Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7ZLM
DownloadVisualize
BU of 7zlm by Molmil
Crystal structure of SOCS2:ElonginB:ElonginC in complex with compound MN551
Descriptor: Elongin-B, Elongin-C, Suppressor of cytokine signaling 2, ...
Authors:Ramachandran, S, Ciulli, A, Makukhin, N.
Deposit date:2022-04-15
Release date:2023-04-26
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Structure-based design of a phosphotyrosine-masked covalent ligand targeting the E3 ligase SOCS2.
Nat Commun, 14, 2023
8A11
DownloadVisualize
BU of 8a11 by Molmil
Cryo-EM structure of the Human SHMT1-RNA complex
Descriptor: PYRIDOXAL-5'-PHOSPHATE, Serine hydroxymethyltransferase, cytosolic
Authors:Spizzichino, S, Marabelli, C, Bharadwaj, A, Jakobi, A.J, Chaves-Sanjuan, A, Giardina, G, Bolognesi, M, Cutruzzola, F.
Deposit date:2022-05-30
Release date:2023-06-14
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.52 Å)
Cite:Structure-based mechanism of riboregulation of the metabolic enzyme SHMT1.
Mol.Cell, 2024
5T35
DownloadVisualize
BU of 5t35 by Molmil
The PROTAC MZ1 in complex with the second bromodomain of Brd4 and pVHL:ElonginC:ElonginB
Descriptor: (2~{S},4~{R})-1-[(2~{S})-2-[2-[2-[2-[2-[2-[(9~{S})-7-(4-chlorophenyl)-4,5,13-trimethyl-3-thia-1,8,11,12-tetrazatricyclo[8.3.0.0^{2,6}]trideca-2(6),4,7,10,12-pentaen-9-yl]ethanoylamino]ethoxy]ethoxy]ethoxy]ethanoylamino]-3,3-dimethyl-butanoyl]-~{N}-[[4-(4-methyl-2,3-dihydro-1,3-thiazol-5-yl)phenyl]methyl]-4-oxidanyl-pyrrolidine-2-carboxamide, Bromodomain-containing protein 4, Transcription elongation factor B polypeptide 1, ...
Authors:Gadd, M.S, Zengerle, M, Ciulli, A.
Deposit date:2016-08-24
Release date:2017-03-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis of PROTAC cooperative recognition for selective protein degradation.
Nat. Chem. Biol., 13, 2017
8AQ5
DownloadVisualize
BU of 8aq5 by Molmil
KRAS G12C IN COMPLEX WITH GDP AND COMPOUND 16
Descriptor: 1-[6-[4-(5-chloranyl-6-methyl-1~{H}-indazol-4-yl)-5-methyl-3-phenyl-pyrazol-1-yl]-2-azaspiro[3.3]heptan-2-yl]propan-1-one, GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Ostermann, N.
Deposit date:2022-08-11
Release date:2022-12-07
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:JDQ443, a Structurally Novel, Pyrazole-Based, Covalent Inhibitor of KRAS G12C for the Treatment of Solid Tumors.
J.Med.Chem., 65, 2022
8AQ7
DownloadVisualize
BU of 8aq7 by Molmil
KRAS G12C IN COMPLEX WITH GDP AND COMPOUND 9
Descriptor: 1-[6-[3-cyclohexyl-5-methyl-4-(5-methyl-1~{H}-indazol-4-yl)pyrazol-1-yl]-2-azaspiro[3.3]heptan-2-yl]propan-1-one, GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Ostermann, N.
Deposit date:2022-08-11
Release date:2022-12-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:JDQ443, a Structurally Novel, Pyrazole-Based, Covalent Inhibitor of KRAS G12C for the Treatment of Solid Tumors.
J.Med.Chem., 65, 2022
5UGI
DownloadVisualize
BU of 5ugi by Molmil
Crystal Structure of Ketosteroid Isomerase D38GF54A mutant from Pseudomonas Testosteroni (tKSI) bound to Equilenin
Descriptor: EQUILENIN, Steroid Delta-isomerase
Authors:Yabukarski, F, Lamba, V, Herschlag, D.
