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4UVH
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BU of 4uvh by Molmil
Discovery of pyrimidine isoxazoles InhA in complex with compound 10
Descriptor: ACETATE ION, ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADH], N-(1,3-BENZOTHIAZOL-2-YL)ACETAMIDE, ...
Authors:Read, J.A, Gingell, H, Madhavapeddi, P, Ghorpade, S, Cowan, S.
Deposit date:2014-08-05
Release date:2015-09-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Hitting the Target in More Than One Way: Novel, Direct Inhibitors of Mycobacterium Tuberculosis Enoyl Acp Reductase
To be Published
6PTR
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BU of 6ptr by Molmil
Crystal structure of a DnaN sliding clamp (DNA polymerase III subunit beta) from Bartonella birtlesii bound to griselimycin
Descriptor: 1,2-ETHANEDIOL, ACE-MVA-MP8-NZC-LEU-MP8-LEU-MVA-PRO-MLU-GLY, Beta sliding clamp, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2019-07-16
Release date:2019-08-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of a DnaN sliding clamp (DNA polymerase III subunit beta) from Bartonella birtlesii bound to griselimycin
To Be Published
8QWT
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BU of 8qwt by Molmil
Ligninolytic manganese peroxidase Cst-MnP1 from Agaricales mushrooms in complex with a manganese ion
Descriptor: CALCIUM ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Santillana, E, Romero, A.
Deposit date:2023-10-20
Release date:2024-06-26
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure-function characterization of two enzymes from novel subfamilies of manganese peroxidases secreted by the lignocellulose-degrading Agaricales fungi Agrocybe pediades and Cyathus striatus.
Biotechnol Biofuels Bioprod, 17, 2024
8EMT
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BU of 8emt by Molmil
Cryo-EM analysis of the human aldehyde oxidase from liver
Descriptor: Aldehyde oxidase, DIOXOTHIOMOLYBDENUM(VI) ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Su, C, Lyu, M, Zhang, Z, Yu, E.W.
Deposit date:2022-09-28
Release date:2023-05-10
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.92 Å)
Cite:High-resolution structural-omics of human liver enzymes.
Cell Rep, 42, 2023
4WUO
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BU of 4wuo by Molmil
Structure of the E270A Mutant Isopropylmalate dehydrogenase from Thermus thermophilus in complex with IPM, Mn and NADH
Descriptor: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, ETHANOL, ...
Authors:Pallo, A, Graczer, E, Olah, J, Szimler, T, Konarev, P.V, Svergun, D.I, Merli, A, Zavodszky, P, Vas, M, Weiss, M.S.
Deposit date:2014-11-03
Release date:2014-11-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Glutamate 270 plays an essential role in K(+)-activation and domain closure of Thermus thermophilus isopropylmalate dehydrogenase.
Febs Lett., 589, 2015
5X1I
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BU of 5x1i by Molmil
Vanillate/3-O-methylgallate O-demethylase, LigM, substrate free form
Descriptor: 1,2-ETHANEDIOL, Vanillate/3-O-methylgallate O-demethylase
Authors:Harada, A, Senda, T.
Deposit date:2017-01-26
Release date:2017-05-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The crystal structure of a new O-demethylase from Sphingobium sp. strain SYK-6
FEBS J., 284, 2017
4WHW
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BU of 4whw by Molmil
Direct photocapture of bromodomains using tropolone chemical probes
Descriptor: 1,2-ETHANEDIOL, 2-methoxy-4-{1-[2-(morpholin-4-yl)ethyl]-2-(2-phenylethyl)-1H-benzimidazol-5-yl}cyclohepta-2,4,6-trien-1-one, Bromodomain-containing protein 4
Authors:Hett, E.C, Piatnitski Chekler, E.L, Basak, A, Bonin, P.D, Denny, R.A, Flick, A.C, Geoghegan, K.F, Liu, S, Pletcher, M.T, Robinson, R.P, Sahasrabudhe, P, Salter, S, Stock, I.A, Jones, L.H.
Deposit date:2014-09-23
Release date:2015-10-28
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.345 Å)
Cite:Direct photocapture of bromodomains using tropolone chemical probes
To Be Published
8JQG
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BU of 8jqg by Molmil
Cryo EM map of full length PLC gamma 2
Descriptor: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2
Authors:Shin, Y.-C, Liao, M.
Deposit date:2023-06-14
Release date:2024-12-11
Method:ELECTRON MICROSCOPY (3.72 Å)
Cite:The crystal and cryo-EM structures of PLC gamma 2 reveal dynamic interdomain recognitions in autoinhibition.
