Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6HRN
DownloadVisualize
BU of 6hrn by Molmil
C-Phycocyanin from heterocyst forming filamentous cyanobacterium Nostoc sp. WR13
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Alpha Subunit of Cyanobacterial Phycocyanin protein, Beta Subunit of Cyanobacterial Phycocyanin protein, ...
Authors:Patel, H.M, Roszak, A.W, Madamwar, D, Cogdell, R.J.
Deposit date:2018-09-27
Release date:2019-06-05
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.513 Å)
Cite:Crystal structure of phycocyanin from heterocyst-forming filamentous cyanobacterium Nostoc sp. WR13.
Int.J.Biol.Macromol., 135, 2019
1OLQ
DownloadVisualize
BU of 1olq by Molmil
The Trichoderma reesei cel12a P201C mutant, structure at 1.7 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ENDO-BETA-1,4-GLUCANASE
Authors:Sandgren, M, Gualfetti, P.J, Shaw, A, Gross, L.S, Saldajeno, M, Berglund, G.I, Jones, T.A, Mitchinson, C.
Deposit date:2003-08-11
Release date:2003-11-25
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Humicola Grisea Cel12A Enzyme Structure at 1.2 A Resolution and the Impact of its Free Cysteine Residues on Thermal Stability
Protein Sci., 12, 2003
6WJT
DownloadVisualize
BU of 6wjt by Molmil
2.0 Angstrom Resolution Crystal Structure of Nsp16-Nsp10 Heterodimer from SARS-CoV-2 in Complex with S-Adenosyl-L-Homocysteine
Descriptor: 2'-O-methyltransferase, FORMIC ACID, Non-structural protein 10, ...
Authors:Minasov, G, Shuvalova, L, Rosas-Lemus, M, Kiryukhina, O, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-04-14
Release date:2020-04-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:High-resolution structures of the SARS-CoV-2 2'- O -methyltransferase reveal strategies for structure-based inhibitor design.
Sci.Signal., 13, 2020
5CZW
DownloadVisualize
BU of 5czw by Molmil
Crystal structure of myroilysin
Descriptor: Myroilysin, ZINC ION
Authors:Zhou, J, Ran, T, Xu, D, Wang, W.
Deposit date:2015-08-01
Release date:2016-08-03
Last modified:2025-04-09
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Myroilysin is a New Bacterial Member of the M12A Family of Metzincin Metallopeptidases and Activated by a Cysteine-switch Mechanism
J. Biol. Chem., 292, 2017
2CB5
DownloadVisualize
BU of 2cb5 by Molmil
HUMAN BLEOMYCIN HYDROLASE, C73S/DELE455 MUTANT
Descriptor: PROTEIN (BLEOMYCIN HYDROLASE)
Authors:O'Farrell, P.A, Gonzalez, F, Zheng, W, Johnston, S.A, Joshua-Tor, L.
Deposit date:1999-03-02
Release date:2000-03-06
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of human bleomycin hydrolase, a self-compartmentalizing cysteine protease.
Structure Fold.Des., 7, 1999
1HYP
DownloadVisualize
BU of 1hyp by Molmil
CRYSTAL STRUCTURE OF HYDROPHOBIC PROTEIN FROM SOYBEAN; A MEMBER OF A NEW CYSTINE-RICH FAMILY
Descriptor: HYDROPHOBIC PROTEIN FROM SOYBEAN
Authors:Lehmann, M.S.
Deposit date:1993-02-05
Release date:1993-04-15
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of hydrophobic protein from soybean; a member of a new cysteine-rich family.
J.Mol.Biol., 231, 1993
2HE3
DownloadVisualize
BU of 2he3 by Molmil
Crystal structure of the selenocysteine to cysteine mutant of human glutathionine peroxidase 2 (GPX2)
Descriptor: CHLORIDE ION, Glutathione peroxidase 2
Authors:Johansson, C, Kavanagh, K.L, Rojkova, A, Gileadi, O, von Delft, F, Arrowsmith, C, Weigelt, J, Sundstrom, M, Edwards, A, Oppermann, U, Structural Genomics Consortium (SGC)
Deposit date:2006-06-21
Release date:2006-07-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the selenocysteine to cysteine mutant of human glutathionine peroxidase 2 (GPX2)
To be Published
9MUJ
DownloadVisualize
BU of 9muj by Molmil
RlmR 23S rRNA methyltransferase from Thermus thermophilus in complex with methylated rRNA (Um2552) and S-adenosyl-L-homocysteine (SAH)
Descriptor: 23S rRNA methyltransferase, RNA (59-MER), S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Tanouti, Y, Roovers, M, Droogmans, L, Van Elder, D, Kruys, V, Labar, G.