Deposit date:2017-01-08
Release date:2017-11-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:An Activator-Blocker Pair Provides a Controllable On-Off Switch for a Ketosteroid Isomerase Active Site Mutant.
J. Am. Chem. Soc., 139, 2017
6TV7
DownloadVisualize
BU of 6tv7 by Molmil
Crystal structure of rsGCaMP in the OFF state (illuminated)
Descriptor: CALCIUM ION, SODIUM ION, rsGCaMP
Authors:Janowski, R, Fuenzalida-Werner, J.P, Mishra, K, Stiel, A.C, Niessing, D.
Deposit date:2020-01-09
Release date:2021-10-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Genetically encoded photo-switchable molecular sensors for optoacoustic and super-resolution imaging.
Nat.Biotechnol., 2021
8BJ4
DownloadVisualize
BU of 8bj4 by Molmil
Crystal structure of Medicago truncatula histidinol-phosphate aminotransferase (HISN6) in apo form
Descriptor: 1,2-ETHANEDIOL, SODIUM ION, SULFATE ION, ...
Authors:Rutkiewicz, M, Witek, W, Ruszkowski, M.
Deposit date:2022-11-03
Release date:2023-03-22
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Insights into the substrate specificity, structure, and dynamics of plant histidinol-phosphate aminotransferase (HISN6).
Plant Physiol Biochem., 196, 2023
8BJ1
DownloadVisualize
BU of 8bj1 by Molmil
Crystal structure of Medicago truncatula histidinol-phosphate aminotransferase (HISN6) in the open state
Descriptor: 1,2-ETHANEDIOL, SODIUM ION, SULFATE ION, ...
Authors:Rutkiewicz, M, Ruszkowski, M.
Deposit date:2022-11-03
Release date:2023-03-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Insights into the substrate specificity, structure, and dynamics of plant histidinol-phosphate aminotransferase (HISN6).
Plant Physiol Biochem., 196, 2023
8BJ2
DownloadVisualize
BU of 8bj2 by Molmil
Crystal structure of Medicago truncatula histidinol-phosphate aminotransferase (HISN6) in the closed state
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETATE ION, SODIUM ION, ...
Authors:Rutkiewicz, M, Ruszkowski, M.
Deposit date:2022-11-03
Release date:2023-03-22
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Insights into the substrate specificity, structure, and dynamics of plant histidinol-phosphate aminotransferase (HISN6).
Plant Physiol Biochem., 196, 2023
8BJ3
DownloadVisualize
BU of 8bj3 by Molmil
Crystal structure of Medicago truncatula histidinol-phosphate aminotransferase (HISN6) in complex with histidinol-phosphate
Descriptor: 1,2-ETHANEDIOL, SODIUM ION, [(2~{S})-3-(1~{H}-imidazol-4-yl)-2-[[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylamino]propyl] dihydrogen phosphate, ...
Authors:Rutkiewicz, M, Ruszkowski, M.
Deposit date:2022-11-03
Release date:2023-03-22
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Insights into the substrate specificity, structure, and dynamics of plant histidinol-phosphate aminotransferase (HISN6).
Plant Physiol Biochem., 196, 2023
7ZU1
DownloadVisualize
BU of 7zu1 by Molmil
Crystal structure of mutant AR-LBD (V758A) bound to dihydrotestosterone
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 5-ALPHA-DIHYDROTESTOSTERONE, Androgen receptor, ...
Authors:Alegre-Marti, A, Jimenez-Panizo, A, Estebanez-Perpina, E, Fuentes-Prior, P.
Deposit date:2022-05-11
Release date:2023-03-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:A hotspot for posttranslational modifications on the androgen receptor dimer interface drives pathology and anti-androgen resistance.
Sci Adv, 9, 2023
7ZTV
DownloadVisualize
BU of 7ztv by Molmil
Crystal structure of mutant AR-LBD (F755L) bound to dihydrotestosterone
Descriptor: 1,2-ETHANEDIOL, 5-ALPHA-DIHYDROTESTOSTERONE, Androgen receptor
Authors:Alegre-Marti, A, Jimenez-Panizo, A, Estebanez-Perpina, E, Fuentes-Prior, P.
