PDB: 160289 resultsInfo pagesStatus searchChemie searchBIRD

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8K3F	Crystal structure of the recombination mediator protein RecR from Campylobacter jejuni Descriptor: Recombination protein RecR, ZINC ION Authors: Lee, S.J, Yoon, S.I. Deposit date: 2023-07-15 Release date: 2023-11-01 Method: X-RAY DIFFRACTION (2.603 Å) Cite: Structural and Biochemical Analysis of the Recombination Mediator Protein RecR from Campylobacter jejuni. Int J Mol Sci, 24, 2023
3M2C	Crystallographic and Single Crystal Spectral Analysis of the Peroxidase Ferryl Intermediate Descriptor: Cytochrome c peroxidase, mitochondrial, PHOSPHATE ION, ... Authors: Meharenna, Y.T, Poulos, T.L. Deposit date: 2010-03-06 Release date: 2010-05-12 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Crystallographic and single-crystal spectral analysis of the peroxidase ferryl intermediate. Biochemistry, 49, 2010
3M2B	Crystallographic and Single Crystal Spectral Analysis of the Peroxidase Ferryl Intermediate Descriptor: Cytochrome c peroxidase, mitochondrial, PHOSPHATE ION, ... Authors: Meharenna, Y.T, Poulos, T.L. Deposit date: 2010-03-06 Release date: 2010-05-12 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Crystallographic and single-crystal spectral analysis of the peroxidase ferryl intermediate. Biochemistry, 49, 2010
3HZQ	Structure of a tetrameric MscL in an expanded intermediate state Descriptor: Large-conductance mechanosensitive channel Authors: Liu, Z.F, Gandhi, C.S, Rees, D.C. Deposit date: 2009-06-24 Release date: 2009-08-25 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (3.82 Å) Cite: Structure of a tetrameric MscL in an expanded intermediate state. Nature, 461, 2009
3BB0	Crystal Structure of a Trapped Phosphate-Intermediate in Vanadium Apochloroperoxidase Catalyzing a Dephosphorylation Reaction Descriptor: PHOSPHITE ION, SULFATE ION, Vanadium chloroperoxidase Authors: Messerschmidt, A, Macedo-Ribeiro, S. Deposit date: 2007-11-09 Release date: 2008-02-12 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Crystal structure of a trapped phosphate intermediate in vanadium apochloroperoxidase catalyzing a dephosphorylation reaction Biochemistry, 47, 2008
3HIJ	Crystal structure of dihydrodipicolinate synthase from Bacillus anthracis in complex with its substrate, pyruvate Descriptor: Dihydrodipicolinate synthase, GLYCEROL, SODIUM ION Authors: Voss, J.E, Scally, S.W, Dobson, R.C.J, Perugini, M.A. Deposit date: 2009-05-20 Release date: 2009-11-24 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Substrate-mediated Stabilization of a Tetrameric Drug Target Reveals Achilles Heel in Anthrax. J.Biol.Chem., 285, 2010
3M2A	Crystallographic and Single Crystal Spectral Analysis of the Peroxidase Ferryl Intermediate Descriptor: Cytochrome c peroxidase, mitochondrial, PHOSPHATE ION, ... Authors: Meharenna, Y.T, Poulos, T.L. Deposit date: 2010-03-06 Release date: 2010-05-12 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Crystallographic and single-crystal spectral analysis of the peroxidase ferryl intermediate. Biochemistry, 49, 2010
3M25	Crystallographic and Single Crystal Spectral Analysis of the Peroxidase Ferryl Intermediate Descriptor: Cytochrome c peroxidase, mitochondrial, PHOSPHATE ION, ... Authors: Meharenna, Y.T, Poulos, T.L. Deposit date: 2010-03-06 Release date: 2010-05-12 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Crystallographic and single-crystal spectral analysis of the peroxidase ferryl intermediate. Biochemistry, 49, 2010
3M2F	Crystallographic and Single Crystal Spectral Analysis of the Peroxidase Ferryl Intermediate Descriptor: Cytochrome c peroxidase, mitochondrial, PHOSPHATE ION, ... Authors: Meharenna, Y.T, Poulos, T.L. Deposit date: 2010-03-07 Release date: 2010-05-12 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Crystallographic and single-crystal spectral analysis of the peroxidase ferryl intermediate. Biochemistry, 49, 2010
