Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6SB3
DownloadVisualize
BU of 6sb3 by Molmil
CryoEM structure of murine perforin-2 ectodomain in a pre-pore form
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Macrophage-expressed gene 1 protein
Authors:Ni, T, Yu, X, Gilbert, R.J.C.
Deposit date:2019-07-18
Release date:2020-02-05
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure and mechanism of bactericidal mammalian perforin-2, an ancient agent of innate immunity.
Sci Adv, 6, 2020
6SB5
DownloadVisualize
BU of 6sb5 by Molmil
CryoEM structure of murine perforin-2 ectodomain in a pore form
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Macrophage-expressed gene 1 protein
Authors:Ni, T, Yu, X, Gilbert, R.J.C.
Deposit date:2019-07-18
Release date:2020-02-05
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (5 Å)
Cite:Structure and mechanism of bactericidal mammalian perforin-2, an ancient agent of innate immunity.
Sci Adv, 6, 2020
8A1S
DownloadVisualize
BU of 8a1s by Molmil
Structure of murine perforin-2 (Mpeg1) pore in twisted form
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Macrophage-expressed gene 1 protein
Authors:Yu, X, Ni, T, Zhang, P, Gilbert, R.
Deposit date:2022-06-02
Release date:2022-07-20
Last modified:2023-10-18
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Cryo-EM structures of perforin-2 in isolation and assembled on a membrane suggest a mechanism for pore formation.
Embo J., 41, 2022
8A1D
DownloadVisualize
BU of 8a1d by Molmil
Structure of murine perforin-2 (Mpeg1) pore in ring form
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CYCLOHEXYL-HEXYL-BETA-D-MALTOSIDE, Macrophage-expressed gene 1 protein
Authors:Yu, X, Ni, T, Zhang, P, Gilbert, R.
Deposit date:2022-06-01
Release date:2022-07-20
Last modified:2022-12-14
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Cryo-EM structures of perforin-2 in isolation and assembled on a membrane suggest a mechanism for pore formation.
Embo J., 41, 2022
6OAR
DownloadVisualize
BU of 6oar by Molmil
Structure of the Kupe virus OTU bound to the C-terminal domain of sheep ISG15
Descriptor: Interferon stimulated gene 17, RNA-dependent RNA polymerase, prop-2-en-1-amine
Authors:Dzimianski, J.V, Williams, I.L, Pegan, S.D.
Deposit date:2019-03-18
Release date:2020-01-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.063 Å)
Cite:Determining the molecular drivers of species-specific interferon-stimulated gene product 15 interactions with nairovirus ovarian tumor domain proteases.
Plos One, 14, 2019
6OAT
DownloadVisualize
BU of 6oat by Molmil
Structure of the Ganjam virus OTU bound to sheep ISG15
Descriptor: Interferon stimulated gene 17, RNA-dependent RNA polymerase, prop-2-en-1-amine
Authors:Dzimianski, J.V, Williams, I.L, Pegan, S.D.
Deposit date:2019-03-18
Release date:2020-01-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.17 Å)
Cite:Determining the molecular drivers of species-specific interferon-stimulated gene product 15 interactions with nairovirus ovarian tumor domain proteases.
Plos One, 14, 2019
6SB4
DownloadVisualize
BU of 6sb4 by Molmil
Crystal structure of murine perforin-2 P2 domain crystal form 2
Descriptor: Macrophage-expressed gene 1 protein
Authors:Ni, T, Yu, X, Ginger, L, Gilbert, R.J.C.
Deposit date:2019-07-18
Release date:2020-02-05
Last modified:2020-02-26
Method:X-RAY DIFFRACTION (3.17 Å)
Cite:Structure and mechanism of bactericidal mammalian perforin-2, an ancient agent of innate immunity.
Sci Adv, 6, 2020
2LGT
DownloadVisualize
BU of 2lgt by Molmil
Backbone 1H, 13C, and 15N Chemical Shift Assignments for QFM(Y)F
Descriptor: Eukaryotic peptide chain release factor subunit 1
Authors:Wong, L.E, Li, Y, Pillay, S, Pervushin, K.
Deposit date:2011-08-02
Release date:2012-03-14
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Selectivity of stop codon recognition in translation termination is modulated by multiple conformations of GTS loop in eRF1
Nucleic Acids Res., 2012
5A8L
DownloadVisualize
BU of 5a8l by Molmil
Human eRF1 and the hCMV nascent peptide in the translation termination complex
Descriptor: 28S RIBOSOMAL RNA, 60S RIBOSOMAL PROTEIN L12, 60S RIBOSOMAL PROTEIN L17, ...
