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5OOM
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BU of 5oom by Molmil
Structure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNA
Descriptor: 16S ribosomal RNA, 39S ribosomal protein L10, mitochondrial, ...
Authors:Brown, A, Rathore, S, Kimanius, D, Aibara, S, Bai, X.C, Rorbach, J, Amunts, A, Ramakrishnan, V.
Deposit date:2017-08-08
Release date:2017-09-13
Last modified:2023-03-15
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:Structures of the human mitochondrial ribosome in native states of assembly.
Nat. Struct. Mol. Biol., 24, 2017
6TPQ
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BU of 6tpq by Molmil
RNase M5 bound to 50S ribosome with precursor 5S rRNA
Descriptor: 50S ribosomal protein L10, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
Authors:Oerum, S, Dendooven, T, Gilet, L, Catala, M, Degut, C, Trinquier, A, Barraud, P, Luisi, B, Condon, C, Tisne, C.
Deposit date:2019-12-13
Release date:2020-09-30
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.07 Å)
Cite:Structures of B. subtilis Maturation RNases Captured on 50S Ribosome with Pre-rRNAs.
Mol.Cell, 80, 2020
6KI7
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BU of 6ki7 by Molmil
Pyrophosphatase mutant K30R from Acinetobacter baumannii
Descriptor: Inorganic pyrophosphatase
Authors:Su, J.
Deposit date:2019-07-17
Release date:2019-10-02
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal Structures of Pyrophosphatase from Acinetobacter baumannii: Snapshots of Pyrophosphate Binding and Identification of a Phosphorylated Enzyme Intermediate.
Int J Mol Sci, 20, 2019
5AHJ
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BU of 5ahj by Molmil
Yeast 20S proteasome in complex with Macyranone A
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 20S PROTEASOME, CHLORIDE ION, ...
Authors:Etzbach, L, Plaza, A, Dubiella, C, Groll, M, Kaiser, M, Mueller, R.
Deposit date:2015-02-06
Release date:2015-02-18
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Macyranones: Structure, Biosynthesis, and Binding Mode of an Unprecedented Epoxyketone that Targets the 20S Proteasome.
J.Am.Chem.Soc., 137, 2015
5F0V
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BU of 5f0v by Molmil
X-ray crystal structure of a thiolase from Escherichia coli at 1.8 A resolution
Descriptor: 1,2-ETHANEDIOL, Acetyl-CoA acetyltransferase
Authors:Ithayaraja, M, Neelanjana, J, Wierenga, R, Savithri, H.S, Murthy, M.R.N.
Deposit date:2015-11-28
Release date:2016-07-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of a thiolase from Escherichia coli at 1.8 angstrom resolution.
Acta Crystallogr.,Sect.F, 72, 2016
6JXI
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BU of 6jxi by Molmil
Rb+-bound E2-MgF state of the gastric proton pump (Tyr799Trp)
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ...
Authors:Abe, K, Irie, K.
Deposit date:2019-04-23
Release date:2019-08-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A single K + -binding site in the crystal structure of the gastric proton pump.
Elife, 8, 2019
6TRC
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BU of 6trc by Molmil
Cryo- EM structure of the Thermosynechococcus elongatus photosystem I in the presence of cytochrome c6
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ...
Authors:Koelsch, A, Radon, C, Baumert, A, Buerger, J, Mielke, T, Lisdat, F, Zouni, A, Wendler, P.
Deposit date:2019-12-18
Release date:2020-09-16
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:Current limits of structural biology: The transient interaction between cytochrome c6 and photosystem I
Curr.Opin.Struct.Biol., 2, 2020
5F2W
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BU of 5f2w by Molmil
Crystal structure of human KDM4A in complex with compound 16
Descriptor: 1,2-ETHANEDIOL, 2-(2-azanyl-1,3-thiazol-4-yl)pyridine-4-carboxamide, DIMETHYL SULFOXIDE, ...
Authors:Le Bihan, Y.-V, Dempster, S, Westwood, I.M, van Montfort, R.L.M.
Deposit date:2015-12-02
Release date:2016-01-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:8-Substituted Pyrido[3,4-d]pyrimidin-4(3H)-one Derivatives As Potent, Cell Permeable, KDM4 (JMJD2) and KDM5 (JARID1) Histone Lysine Demethylase Inhibitors.
J.Med.Chem., 59, 2016
5AKA
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BU of 5aka by Molmil
EM structure of ribosome-SRP-FtsY complex in closed state
Descriptor: 23S ribosomal RNA, 4.5S ribosomal RNA, 50S RIBOSOMAL PROTEIN L11, ...
Authors:von Loeffelholz, O, Jiang, Q, Ariosa, A, Karuppasamy, M, Huard, K, Berger, I, Shan, S, Schaffitzel, C.