Deposit date:2022-05-11
Release date:2023-03-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:A hotspot for posttranslational modifications on the androgen receptor dimer interface drives pathology and anti-androgen resistance.
Sci Adv, 9, 2023
8VL8
DownloadVisualize
BU of 8vl8 by Molmil
Salmonella enterica Typhimurium taxis to serine and repellents (Tsr) ligand-binding domain with L-Ser, pH 7
Descriptor: CHLORIDE ION, Methyl-accepting chemotaxis protein, POTASSIUM ION, ...
Authors:Glenn, S, Baylink, A.
Deposit date:2024-01-11
Release date:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Human Serum is a Potent Chemoattractant for Enterobacteriaceae Species Associated with Gastrointestinal Bleeding
eLife, 2024
7KL7
DownloadVisualize
BU of 7kl7 by Molmil
Helicobacter pylori Xanthine-Guanine-Hypoxanthine Phosphoribosyltransferase
Descriptor: Phosphoribosyltransferase, SULFATE ION
Authors:Guddat, L.W, Keough, D.T.
Deposit date:2020-10-29
Release date:2021-05-05
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Helicobacter pylori Xanthine-Guanine-Hypoxanthine Phosphoribosyltransferase-A Putative Target for Drug Discovery against Gastrointestinal Tract Infections.
J.Med.Chem., 64, 2021
7KL6
DownloadVisualize
BU of 7kl6 by Molmil
Helicobacter pylori Xanthine-Guanine-Hypoxanthine Phosphoribosyltransferase
Descriptor: (3-{[(4-oxo-4,5-dihydro-3H-pyrrolo[3,2-d]pyrimidin-7-yl)methyl]amino}propyl)phosphonic acid, Phosphoribosyltransferase, SULFATE ION
Authors:Guddat, L.W, Keough, D.T.
Deposit date:2020-10-29
Release date:2021-05-05
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Helicobacter pylori Xanthine-Guanine-Hypoxanthine Phosphoribosyltransferase-A Putative Target for Drug Discovery against Gastrointestinal Tract Infections.
J.Med.Chem., 64, 2021
1OF2
DownloadVisualize
BU of 1of2 by Molmil
Crystal structure of HLA-B*2709 complexed with the vasoactive intestinal peptide type 1 receptor (VIPR) peptide (residues 400-408)
Descriptor: BETA-2-MICROGLOBULIN, GLYCEROL, HUMAN LYMPHOCYTE ANTIGEN HLA-B27, ...
Authors:Hulsmeyer, M, Fiorillo, M.T, Bettosini, F, Sorrentino, R, Saenger, W, Ziegler, A, Uchanska-Ziegler, B.
Deposit date:2003-04-04
Release date:2004-01-29
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Dual, Hla-B27 Subtype-Dependent Conformation of a Self-Peptide
J.Exp.Med., 199, 2004
3GTU
DownloadVisualize
BU of 3gtu by Molmil
LIGAND-FREE HETERODIMERIC HUMAN GLUTATHIONE S-TRANSFERASE M2-3 (EC 2.5.1.18), MONOCLINIC CRYSTAL FORM
Descriptor: GLUTATHIONE S-TRANSFERASE
Authors:Patskovsky, Y.V, Patskovska, L.N, Listowsky, I.
Deposit date:1998-07-29
Release date:1999-07-29
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:An asparagine-phenylalanine substitution accounts for catalytic differences between hGSTM3-3 and other human class mu glutathione S-transferases.
Biochemistry, 38, 1999
3B6S
DownloadVisualize
BU of 3b6s by Molmil
Crystal Structure of hla-b*2705 Complexed with the Citrullinated Vasoactive Intestinal Peptide Type 1 Receptor (vipr) Peptide (residues 400-408)
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, B-27 alpha chain, ...
Authors:Beltrami, A, Rossmann, M, Fiorillo, M.T, Sorrentino, R, Saenger, W, Ziegler, A, Uchanska-Ziegler, A.