Sci Adv, 10, 2024
6JWC
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BU of 6jwc by Molmil
Mouse antibody 2B5 Fab in complex with PEG
Descriptor: 1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE, DI(HYDROXYETHYL)ETHER, DODECAETHYLENE GLYCOL, ...
Authors:Lee, C.C, Ko, T.P, Su, Y.C, Lin, L.L, Roffler, S.R, Wang, A.H.J.
Deposit date:2019-04-19
Release date:2020-02-05
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.297 Å)
Cite:Structural basis of polyethylene glycol recognition by antibody.
J.Biomed.Sci., 27, 2020
6NZG
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BU of 6nzg by Molmil
Bacteroides uniformis beta-glucuronidase 2 covalently bound to cyclophellitol-6-carboxylate aziridine
Descriptor: (1S,2R,3S,4S,5S,6R)-2-amino-3,4,5,6-tetrahydroxycyclohexane-1-carboxylic acid, Beta-galactosidase, CALCIUM ION, ...
Authors:Pellock, S.J, Jariwala, P.B, Redinbo, M.R.
Deposit date:2019-02-13
Release date:2019-12-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Discovering the Microbial Enzymes Driving Drug Toxicity with Activity-Based Protein Profiling.
Acs Chem.Biol., 15, 2020
6O26
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BU of 6o26 by Molmil
Crystal structure of 3246 Fab in complex with circumsporozoite protein NANA
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3246 Fab heavy chain, ...
Authors:Scally, S.W, Bosch, A, Castro, K, Murugan, R, Wardemann, H, Julien, J.P.
Deposit date:2019-02-22
Release date:2020-03-04
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Evolution of protective human antibodies against Plasmodium falciparum circumsporozoite protein repeat motifs.
Nat. Med., 26, 2020
6Q3M
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BU of 6q3m by Molmil
Structure of CHD4 PHD2 - tandem chromodomains
Descriptor: 1,2-ETHANEDIOL, Chromodomain-helicase-DNA-binding protein 4, DI(HYDROXYETHYL)ETHER, ...
Authors:Alt, A, Mancini, E.J.
Deposit date:2018-12-04
Release date:2019-12-25
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Structure of histone readers
To Be Published
5MOY
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BU of 5moy by Molmil
Crystal structure of the BoNT/A2 receptor-binding domain in complex with the luminal domain of its neuronal receptor SV2C
Descriptor: 1,2-ETHANEDIOL, Botulinum neurotoxin type A, NONAETHYLENE GLYCOL, ...
Authors:Benoit, R.M, Scharer, M.A.
Deposit date:2016-12-14
Release date:2017-03-15
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.302 Å)
Cite:Crystal structure of the BoNT/A2 receptor-binding domain in complex with the luminal domain of its neuronal receptor SV2C.
Sci Rep, 7, 2017
8OFP
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BU of 8ofp by Molmil
Human adenovirus type 24 fiber-knob protein
Descriptor: Fiber
Authors:Rizkallah, P.J, Parker, A.L, Mundy, R.M, Baker, A.T.
Deposit date:2023-03-16
Release date:2023-09-20
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Broad sialic acid usage amongst species D human adenovirus.
Npj Viruses, 1, 2023
8KI5
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BU of 8ki5 by Molmil
PhmA, a type I diterpene synthase without NST/DTE motif
Descriptor: (2Z,6Z)-3,7,11-trimethyldodeca-2,6,10-trien-1-ol, PhmA
Authors:Zhang, B, Ge, H.M, Zhu, A, Zhang, Y.
Deposit date:2023-08-22
Release date:2023-10-04
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Biosynthesis of Phomactin Platelet Activating Factor Antagonist Requires a Two-Enzyme Cascade.
Angew.Chem.Int.Ed.Engl., 62, 2023
4WNW
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BU of 4wnw by Molmil
Human Cytochrome P450 2D6 Thioridazine Complex
Descriptor: 10-{2-[(2R)-1-methylpiperidin-2-yl]ethyl}-2-(methylsulfanyl)-10H-phenothiazine, Cytochrome P450 2D6, NICKEL (II) ION, ...
Authors:Wang, A, Stout, C.D, Johnson, E.F.
Deposit date:2014-10-14
Release date:2015-01-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.299 Å)
Cite:Contributions of Ionic Interactions and Protein Dynamics to Cytochrome P450 2D6 (CYP2D6) Substrate and Inhibitor Binding.
J.Biol.Chem., 290, 2015
6QKV
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BU of 6qkv by Molmil
Structure of YibK from P. aeruginosa
Descriptor: GLYCEROL, SULFATE ION, tRNA (cytidine(34)-2'-O)-methyltransferase
Authors:Mikula, K.M, Tascon, I, Iwai, H.
Deposit date:2019-01-30
Release date:2020-02-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Tying up the Loose Ends: A Mathematically Knotted Protein.
