PDB: 72308 resultsInfo pagesStatus searchChemie searchBIRD

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5EV2	Structure II of Intact U2AF65 Recognizing the 3' Splice Site Signal Descriptor: 1,4-DIETHYLENE DIOXIDE, DI(HYDROXYETHYL)ETHER, DNA (5'-R(P*UP*U)-D(P*UP*U)-R(P*U)-D(P*UP*(BRU)P*U)-3'), ... Authors: Agrawal, A.A, Jenkins, J.L, Kielkopf, C.L. Deposit date: 2015-11-19 Release date: 2016-02-24 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (1.86 Å) Cite: An extended U2AF(65)-RNA-binding domain recognizes the 3' splice site signal. Nat Commun, 7, 2016
1P9K	THE SOLUTION STRUCTURE OF YBCJ FROM E. COLI REVEALS A RECENTLY DISCOVERED ALFAL MOTIF INVOLVED IN RNA-BINDING Descriptor: orf, hypothetical protein Authors: Volpon, L, Lievre, C, Osborne, M.J, Gandhi, S, Iannuzzi, P, Larocque, R, Matte, A, Cygler, M, Gehring, K, Ekiel, I, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI) Deposit date: 2003-05-12 Release date: 2003-11-25 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: The solution structure of YbcJ from Escherichia coli reveals a recently discovered alphaL motif involved in RNA binding. J.Bacteriol., 185, 2003
6TUT	Cryo-EM structure of the RNA Polymerase III-Maf1 complex Descriptor: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ... Authors: Vorlaender, M.K, Hagen, W.J.H, Mueller, C.W. Deposit date: 2020-01-08 Release date: 2020-02-19 Last modified: 2024-05-22 Method: ELECTRON MICROSCOPY (3.25 Å) Cite: Structural basis for RNA polymerase III transcription repression by Maf1. Nat.Struct.Mol.Biol., 27, 2020
7W0B	Dicer2-LoqsPD complex at apo status Descriptor: Dicer-2, isoform A, Loquacious, ... Authors: Su, S, Wang, J, Wang, H.W, Ma, J. Deposit date: 2021-11-18 Release date: 2022-04-27 Last modified: 2024-06-26 Method: ELECTRON MICROSCOPY (3.33 Å) Cite: Structural insights into dsRNA processing by Drosophila Dicer-2-Loqs-PD. Nature, 607, 2022
6HYS	Crystal structure of DHX8 helicase domain bound to ADP at 2.6 angstrom Descriptor: 1,2-ETHANEDIOL, ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, ... Authors: Felisberto-Rodrigues, C, Thomas, J.C, McAndrew, P.C, Le Bihan, Y.V, Burke, R, Workman, P, van Montfort, R.L.M. Deposit date: 2018-10-22 Release date: 2019-08-28 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Structural and functional characterisation of human RNA helicase DHX8 provides insights into the mechanism of RNA-stimulated ADP release. Biochem.J., 476, 2019
6OPF	Crystal structure of dmNxf2 UBA domain fused with Panoramix helix Descriptor: Nuclear RNA export factor 2, Panoramix fusion Authors: Wang, J, Patel, D.J. Deposit date: 2019-04-24 Release date: 2019-07-03 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2 Å) Cite: The nascent RNA binding complex SFiNX licenses piRNA-guided heterochromatin formation. Nat.Struct.Mol.Biol., 26, 2019
5KVJ	Crystal structure of the 16-mer doublestranded RNA. Northeast Structural Genomics Consortium (NESG) target RNA1 Descriptor: ARGININE, RNA (5'-R(P*CP*CP*AP*UP*CP*CP*UP*CP*UP*AP*CP*AP*GP*GP*CP*G)-3'), RNA (5'-R(P*CP*GP*CP*CP*UP*GP*UP*AP*GP*AP*GP*GP*AP*UP*GP*G)-3') Authors: Vorobiev, S.M, Ma, L.-C, Montelione, G.T, Northeast Structural Genomics Consortium (NESG) Deposit date: 2016-07-14 Release date: 2016-08-03 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.261 Å) Cite: Crystal structure of the 16-mer double stranded RNA. To be published
8FPJ	Co-structure of the Human Metapneunomovirus RNA-dependent RNA polymerase with MRK-1 Descriptor: 4-(2-aminopropan-2-yl)-N'-[4-(cyclopropyloxy)-3-methoxybenzoyl]-6-(4-fluorophenyl)pyridine-2-carbohydrazide, Phosphoprotein, RNA-directed RNA polymerase L Authors: Fischmann, T.O. Deposit date: 2023-01-04 Release date: 2023-06-14 Last modified: 2024-06-19 Method: ELECTRON MICROSCOPY (2.74 Å) Cite: Conserved allosteric inhibitory site on the respiratory syncytial virus and human metapneumovirus RNA-dependent RNA polymerases. Commun Biol, 6, 2023