Authors:Matheisl, S, Berninghausen, O, Becker, T, Beckmann, R.
Deposit date:2015-07-16
Release date:2015-12-02
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure of a Human Translation Termination Complex.
Nucleic Acids Res., 43, 2015
7ELK
DownloadVisualize
BU of 7elk by Molmil
Solution structure of Terfa derived from Danio rerio
Descriptor: Terfa protein
Authors:Yun, J.H, Kim, M, Lee, W.
Deposit date:2021-04-11
Release date:2022-04-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of Terfa derived from Danio rerio
To Be Published
5HU6
DownloadVisualize
BU of 5hu6 by Molmil
Structure of the T. brucei haptoglobin-haemoglobin receptor bound to human haptolgobin-haemoglobin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Haptoglobin, Haptoglobin-hemoglobin receptor, ...
Authors:Lane-Serff, H, Higgins, M.K.
Deposit date:2016-01-27
Release date:2016-03-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis for ligand and innate immunity factor uptake by the trypanosome haptoglobin-haemoglobin receptor.
Elife, 3, 2014
4X0L
DownloadVisualize
BU of 4x0l by Molmil
Human haptoglobin-haemoglobin complex
Descriptor: CACODYLATE ION, GLYCEROL, Haptoglobin, ...
Authors:Lane-Serff, H, MacGregor, P, Lowe, E.D, Carrington, M, Higgins, M.K.
Deposit date:2014-11-21
Release date:2014-12-24
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural basis for ligand and innate immunity factor uptake by the trypanosome haptoglobin-haemoglobin receptor.
Elife, 3, 2014
8U57
DownloadVisualize
BU of 8u57 by Molmil
PPARg LBD in complex with perfluorooctanoic acid (PFOA)
Descriptor: (4S,5S)-1,2-DITHIANE-4,5-DIOL, Peroxisome proliferator-activated receptor gamma, pentadecafluorooctanoic acid
Authors:Pederick, J.L, Frkic, R.L, McDougal, D.P, Bruning, J.B.
Deposit date:2023-09-12
Release date:2024-07-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:A structural basis for the activation of peroxisome proliferator-activated receptor gamma (PPAR gamma ) by perfluorooctanoic acid (PFOA).
Chemosphere, 354, 2024
7NDP
DownloadVisualize
BU of 7ndp by Molmil
X-ray structure of acetylcholine-binding protein (AChBP) in complex with FL001856.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 6-bromanylspiro[3~{H}-chromene-2,4'-piperidine]-4-one, ...
Authors:Cederfelt, D, Boronat, P, Dobritzsch, D, Hennig, S, Fitzgerald, E.A, de Esch, I.J.P, Danielson, U.H.
Deposit date:2021-02-02
Release date:2021-04-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery of fragments inducing conformational effects in dynamic proteins using a second-harmonic generation biosensor.
Rsc Adv, 11, 2021
5JDO
DownloadVisualize
BU of 5jdo by Molmil
T. congolense haptoglobin-haemoglobin receptor in complex with haemoglobin
Descriptor: Haptoglobin-haemoglobin receptor, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
Authors:Lane-Serff, H, Higgins, M.K.
Deposit date:2016-04-17
Release date:2016-04-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Evolutionary diversification of the trypanosome haptoglobin-haemoglobin receptor from an ancestral haemoglobin receptor.
Elife, 5, 2016
7AAI
DownloadVisualize
BU of 7aai by Molmil
Crystal structure of Human serum albumin in complex with perfluorooctanoic acid (PFOA) at 2.10 Angstrom Resolution
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, ...
Authors:Maso, L, Liberi, S, Trande, M, Angelini, A, Cendron, L.
Deposit date:2020-09-04
Release date:2021-02-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Unveiling the binding mode of perfluorooctanoic acid to human serum albumin.
Protein Sci., 30, 2021
5I08
DownloadVisualize
BU of 5i08 by Molmil
Prefusion structure of a human coronavirus spike protein
Descriptor: Spike glycoprotein,Foldon chimera
Authors:Kirchdoerfer, R.N, Cottrell, C.A, Wang, N, Pallesen, J, Yassine, H.M, Turner, H.L, Corbett, K.S, Graham, B.S, McLellan, J.S, Ward, A.B.
Deposit date:2016-02-03
Release date:2016-03-02
Last modified:2020-04-22
Method:ELECTRON MICROSCOPY (4.04 Å)
Cite:Pre-fusion structure of a human coronavirus spike protein.