3M23	Crystallographic and Single Crystal Spectral Analysis of the Peroxidase Ferryl Intermediate Descriptor: Cytochrome c peroxidase, mitochondrial, PHOSPHATE ION, ... Authors: Meharenna, Y.T, Poulos, T.L. Deposit date: 2010-03-06 Release date: 2010-05-12 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Crystallographic and single-crystal spectral analysis of the peroxidase ferryl intermediate. Biochemistry, 49, 2010
3M2G	Crystallographic and Single Crystal Spectral Analysis of the Peroxidase Ferryl Intermediate Descriptor: Cytochrome c peroxidase, mitochondrial, PHOSPHATE ION, ... Authors: Meharenna, Y.T, Poulos, T.L. Deposit date: 2010-03-07 Release date: 2010-05-12 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Crystallographic and single-crystal spectral analysis of the peroxidase ferryl intermediate. Biochemistry, 49, 2010
6ES4	A cryptic RNA-binding domain mediates Syncrip recognition and exosomal partitioning of miRNA targets Descriptor: 1,2-ETHANEDIOL, SULFATE ION, Syncrip, ... Authors: Hobor, F, Dallmann, A, Ball, N.J, Cicchini, C, Battistelli, C, Ogrodowicz, R.W, Christodoulou, E, Martin, S.R, Castello, A, Tripodi, M, Taylor, I.A, Ramos, A. Deposit date: 2017-10-19 Release date: 2018-03-07 Method: X-RAY DIFFRACTION (2.2 Å) Cite: A cryptic RNA-binding domain mediates Syncrip recognition and exosomal partitioning of miRNA targets. Nat Commun, 9, 2018
5HGJ	Structure of integrin alpha1beta1 and alpha2beta1 I-domains explain differential calcium-mediated ligand recognition Descriptor: CALCIUM ION, CHLORIDE ION, GLYCEROL, ... Authors: Brown, K.L, Banerjee, S, Feigley, A, Abe, H, Blackwell, T, Zent, R, Pozzi, A, Hudson, B.H. Deposit date: 2016-01-08 Release date: 2017-04-12 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (1.399 Å) Cite: Salt-bridge modulates differential calcium-mediated ligand binding to integrin alpha 1- and alpha 2-I domains. Sci Rep, 8, 2018
1DIE	OBSERVATIONS OF REACTION INTERMEDIATES AND THE MECHANISM OF ALDOSE-KETOSE INTERCONVERSION BY D-XYLOSE ISOMERASE Descriptor: 1-DEOXYNOJIRIMYCIN, D-XYLOSE ISOMERASE, MAGNESIUM ION Authors: Collyer, C.A, Viehmann, H, Goldberg, J.D, Blow, D.M. Deposit date: 1992-06-04 Release date: 1993-07-15 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Observations of reaction intermediates and the mechanism of aldose-ketose interconversion by D-xylose isomerase. Proc.Natl.Acad.Sci.USA, 87, 1990
1DID	OBSERVATIONS OF REACTION INTERMEDIATES AND THE MECHANISM OF ALDOSE-KETOSE INTERCONVERSION BY D-XYLOSE ISOMERASE Descriptor: 2,5-DIDEOXY-2,5-IMINO-D-GLUCITOL, D-XYLOSE ISOMERASE, MANGANESE (II) ION Authors: Collyer, C.A, Goldberg, J.D, Blow, D.M. Deposit date: 1992-06-04 Release date: 1993-07-15 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Observations of reaction intermediates and the mechanism of aldose-ketose interconversion by D-xylose isomerase. Proc.Natl.Acad.Sci.USA, 87, 1990
6E2P	Structure of human JAK2 FERM/SH2 in complex with Leptin Receptor Descriptor: Leptin receptor, SULFATE ION, Tyrosine-protein kinase JAK2 Authors: Ferrao, R, Lupardus, P.J, Wallweber, H.J.A. Deposit date: 2018-07-11 Release date: 2018-08-08 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2.83 Å) Cite: Receptor-mediated dimerization of JAK2 FERM domains is required for JAK2 activation. Elife, 7, 2018
4UOV	The structure of a tetrameric alpha-carbonic anhydrase from Thermovibrio ammonificans reveals a core formed around intermolecular disulfides, which contribute to its thermostability. Descriptor: 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, ... Authors: James, P, Isupov, M, Sayer, C, Berg, S, Lioliou, M, Kotlar, H, Littlechild, J. Deposit date: 2014-06-10 Release date: 2014-10-15 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.85 Å) Cite: The Structure of a Tetrameric [Alpha]-Carbonic Anhydrase from Thermovibrio Ammonificans Reveals a Core Formed Around Intermolecular Disulfides that Contribute to its Thermostability Acta Crystallogr.,Sect.D, 70, 2014