Deposit date:2015-03-03
Release date:2015-03-25
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (5.7 Å)
Cite:Ribosome-Srp-Ftsy Cotranslational Targeting Complex in the Closed State.
Proc.Natl.Acad.Sci.USA, 112, 2015
4UDI
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BU of 4udi by Molmil
Crystal structure of b-1,4-mannopyranosyl-chitobiose phosphorylase at 1.85 Angstrom from unknown human gut bacteria (Uhgb_MP)
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, PHOSPHATE ION, ...
Authors:Ladeveze, S, Cioci, G, Potocki-Veronese, G, Tranier, S, Mourey, L.
Deposit date:2014-12-10
Release date:2015-05-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Bases for N-Glycan Processing by Mannoside Phosphorylase.
Acta Crystallogr.,Sect.D, 71, 2015
6TUG
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BU of 6tug by Molmil
Enterococcus italicus Csm6 bound to cyclic hexa-2'-fluoro-hexa-dAMP
Descriptor: 2'-deoxy-2'-fluoroadenosine 5'-(dihydrogen phosphate), CRISPR system endoribonuclease Csm6, SULFATE ION
Authors:Garcia-Doval, C, Jinek, M.
Deposit date:2020-01-07
Release date:2020-02-26
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Activation and self-inactivation mechanisms of the cyclic oligoadenylate-dependent CRISPR ribonuclease Csm6.
Nat Commun, 11, 2020
4UEW
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BU of 4uew by Molmil
Structure of H2-treated anaerobically purified D. fructosovorans NiFe- hydrogenase
Descriptor: CARBONMONOXIDE-(DICYANO) IRON, FE3-S4 CLUSTER, GLYCEROL, ...
Authors:Volbeda, A, Martin, L, Liebgott, P.-P, Fontecilla-Camps, J.C.
Deposit date:2014-12-20
Release date:2015-03-25
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:[NiFe]-hydrogenases revisited: nickel-carboxamido bond formation in a variant with accrued O2-tolerance and a tentative re-interpretation of Ni-SI states.
Metallomics, 7, 2015
6K1I
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BU of 6k1i by Molmil
Human nucleosome core particle with gammaH2A.X variant
Descriptor: CHLORIDE ION, DNA (147-MER), Histone H2AX, ...
Authors:Sharma, D, De Falco, L, Davey, C.A.
Deposit date:2019-05-10
Release date:2020-01-15
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:PARP1 exhibits enhanced association and catalytic efficiency with gamma H2A.X-nucleosome.
Nat Commun, 10, 2019
1NMW
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BU of 1nmw by Molmil
Solution structure of the PPIase domain of human Pin1
Descriptor: Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1, SULFATE ION
Authors:Bayer, E, Goettsch, S, Mueller, J.W, Griewel, B, Guiberman, E, Mayr, L, Bayer, P.
Deposit date:2003-01-12
Release date:2003-07-15
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural Analysis of the Mitotic Regulator hPin1 in Solution: INSIGHTS INTO DOMAIN ARCHITECTURE AND SUBSTRATE BINDING.
J.Biol.Chem., 278, 2003
4UNB
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BU of 4unb by Molmil
THE CRYSTAL STRUCTURE OF I-DMOI IN COMPLEX WITH ITS TARGET DNA AT 6 DAYS INCUBATION IN 5MM MN (STATE 5)
Descriptor: 5'-D(*CP*CP*GP*GP*CP*AP*AP*GP*GP*C)-3', 5'-D(*CP*GP*CP*GP*CP*CP*GP*GP*AP*AP*CP*TP*TP*AP*C)-3', 5'-D(*GP*CP*CP*TP*TP*GP*CP*CP*GP*GP*GP*TP*AP*A)-3', ...
Authors:Molina, R, Stella, S, Redondo, P, Gomez, H, Marcaida, M.J, Orozco, M, Prieto, J, Montoya, G.
Deposit date:2014-05-26
Release date:2014-12-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Visualizing Phosphodiester-Bond Hydrolysis by an Endonuclease.
Nat.Struct.Mol.Biol., 22, 2015
5DAT
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BU of 5dat by Molmil
Complex of yeast 80S ribosome with hypusine-containing eIF5A
Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
Authors:Melnikov, S, Mailliot, J, Shin, B.-S, Rigger, L, Yusupova, G, Micura, R, Dever, T.E, Yusupov, M.