Nature, 531, 2016
6CRV
DownloadVisualize
BU of 6crv by Molmil
SARS Spike Glycoprotein, Stabilized variant, C3 symmetry
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein,Fibritin, ...
Authors:Kirchdoerfer, R.N, Wang, N, Pallesen, J, Turner, H.L, Cottrell, C.A, McLellan, J.S, Ward, A.B.
Deposit date:2018-03-19
Release date:2018-04-11
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Stabilized coronavirus spikes are resistant to conformational changes induced by receptor recognition or proteolysis.
Sci Rep, 8, 2018
6CRZ
DownloadVisualize
BU of 6crz by Molmil
SARS Spike Glycoprotein, Trypsin-cleaved, Stabilized variant, C3 symmetry
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein,Fibritin, ...
Authors:Kirchdoerfer, R.N, Wang, N, Pallesen, J, Turner, H.L, Cottrell, C.A, McLellan, J.S, Ward, A.B.
Deposit date:2018-03-19
Release date:2018-04-11
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Stabilized coronavirus spikes are resistant to conformational changes induced by receptor recognition or proteolysis.
Sci Rep, 8, 2018
6CS0
DownloadVisualize
BU of 6cs0 by Molmil
SARS Spike Glycoprotein, Trypsin-cleaved, Stabilized variant, one S1 CTD in an upwards conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein,Fibritin, ...
Authors:Kirchdoerfer, R.N, Wang, N, Pallesen, J, Turner, H.L, Cottrell, C.A, McLellan, J.S, Ward, A.B.
Deposit date:2018-03-19
Release date:2018-04-11
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Stabilized coronavirus spikes are resistant to conformational changes induced by receptor recognition or proteolysis.
Sci Rep, 8, 2018
6CS2
DownloadVisualize
BU of 6cs2 by Molmil
SARS Spike Glycoprotein - human ACE2 complex, Stabilized variant, all ACE2-bound particles
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
Authors:Kirchdoerfer, R.N, Wang, N, Pallesen, J, Turner, H.L, Cottrell, C.A, McLellan, J.S, Ward, A.B.
Deposit date:2018-03-19
Release date:2018-04-11
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Stabilized coronavirus spikes are resistant to conformational changes induced by receptor recognition or proteolysis.
Sci Rep, 8, 2018
6GUQ
DownloadVisualize
BU of 6guq by Molmil
Crystal structure of GanP, a glucose-galactose binding protein from Geobacillus stearothermophilus, in complex with glucose
Descriptor: Putative sugar binding protein, beta-D-glucopyranose
Authors:Sherf, D, Lansky, S, Zehavi, A, Shoham, Y, Shoham, G.
Deposit date:2018-06-19
Release date:2019-07-03
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.385 Å)
Cite:The crystal structure of GanP, a glucose-galactose binding protein from Geobacillus stearothermophilus, in complex with glucose
To Be Published
6GQ0
DownloadVisualize
BU of 6gq0 by Molmil
Crystal structure of GanP, a glucose-galactose binding protein from Geobacillus stearothermophilus
Descriptor: Putative sugar binding protein
Authors:Sherf, D, Lansky, S, Zehavi, A, Shoham, Y, Shoham, G.
Deposit date:2018-06-07
Release date:2019-06-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:The crystal structure of GanP, a glucose-galactose binding protein from Gebacillus Stearothermophilus
To Be Published
4ZTG
DownloadVisualize
BU of 4ztg by Molmil
Ebola virus nucleoprotein bound to VP35 chaperoning peptide P22121
Descriptor: Polymerase cofactor VP35,Nucleoprotein fusion protein
Authors:Kirchdoerfer, R.N, Abelson, D.M, Saphire, E.O.
Deposit date:2015-05-14
Release date:2015-05-27
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Ebola virus nucleoprotein bound to VP35 chaperoning peptide P22121
to be published
4ZTI
DownloadVisualize
BU of 4zti by Molmil
Ebola virus nucleoprotein bound to VP35 chaperoning peptide P212121
Descriptor: Polymerase cofactor VP35,Nucleoprotein
Authors:Kirchdoerfer, R.N, Abelson, D.M, Saphire, E.O.
Deposit date:2015-05-14
Release date:2015-05-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Ebola virus nucleoprotein bound to VP35 chaperoning peptide P212121
to be published

224931

数据于2024-09-11公开中

PDB statisticsPDBj update infoContact PDBjnumon