7A9G	Truncated 1-deoxy-D-xylulose 5-phosphate synthase (DXS) from Mycobacterium tuberculosis with intermediate 2-acetyl-thiamine diphosphate Descriptor: 1-deoxy-D-xylulose-5-phosphate synthase,1-deoxy-D-xylulose-5-phosphate synthase, 2-ACETYL-THIAMINE DIPHOSPHATE, DI(HYDROXYETHYL)ETHER, ... Authors: Gierse, R.M, Reddem, E, Grooves, M.R. Deposit date: 2020-09-02 Release date: 2022-03-23 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.9 Å) Cite: First crystal structures of 1-deoxy-D-xylulose 5-phosphate synthase (DXPS) from Mycobacterium tuberculosis indicate a distinct mechanism of intermediate stabilization. Sci Rep, 12, 2022
7QO8	Structure of Protease1 from Pyrococcus horikoshii in space group 19 with a hexamer in the asymmetric unit Descriptor: Deglycase PH1704, SULFATE ION Authors: Engilberge, S, Gabel, F, Girard, E. Deposit date: 2021-12-23 Release date: 2022-03-30 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Medical contrast agents as promising tools for biomacromolecular SAXS experiments. Acta Crystallogr D Struct Biol, 78, 2022
6V2E	Crystal structure of the human CLR:RAMP2 extracellular domain heterodimer with bound high-affinity adrenomedullin S45R/K46L/S48G/Q50W variant Descriptor: ADM, AMINO GROUP, FORMIC ACID, ... Authors: Booe, J.M, Pioszak, A.A. Deposit date: 2019-11-22 Release date: 2020-08-05 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.83 Å) Cite: Picomolar Affinity Antagonist and Sustained Signaling Agonist Peptide Ligands for the Adrenomedullin and Calcitonin Gene-Related Peptide Receptors. Acs Pharmacol Transl Sci, 3, 2020
6F4Z	2'F-araG modified quadruplex with flipped G-tract and central tetrad Descriptor: DNA (5'-D(*GP*GP*GP*AP*TP*GP*GP*GP*AP*CP*AP*CP*AP*GP*(GFL)P*GP*GP*AP*CP*GP*GP*G)-3') Authors: Dickerhoff, J, Weisz, K. Deposit date: 2017-11-30 Release date: 2018-04-25 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Fluorine-Mediated Editing of a G-Quadruplex Folding Pathway. Chembiochem, 19, 2018
3UXL	P. putida mandelate racemase co-crystallized with the intermediate analogue cupferron Descriptor: 1-hydroxy-2-oxo-1-phenylhydrazine, MAGNESIUM ION, Mandelate racemase Authors: Lietzan, A.D, Pellmann, E, St Maurice, M. Deposit date: 2011-12-05 Release date: 2012-02-08 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.201 Å) Cite: Structure of mandelate racemase with bound intermediate analogues benzohydroxamate and cupferron. Biochemistry, 51, 2012
3OFS	Dynamic conformations of the CD38-mediated NAD cyclization captured using multi-copy crystallography Descriptor: ADP-ribosyl cyclase 1, [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl [(2R,3R,4R)-4-fluoro-3-hydroxytetrahydrofuran-2-yl]methyl dihydrogen diphosphate Authors: Zhang, H, Lee, H.C, Hao, Q. Deposit date: 2010-08-16 Release date: 2010-12-15 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Dynamic Conformations of the CD38-Mediated NAD Cyclization Captured in a Single Crystal J.Mol.Biol., 405, 2011
1NSP	MECHANISM OF PHOSPHATE TRANSFER BY NUCLEOSIDE DIPHOSPHATE KINASE: X-RAY STRUCTURES OF A PHOSPHO-HISTIDINE INTERMEDIATE OF THE ENZYMES FROM DROSOPHILA AND DICTYOSTELIUM Descriptor: NUCLEOSIDE DIPHOSPHATE KINASE Authors: Janin, J, Morera, S, Chiadmi, M, Lebras, G, Lascu, I. Deposit date: 1995-04-18 Release date: 1995-07-10 Last modified: 2024-06-05 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Mechanism of phosphate transfer by nucleoside diphosphate kinase: X-ray structures of the phosphohistidine intermediate of the enzymes from Drosophila and Dictyostelium. Biochemistry, 34, 1995
1XSK	Structure of a Family 31 alpha glycosidase glycosyl-enzyme intermediate Descriptor: 3[N-MORPHOLINO]PROPANE SULFONIC ACID, 5(R)-fluoro-beta-D-xylopyranose, Putative family 31 glucosidase yicI, ... Authors: Lovering, A.L, Lee, S.S, Kim, Y.W, Withers, S.G, Strynadka, N.C. Deposit date: 2004-10-19 Release date: 2004-11-10 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Mechanistic and Structural Analysis of a Family 31 {alpha}-Glycosidase and Its Glycosyl-enzyme Intermediate J.Biol.Chem., 280, 2005

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