Deposit date:2015-08-20
Release date:2016-08-31
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome
To Be Published
5IM4
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BU of 5im4 by Molmil
Crystal structure of designed two-component self-assembling icosahedral cage I52-32
Descriptor: 6,7-dimethyl-8-ribityllumazine synthase, Phosphotransferase system, mannose/fructose-specific component IIA
Authors:Liu, Y.A, Cascio, D, Sawaya, M.R, Bale, J.B, Collazo, M.J, Thomas, C, Sheffler, W, King, N.P, Baker, D, Yeates, T.O.
Deposit date:2016-03-05
Release date:2016-07-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Accurate design of megadalton-scale two-component icosahedral protein complexes.
Science, 353, 2016
6K33
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BU of 6k33 by Molmil
Structure of PSI-isiA supercomplex from Thermosynechococcus vulcanus
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ...
Authors:Akita, F, Nagao, R, Kato, K, Shen, J.R, Miyazaki, N.
Deposit date:2019-05-16
Release date:2020-05-20
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (2.74 Å)
Cite:Structure of a cyanobacterial photosystem I surrounded by octadecameric IsiA antenna proteins.
Commun Biol, 3, 2020
6CAO
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BU of 6cao by Molmil
Structure of the ribosomal decoding complex at ambient temperature
Descriptor: 16S Ribosomal RNA rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:DeMirci, H.
Deposit date:2018-01-31
Release date:2018-07-25
Last modified:2019-04-17
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:Structure of the 30S ribosomal decoding complex at ambient temperature.
RNA, 24, 2018
5A8R
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BU of 5a8r by Molmil
METHYL-COENZYME M REDUCTASE II FROM METHANOTHERMOBACTER MARBURGENSIS AT 2.15 A RESOLUTION
Descriptor: 1-THIOETHANESULFONIC ACID, Coenzyme B, FACTOR 430, ...
Authors:Wagner, T, Ermler, U.
Deposit date:2015-07-16
Release date:2016-08-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Didehydroaspartate Modification in Methyl-Coenzyme M Reductase Catalyzing Methane Formation.
Angew.Chem.Int.Ed.Engl., 55, 2016
6TU6
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BU of 6tu6 by Molmil
Kemp Eliminase HG3.17 mutant Q50M, E47N, N300D Complexed with Transition State Analog 6-Nitrobenzotriazole
Descriptor: 6-NITROBENZOTRIAZOLE, Kemp Eliminase HG3.17 mutant Q50M, E47N, ...
Authors:Bloch, J.S, Hilvert, D.
Deposit date:2020-01-02
Release date:2020-04-01
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Contribution of Oxyanion Stabilization to Kemp Eliminase Efficiencyproficiency
Acs Catalysis, 2020
5D91
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BU of 5d91 by Molmil
Structure of a phosphatidylinositolphosphate (PIP) synthase from Renibacterium Salmoninarum
Descriptor: AF2299 protein,Phosphatidylinositol synthase, MAGNESIUM ION, Octadecane, ...
Authors:Clarke, O.B, Tomasek, D.T, Jorge, C.D, Belcher Dufrisne, M, Kim, M, Banerjee, S, Rajashankar, K.R, Hendrickson, W.A, Santos, H, Mancia, F.
Deposit date:2015-08-18
Release date:2015-11-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.501 Å)
Cite:Structural basis for phosphatidylinositol-phosphate biosynthesis.
Nat Commun, 6, 2015
5A5K
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BU of 5a5k by Molmil
AtGSTF2 from Arabidopsis thaliana in complex with camalexin
Descriptor: (2Z)-2-indol-3-ylidene-3H-1,3-thiazole, GLUTATHIONE S-TRANSFERASE F2
Authors:Ahmad, L, Rylott, E, Bruce, N.C, Edwards, R, Grogan, G.
Deposit date:2015-06-18
Release date:2016-06-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Structural evidence for Arabidopsis glutathione transferase AtGSTF2 functioning as a transporter of small organic ligands.
FEBS Open Bio, 7, 2017
6KCO
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BU of 6kco by Molmil
Shuguo PWWP in complex with ssDNA
Descriptor: DNA (5'-D(*TP*CP*CP*CP*T)-3'), LD23804p
Authors:Liu, Y.C, Huang, Y.
Deposit date:2019-06-28
Release date:2020-07-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Shuguo PWWP in complex with ssDNA
To Be Published
4Y8T
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BU of 4y8t by Molmil
Yeast 20S proteasome beta2-H116D mutant in complex with Ac-PAE-ep
Descriptor: Ac-PAE-ep, MAGNESIUM ION, Proteasome subunit alpha type-1, ...
Authors:Huber, E.M, Groll, M.
Deposit date:2015-02-16
Release date:2015-06-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Systematic Analyses of Substrate Preferences of 20S Proteasomes Using Peptidic Epoxyketone Inhibitors.
J.Am.Chem.Soc., 137, 2015

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数据于2024-11-06公开中

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