Deposit date:2007-10-29
Release date:2008-07-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Citrullination-dependent Differential Presentation of a Self-peptide by HLA-B27 Subtypes.
J.Biol.Chem., 283, 2008
3BIF
DownloadVisualize
BU of 3bif by Molmil
6-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATASE EMPTY 6-PF-2K ACTIVE SITE
Descriptor: PHOSPHATE ION, PROTEIN (6-PHOSPHOFRUCTO-2-KINASE/ FRUCTOSE-2,6-BISPHOSPHATASE), SUCCINIC ACID, ...
Authors:Yuen, M.H, Hasemann, C.A.
Deposit date:1999-05-05
Release date:1999-09-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A switch in the kinase domain of rat testis 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase.
Biochemistry, 38, 1999
2XQN
DownloadVisualize
BU of 2xqn by Molmil
Complex of the 2nd and 3rd LIM domains of TES with the EVH1 DOMAIN of MENA and the N-Terminal domain of actin-like protein Arp7A
Descriptor: ACTIN-LIKE PROTEIN 7A, ENABLED HOMOLOG, TESTIN, ...
Authors:Knowles, P.P, Briggs, D.C, Murray-Rust, J, McDonald, N.Q.
Deposit date:2010-09-03
Release date:2011-01-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Molecular recognition of the Tes LIM2-3 domains by the actin-related protein Arp7A.
J. Biol. Chem., 286, 2011
6FL5
DownloadVisualize
BU of 6fl5 by Molmil
Structure of human SHMT1-H135N-R137A-E168N mutant at 3.6 Ang. resolution
Descriptor: CHLORIDE ION, PYRIDOXAL-5'-PHOSPHATE, Serine hydroxymethyltransferase, ...
Authors:Giardina, G, Cutruzzola, F, Lucchi, R.
Deposit date:2018-01-25
Release date:2018-10-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:The catalytic activity of serine hydroxymethyltransferase is essential for de novo nuclear dTMP synthesis in lung cancer cells.
FEBS J., 285, 2018
6FLL
DownloadVisualize
BU of 6fll by Molmil
SPECTROSCOPIC AND STRUCTURAL STUDY OF QW, A EGFP MUTANT SHOWING PHOTOSWITCHING PROPERTIES
Descriptor: Green fluorescent protein
Authors:Garau, G, Margheritis, E.
Deposit date:2018-01-26
Release date:2019-02-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Role of Gln222 in Photoswitching of Aequorea Fluorescent Proteins: A Twisting and H-Bonding Affair?
Acs Chem.Biol., 13, 2018
2CBM
DownloadVisualize
BU of 2cbm by Molmil
Crystal structure of the apo-form of a neocarzinostatin mutant evolved to bind testosterone.
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, NEOCARZINOSTATIN
Authors:Drevelle, A, Graille, M, Heyd, B, Sorel, I, Ulryck, N, Pecorari, F, Desmadril, M, Van Tilbeurgh, H, Minard, P.
Deposit date:2006-01-06
Release date:2006-03-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structures of in Vitro Evolved Binding Sites on Neocarzinostatin Scaffold Reveal Unanticipated Evolutionary Pathways.
J.Mol.Biol., 358, 2006
3DTX
DownloadVisualize
BU of 3dtx by Molmil
Crystal structure of HLA-B*2705 complexed with the double citrullinated vasoactive intestinal peptide type 1 receptor (VIPR) peptide (residues 400-408)
Descriptor: Beta-2-microglobulin, Double citrullinated vasoactive intestinal polypeptide receptor, MHC class I antigen (Fragment)
Authors:Beltrami, A, Gabdulkhakov, A, Rossmann, M, Ziegler, A, Uchanska-Ziegler, B, Saenger, W.
Deposit date:2008-07-16
Release date:2009-05-05
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Citrullination-and mhc polymorphism-dependent conformational changes of a self peptide
To be Published

226262

數據於2024-10-16公開中

PDB statisticsPDBj update infoContact PDBjnumon