Front Chem, 9, 2021
8CMW
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BU of 8cmw by Molmil
A225L variant of the CODH/ACS complex of C. hydrogenoformans
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, CO-methylating acetyl-CoA synthase, ...
Authors:Ruickoldt, J, Jeoung, J, Lennartz, F, Dobbek, H.
Deposit date:2023-02-21
Release date:2024-03-06
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Coupling CO 2 Reduction and Acetyl-CoA Formation: The Role of a CO Capturing Tunnel in Enzymatic Catalysis.
Angew.Chem.Int.Ed.Engl., 63, 2024
5N23
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BU of 5n23 by Molmil
Protein kinase A mutants as surrogate model for Aurora B with AT9283 inhibitor
Descriptor: 1-cyclopropyl-3-{3-[5-(morpholin-4-ylmethyl)-1H-benzimidazol-2-yl]-1H-pyrazol-4-yl}urea, cAMP-dependent protein kinase catalytic subunit alpha, cAMP-dependent protein kinase inhibitor alpha
Authors:Alam, K.A, Rothweiler, U, Engh, R.A.
Deposit date:2017-02-07
Release date:2018-03-14
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.088 Å)
Cite:Inhibitor induced structural effects involving Phe327 in AGC kinases
To Be Published
6NHS
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BU of 6nhs by Molmil
Crystal Structure of the Beta Lactamase Class D YbXI from Nostoc
Descriptor: 1,2-ETHANEDIOL, Beta-lactamase, CHLORIDE ION, ...
Authors:Kim, Y, Tesar, C, Endres, M, Babnigg, G, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-12-23
Release date:2019-01-16
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of the Beta Lactamase Class D YbXI from Nostoc
To Be Published
4WJ9
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BU of 4wj9 by Molmil
Structure of Human apo ALDH1A1
Descriptor: CHLORIDE ION, Retinal dehydrogenase 1, YTTERBIUM (III) ION
Authors:Morgan, C.A, Hurley, T.D.
Deposit date:2014-09-29
Release date:2014-12-10
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Development of a high-throughput in vitro assay to identify selective inhibitors for human ALDH1A1.
Chem.Biol.Interact., 234, 2015
6VYK
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BU of 6vyk by Molmil
Cryo-EM structure of mechanosensitive channel MscS in PC-18:1 nanodiscs
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Mechanosensitive channel MscS
Authors:Zhang, Y, Daday, C, Gu, R, Cox, C.D, Martinac, B, Groot, B, Walz, T.
Deposit date:2020-02-27
Release date:2021-02-10
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Visualization of the mechanosensitive ion channel MscS under membrane tension.
Nature, 590, 2021
6QGQ
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BU of 6qgq by Molmil
Crystal structure of APT1 C2S mutant bound to palmitic acid.
Descriptor: Acyl-protein thioesterase 1, GLYCEROL, PALMITIC ACID
Authors:Audagnotto, M, Marcaida, M.J, Ho, S, Pojer, F, Van der Goot, G, Dal Peraro, M.
Deposit date:2019-01-12
Release date:2020-02-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:Palmitoylated acyl protein thioesterase APT2 deforms membranes to extract substrate acyl chains.
Nat.Chem.Biol., 2021
6O1B
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BU of 6o1b by Molmil
Crystal structure of the TIR domain G601P mutant from human SARM1, crystal form 1
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Sterile alpha and TIR motif-containing protein 1
Authors:Horsefield, S, Burdett, H, Zhang, X, Manik, M.K, Shi, Y, Chen, J, Tiancong, Q, Gilley, J, Lai, J, Gu, W, Rank, M, Casey, L, Ericsson, D.J, Foley, G, Hughes, R.O, Bosanac, T, von Itzstein, M, Rathjen, J.P, Nanson, J.D, Boden, M, Dry, I.B, Williams, S.J, Staskawicz, B.J, Coleman, M.P, Ve, T, Dodds, P.N, Kobe, B.
Deposit date:2019-02-18
Release date:2019-09-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:NAD+cleavage activity by animal and plant TIR domains in cell death pathways.
Science, 365, 2019
6O3V
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BU of 6o3v by Molmil
Crystal structure for RVA-VP3
Descriptor: 1,2-ETHANEDIOL, GUANOSINE-5'-MONOPHOSPHATE, Protein VP3, ...
Authors:Kumar, D, Yu, X, Wang, Z, Hu, L, Prasad, V.
Deposit date:2019-02-27
Release date:2020-03-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:2.7 angstrom cryo-EM structure of rotavirus core protein VP3, a unique capping machine with a helicase activity.
Sci Adv, 6, 2020

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數據於2025-10-15公開中

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