Deposit date:2025-01-14
Release date:2025-04-23
Last modified:2025-06-18
Method:X-RAY DIFFRACTION (2.006 Å)
Cite:Structural insight into the novel Thermus thermophilus SPOUT methyltransferase RlmR catalysing Um2552 formation in the 23S rRNA A-loop: a case of convergent evolution.
Nucleic Acids Res., 53, 2025
6WRZ
DownloadVisualize
BU of 6wrz by Molmil
Crystal Structure of Nsp16-Nsp10 Heterodimer from SARS-CoV-2 with 7-methyl-GpppA and S-adenosyl-L-homocysteine in the Active Site and Sulfates in the mRNA Binding Groove.
Descriptor: 2'-O-methyltransferase, 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, ...
Authors:Minasov, G, Shuvalova, L, Rosas-Lemus, M, Brunzelle, J.S, Kiryukhina, O, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-04-30
Release date:2020-05-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:High-resolution structures of the SARS-CoV-2 2'- O -methyltransferase reveal strategies for structure-based inhibitor design.
Sci.Signal., 13, 2020
7PSW
DownloadVisualize
BU of 7psw by Molmil
Spin labeled IPNS S55C variant in complex with Fe and ACV under anaerobic conditions
Descriptor: FE (III) ION, GLYCEROL, Isopenicillin N synthase, ...
Authors:Rabe, P, Clifton, I, Walla, C, Schofield, C.J.
Deposit date:2021-09-24
Release date:2022-07-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:Spectroscopic studies reveal details of substrate-induced conformational changes distant from the active site in isopenicillin N synthase.
J.Biol.Chem., 298, 2022
3OIN
DownloadVisualize
BU of 3oin by Molmil
Crystal structure of Saccharomyces cerevisiae Nep1/Emg1 bound to S-adenosylhomocysteine and 1 molecule of cognate RNA
Descriptor: 5'-R(*GP*GP*GP*CP*UP*UP*CP*AP*AP*CP*GP*CP*CP*C)-3', CHLORIDE ION, GLYCEROL, ...
Authors:Thomas, S.R, LaRonde-LeBlanc, N.
Deposit date:2010-08-19
Release date:2010-12-01
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural insight into the functional mechanism of Nep1/Emg1 N1-specific pseudouridine methyltransferase in ribosome biogenesis.
Nucleic Acids Res., 39, 2011
1R1O
DownloadVisualize
BU of 1r1o by Molmil
Amino Acid Sulfonamides as Transition-State Analogue Inhibitors of Arginase
Descriptor: Arginase 1, MANGANESE (II) ION, S-[2-(AMINOSULFONYL)ETHYL]-D-CYSTEINE
Authors:Cama, E, Shin, H, Christianson, D.W.
Deposit date:2003-09-24
Release date:2003-10-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Design of Amino Acid Sulfonamides as Transition-State Analogue Inhibitors of Arginase
J.Am.Chem.Soc., 125, 2003
4IP7
DownloadVisualize
BU of 4ip7 by Molmil
Structure of the S12D variant of human liver pyruvate kinase in complex with citrate and FBP.
Descriptor: 1,2-ETHANEDIOL, 1,6-di-O-phosphono-beta-D-fructofuranose, ADENOSINE, ...
Authors:Holyoak, T, Fenton, A.W.
Deposit date:2013-01-09
Release date:2013-01-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Energetic Coupling between an Oxidizable Cysteine and the Phosphorylatable N-Terminus of Human Liver Pyruvate Kinase.
Biochemistry, 52, 2013
4P5P
DownloadVisualize
BU of 4p5p by Molmil
X-ray structure of Francisella tularensis Rapid Encystment Protein 24 KDa (REP24), gene product of FTN_0841
Descriptor: ThiJ/PfpI family protein
Authors:Segelke, B.W, Feld, G.K, Corzett, M.H, Omattage, N.S, Rasley, A.
Deposit date:2014-03-19
Release date:2015-04-15
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:X-ray structure of Francisella tularensis Rapid Encystment Protein 24 KDa (REP24), gene product of FTN_0841
To Be Published
6XPC
DownloadVisualize
BU of 6xpc by Molmil
Structure of human GGT1 in complex with full GSH molecule
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, GLUTATHIONE, ...
Authors:Terzyan, S.S, Hanigan, M.
Deposit date:2020-07-08
Release date:2020-11-25
Last modified:2024-12-25
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Crystal structures of glutathione- and inhibitor-bound human GGT1: critical interactions within the cysteinylglycine binding site.
