
Mol. Cell, 69, 2018
5VSW
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BU of 5vsw by Molmil
X-ray crystal structure of Escherichia coli RNA polymerase and DksA/ppGpp complex
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Murakami, K.S, Molodtsov, V.
Deposit date:2017-05-12
Release date:2017-06-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (4.295 Å)
Cite:Allosteric Effector ppGpp Potentiates the Inhibition of Transcript Initiation by DksA.
Mol. Cell, 69, 2018
5W1T
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BU of 5w1t by Molmil
X-ray crystal structure of Escherichia coli RNA polymerase and DksA complex
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Murakami, K.S, Molodtsov, V.
Deposit date:2017-06-04
Release date:2017-06-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (4.5 Å)
Cite:Allosteric Effector ppGpp Potentiates the Inhibition of Transcript Initiation by DksA.
Mol. Cell, 69, 2018
7ELC
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BU of 7elc by Molmil
Structure of monomeric complex of MACV L bound to Z and 3'-vRNA
Descriptor: 3'-vRNA promoter, MANGANESE (II) ION, RING finger protein Z, ...
Authors:Xu, X, Peng, R, Peng, Q, Shi, Y.
Deposit date:2021-04-09
Release date:2021-05-05
Last modified:2021-07-14
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM structures of Lassa and Machupo virus polymerases complexed with cognate regulatory Z proteins identify targets for antivirals.
Nat Microbiol, 6, 2021
6CUU
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BU of 6cuu by Molmil
Thermus thermophiles RNA polymerase in complex with promoter DNA and antibiotic Kanglemycin A
Descriptor: DNA (5'-D(*TP*AP*TP*AP*AP*TP*GP*GP*GP*AP*GP*CP*CP*TP*CP*TP*GP*AP*TP*GP*CP*A)-3'), DNA (5'-D(P*TP*GP*CP*AP*TP*CP*AP*GP*AP*GP*CP*CP*CP*AP*AP*AP*A)-3'), DNA-directed RNA polymerase subunit alpha, ...
Authors:Molodtsov, V, Murakami, K.S.
Deposit date:2018-03-26
Release date:2018-07-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.994 Å)
Cite:Mode of Action of Kanglemycin A, an Ansamycin Natural Product that Is Active against Rifampicin-Resistant Mycobacterium tuberculosis.
Mol. Cell, 72, 2018
6TU5
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BU of 6tu5 by Molmil
Influenza A/H7N9 polymerase core (apo)
Descriptor: MAGNESIUM ION, Polymerase acidic protein, Polymerase basic protein 2, ...
Authors:Cusack, S, Pflug, A.
Deposit date:2020-01-02
Release date:2020-04-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.325 Å)
Cite:A Structure-Based Model for the Complete Transcription Cycle of Influenza Polymerase.
Cell, 181, 2020
5OHO
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BU of 5oho by Molmil
Crystal structure of the KOWx-KOW4 domain of human DSIF
Descriptor: CHLORIDE ION, GLYCEROL, Transcription elongation factor SPT5
Authors:Bernecky, C, Plitzko, J.M, Cramer, P.
Deposit date:2017-07-17
Release date:2017-09-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:Structure of a transcribing RNA polymerase II-DSIF complex reveals a multidentate DNA-RNA clamp.
Nat. Struct. Mol. Biol., 24, 2017
8KDB
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BU of 8kdb by Molmil
Cryo-EM structure of the human parainfluenza virus hPIV3 L-P polymerase in dimeric form
Descriptor: MAGNESIUM ION, Phosphoprotein, RNA-directed RNA polymerase L, ...
Authors:Xie, J, Wang, L, Zhai, G, Wu, D, Lin, Z, Wang, M, Yan, X, Gao, L, Huang, X, Fearns, R, Chen, S.
Deposit date:2023-08-09
Release date:2024-04-24
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural basis for dimerization of a paramyxovirus polymerase complex.
Nat Commun, 15, 2024
8KDC
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BU of 8kdc by Molmil
Cryo-EM structure of the human parainfluenza virus hPIV3 L-P polymerase in monomeric form
Descriptor: MAGNESIUM ION, Phosphoprotein, RNA-directed RNA polymerase L, ...