6HYT	Crystal structure of DHX8 helicase domain bound to ADP at 2.3 Angstrom Descriptor: 1,2-ETHANEDIOL, ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, ... Authors: Felisberto-Rodrigues, C, Thomas, J.C, McAndrew, P.C, Le Bihan, Y.V, Burke, R, Workman, P, van Montfort, R.L.M. Deposit date: 2018-10-22 Release date: 2019-08-28 Last modified: 2024-05-15 Method: X-RAY DIFFRACTION (2.33 Å) Cite: Structural and functional characterisation of human RNA helicase DHX8 provides insights into the mechanism of RNA-stimulated ADP release. Biochem.J., 476, 2019
5WSG	Cryo-EM structure of the Catalytic Step II spliceosome (C* complex) at 4.0 angstrom resolution Descriptor: 3'-exon-intron, 3'-intron-lariat, 5'-exon, ... Authors: Yan, C, Wan, R, Bai, R, Huang, G, Shi, Y. Deposit date: 2016-12-07 Release date: 2017-01-25 Last modified: 2024-03-20 Method: ELECTRON MICROSCOPY (4 Å) Cite: Structure of a yeast step II catalytically activated spliceosome Science, 355, 2017
7VKL	Crystal structure of MmIMP3-KH12 in complex with zipcode RNA Descriptor: Insulin-like growth factor 2 mRNA-binding protein 3, RNA (8-mer) Authors: Li, X.J, Wu, B.X. Deposit date: 2021-09-30 Release date: 2022-10-05 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Crystal structure of MmIMP3-KH12 in complex with zipcode RNA To Be Published
7VSJ	Crystal structure of MmIMP3-RRM12 in complex with 9-mer RNA Descriptor: Insulin-like growth factor 2 mRNA-binding protein 3, RNA (9-mer) Authors: Li, X.J, Wu, B.X. Deposit date: 2021-10-26 Release date: 2022-11-02 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.38 Å) Cite: Crystal structure of MmIMP3-RRM12 in complex with 9-mer RNA To Be Published
8SQJ	SARS-CoV-2 replication-transcription complex bound to RNA-nsp9, as a noncatalytic RNA-nsp9 binding mode Descriptor: 5'-O-[(R)-hydroxy(thiophosphonooxy)phosphoryl]guanosine, MAGNESIUM ION, Non-structural protein 7, ... Authors: Small, G.I, Darst, S.A, Campbell, E.A. Deposit date: 2023-05-04 Release date: 2023-11-22 Method: ELECTRON MICROSCOPY (3.06 Å) Cite: Structural and functional insights into the enzymatic plasticity of the SARS-CoV-2 NiRAN domain. Mol.Cell, 83, 2023
1NMU	MBP-L30 Descriptor: 60S ribosomal protein L30, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, maltose-binding periplasmic protein Authors: Chao, J.A, Prasad, G.S, White, S.A, Stout, C.D, Williamson, J.R. Deposit date: 2003-01-10 Release date: 2003-02-18 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (2.31 Å) Cite: Inherent Protein Structural Flexibility at the RNA-binding Interface of L30e J.Mol.Biol., 326, 2003
6X7U	Crystal Structure of the Human Nudix Hydrolase Nudt16 in complex with FAD Descriptor: ADENOSINE MONOPHOSPHATE, FLAVIN-ADENINE DINUCLEOTIDE, MANGANESE (II) ION, ... Authors: Hamilton, K, Tong, L. Deposit date: 2020-05-30 Release date: 2020-07-01 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Mammalian Nudix proteins cleave nucleotide metabolite caps on RNAs. Nucleic Acids Res., 48, 2020
6VVT	Crystal structure of a Mycobacterium smegmatis transcription initiation complex with Rifampicin-resistant RNA polymerase and antibiotic Sorangicin Descriptor: 1,2-ETHANEDIOL, DNA (26-MER), DNA (31-MER), ... Authors: Lilic, M, Darst, S.A, Campbell, E.A. Deposit date: 2020-02-18 Release date: 2020-10-21 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2.901 Å) Cite: The antibiotic sorangicin A inhibits promoter DNA unwinding in a Mycobacterium tuberculosis rifampicin-resistant RNA polymerase. Proc.Natl.Acad.Sci.USA, 117, 2020