Authors:Xie, J, Wang, L, Zhai, G, Wu, D, Lin, Z, Wang, M, Yan, X, Gao, L, Huang, X, Fearns, R, Chen, S.
Deposit date:2023-08-09
Release date:2024-04-24
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis for dimerization of a paramyxovirus polymerase complex.
Nat Commun, 15, 2024
7ELB
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BU of 7elb by Molmil
Structure of Machupo virus L polymerase in complex with Z protein (dimeric form)
Descriptor: MANGANESE (II) ION, RING finger protein Z, RNA-directed RNA polymerase L, ...
Authors:Peng, R, Xu, X, Peng, Q, Shi, Y.
Deposit date:2021-04-09
Release date:2021-05-05
Last modified:2021-07-14
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Cryo-EM structures of Lassa and Machupo virus polymerases complexed with cognate regulatory Z proteins identify targets for antivirals.
Nat Microbiol, 6, 2021
8PDY
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BU of 8pdy by Molmil
E. coli RNA polymerase paused at ops site
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Zuber, P.K, Said, N, Hilal, T, Loll, B, Wahl, M.C, Knauer, S.H.
Deposit date:2023-06-13
Release date:2024-04-24
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Concerted transformation of a hyper-paused transcription complex and its reinforcing protein.
Nat Commun, 15, 2024
8PH9
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BU of 8ph9 by Molmil
E. coli RNA polymerase paused at ops site (non-complementary scaffold)
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Zuber, P.K, Said, N, Hilal, T, Loll, B, Wahl, M.C, Knauer, S.H.
Deposit date:2023-06-19
Release date:2024-04-24
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Concerted transformation of a hyper-paused transcription complex and its reinforcing protein.
Nat Commun, 15, 2024
4KBM
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BU of 4kbm by Molmil
Structure of the Mtb CarD/RNAP Beta subunit B1-B2 domains complex
Descriptor: DNA-directed RNA polymerase subunit beta, RNA polymerase-binding transcription factor CarD
Authors:Gulten, G, Sacchettini, J.C, TB Structural Genomics Consortium (TBSGC)
Deposit date:2013-04-23
Release date:2013-10-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1146 Å)
Cite:Structure of the Mtb CarD/RNAP beta-Lobes Complex Reveals the Molecular Basis of Interaction and Presents a Distinct DNA-Binding Domain for Mtb CarD.
Structure, 21, 2013
6KUU
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BU of 6kuu by Molmil
Structure of influenza D virus polymerase bound to vRNA promoter in Mode B conformation (Class B3)
Descriptor: 3'-vRNA, 5'-vRNA, Polymerase 3, ...
Authors:Peng, Q, Peng, R, Qi, J, Gao, G.F, Shi, Y.
Deposit date:2019-09-02
Release date:2019-12-11
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structure of influenza D virus polymerase bound to vRNA promoter in Mode B conformation (Class B3)
To Be Published
6IPJ
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BU of 6ipj by Molmil
Binary Complex of Human DNA Polymerase Mu with MndTTP
Descriptor: DNA-directed DNA/RNA polymerase mu,DNA-directed DNA/RNA polymerase mu, MANGANESE (II) ION, SULFATE ION, ...
Authors:Chang, Y.K, Wu, W.J, Tsai, M.D.
Deposit date:2018-11-03
Release date:2019-05-29
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Human DNA Polymerase mu Can Use a Noncanonical Mechanism for Multiple Mn2+-Mediated Functions.
J.Am.Chem.Soc., 141, 2019
4LQ9
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BU of 4lq9 by Molmil
Crystal structure of human norovirus RNA-dependent RNA-polymerase in complex with NAF2
Descriptor: MAGNESIUM ION, RNA-dependent RNA-polymerase, naphthalene-1,5-disulfonic acid
Authors:Milani, M, Tarantino, D, Mastrangelo, E, Croci, R.
Deposit date:2013-07-17
Release date:2014-02-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Naphthalene-sulfonate inhibitors of human norovirus RNA-dependent RNA-polymerase.
Antiviral Res., 102, 2014

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數據於2024-07-24公開中

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