6X7V	Crystal Structure of the Human Nudix Hydrolase Nudt16 Descriptor: CHLORIDE ION, MANGANESE (II) ION, U8 snoRNA-decapping enzyme Authors: Hamilton, K, Tong, L. Deposit date: 2020-05-30 Release date: 2020-07-01 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Mammalian Nudix proteins cleave nucleotide metabolite caps on RNAs. Nucleic Acids Res., 48, 2020
6VVV	Crystal structure of a Mycobacterium smegmatis transcription initiation complex with Rifampicin-resistant RNA polymerase Descriptor: DNA (26-MER), DNA (31-MER), DNA-directed RNA polymerase subunit alpha, ... Authors: Lilic, M, Darst, S.A, Campbell, E.A. Deposit date: 2020-02-18 Release date: 2020-10-21 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (3.2 Å) Cite: The antibiotic sorangicin A inhibits promoter DNA unwinding in a Mycobacterium tuberculosis rifampicin-resistant RNA polymerase. Proc.Natl.Acad.Sci.USA, 117, 2020
6VVS	Crystal structure of a Mycobacterium smegmatis RNA polymerase transcription initiation complex with antibiotic Sorangicin Descriptor: 1,2-ETHANEDIOL, DNA (26-MER), DNA (31-MER), ... Authors: Lilic, M, Braffman, N, Darst, S.A, Campbell, E.A. Deposit date: 2020-02-18 Release date: 2020-10-21 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (3.112 Å) Cite: The antibiotic sorangicin A inhibits promoter DNA unwinding in a Mycobacterium tuberculosis rifampicin-resistant RNA polymerase. Proc.Natl.Acad.Sci.USA, 117, 2020
5MPG	Solution NMR structure of hnRNP A1 RRM1 in complex with 5'-UUAGGUC-3' RNA Descriptor: Heterogeneous nuclear ribonucleoprotein A1, RNA UUAGGUC Authors: Barraud, P, Allain, F.H.-T. Deposit date: 2016-12-16 Release date: 2017-07-05 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Tandem hnRNP A1 RNA recognition motifs act in concert to repress the splicing of survival motor neuron exon 7. Elife, 6, 2017
7SOT	LaM domain of human LARP1 in complex with AAAAAA oligonucleotide Descriptor: Isoform 2 of La-related protein 1, RNA (5'-R(P*AP*AP*AP*AP*AP*A)-3'), SULFATE ION Authors: Kozlov, G, Gehring, K. Deposit date: 2021-11-01 Release date: 2022-08-03 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.52 Å) Cite: Structural basis of 3'-end poly(A) RNA recognition by LARP1. Nucleic Acids Res., 50, 2022
7SOU	LaM domain of human LARP1 in complex with AAAAAA polynucleotide Descriptor: Isoform 2 of La-related protein 1, RNA (5'-R(P*AP*AP*AP*AP*AP*A)-3') Authors: Kozlov, G, Gehring, K. Deposit date: 2021-11-01 Release date: 2022-08-03 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.45 Å) Cite: Structural basis of 3'-end poly(A) RNA recognition by LARP1. Nucleic Acids Res., 50, 2022
3U4M	Crystal structure of ribosomal protein tthl1 in complex with 80nt 23s rna from thermus thermophilus Descriptor: 50S ribosomal protein L1, CHLORIDE ION, MAGNESIUM ION, ... Authors: Gabdulkhakov, A.G, Nevskaya, N.A, NIkonov, S.V. Deposit date: 2011-10-10 Release date: 2012-08-08 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2 Å) Cite: High-resolution crystal structure of the isolated ribosomal L1 stalk. Acta Crystallogr.,Sect.D, 68, 2012
7YEY	Structure of MmIGF2BP3-KH12 in complex with 8-mer RNA Descriptor: Insulin-like growth factor 2 mRNA-binding protein 3, RNA (5'-R(*CP*AP*CP*GP*GP*CP*AP*C)-3') Authors: Li, X.J, Wu, B.X. Deposit date: 2022-07-06 Release date: 2023-07-12 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Structure of MmIGF2BP3-KH12 in complex with 8-mer RNA To Be Published
7YEX	Structure of MmIGF2BP3 in complex with 8-mer RNA Descriptor: Insulin-like growth factor 2 mRNA-binding protein 3, RNA (5'-R(P*CP*AP*CP*AP*CP*AP*CP*A)-3') Authors: Li, X.J, Wu, B.X. Deposit date: 2022-07-06 Release date: 2023-07-12 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2 Å) Cite: Structure of MmIGF2BP3 in complex with 8-mer RNA To Be Published

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