J.Biol.Chem., 296, 2020
8QMN
DownloadVisualize
BU of 8qmn by Molmil
[FeFe]-hydrogenase maturase HydE from T. maritima - dialysis experiment - empty structure
Descriptor: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, CHLORIDE ION, IRON/SULFUR CLUSTER, ...
Authors:Omeiri, J, Martin, L, Usclat, A, Cherrier, M.V, Nicolet, Y.
Deposit date:2023-09-23
Release date:2023-11-22
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Maturation of the [FeFe]-Hydrogenase: Direct Transfer of the ( kappa 3 -cysteinate)Fe II (CN)(CO) 2 Complex B from HydG to HydE.
Angew.Chem.Int.Ed.Engl., 62, 2023
8QMM
DownloadVisualize
BU of 8qmm by Molmil
M291I variant of the [FeFe]-hydrogenase maturase HydE from Thermotoga maritima
Descriptor: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, CHLORIDE ION, IRON/SULFUR CLUSTER, ...
Authors:Omeiri, J, Martin, L, Usclat, A, Cherrier, M.V, Nicolet, Y.
Deposit date:2023-09-23
Release date:2023-11-22
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Maturation of the [FeFe]-Hydrogenase: Direct Transfer of the ( kappa 3 -cysteinate)Fe II (CN)(CO) 2 Complex B from HydG to HydE.
Angew.Chem.Int.Ed.Engl., 62, 2023
8QML
DownloadVisualize
BU of 8qml by Molmil
(2R,4R)-MeTDA bound HydE structure (control experiment)
Descriptor: (2R,4R)-2-methyl-1,3-thiazolidine-2,4-dicarboxylic acid, 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, CHLORIDE ION, ...
Authors:Omeiri, J, Martin, L, Usclat, A, Cherrier, M.V, Nicolet, Y.
Deposit date:2023-09-22
Release date:2023-11-22
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Maturation of the [FeFe]-Hydrogenase: Direct Transfer of the ( kappa 3 -cysteinate)Fe II (CN)(CO) 2 Complex B from HydG to HydE.
Angew.Chem.Int.Ed.Engl., 62, 2023
6XPB
DownloadVisualize
BU of 6xpb by Molmil
Structure of human GGT1 in complex with 2-amino-4-(((1-((carboxymethyl)amino)-1-oxobutan-2-yl)oxy)(phenoxy)phosphoryl)butanoic acid (ACPB) molecule
Descriptor: 2,2-diamino-4-[(S)-({(2S)-1-[(carboxymethyl)amino]-1-oxobutan-2-yl}oxy)(hydroxy)phosphanyl]butanoic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Terzyan, S.S, Hanigan, M.H.
Deposit date:2020-07-08
Release date:2020-11-25
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Crystal structures of glutathione- and inhibitor-bound human GGT1: critical interactions within the cysteinylglycine binding site.
J.Biol.Chem., 296, 2020
6VEB
DownloadVisualize
BU of 6veb by Molmil
Precorrin-2-bound S128A S. typhimurium siroheme synthase
Descriptor: 3,3',3'',3'''-[(7S,8S,12S,13S)-3,8,13,17-tetrakis(carboxymethyl)-8,13-dimethyl-7,8,12,13,20,24-hexahydroporphyrin-2,7,1 2,18-tetrayl]tetrapropanoic acid, CHLORIDE ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Pennington, J.M, Stroupe, M.E.
Deposit date:2019-12-31
Release date:2020-03-04
Last modified:2024-12-25
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Siroheme synthase orients substrates for dehydrogenase and chelatase activities in a common active site.
Nat Commun, 11, 2020
3VVD
DownloadVisualize
BU of 3vvd by Molmil
Crystal structure of TTC0807 complexed with Ornithine
Descriptor: Amino acid ABC transporter, binding protein, L-ornithine
Authors:Tomita, T, Kanemaru, Y, Hasebe, F, Kuzuyama, T, Nishiyama, M.
Deposit date:2012-07-21
Release date:2013-06-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Two ATP-Binding Cassette Transporters Involved in (S)-2-Aminoethyl-Cysteine Uptake in Thermus thermophilus
J.Bacteriol., 195, 2013
3VVE
DownloadVisualize
BU of 3vve by Molmil
Crystal structure of TTC0807 complexed with Lysine
Descriptor: Amino acid ABC transporter, binding protein, LYSINE, ...
Authors:Tomita, T, Kanemaru, Y, Hasebe, F, Kuzuyama, T, Nishiyama, M.
Deposit date:2012-07-21
Release date:2013-06-26
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Two ATP-Binding Cassette Transporters Involved in (S)-2-Aminoethyl-Cysteine Uptake in Thermus thermophilus
J.Bacteriol., 195, 2013
4WXH
DownloadVisualize
BU of 4wxh by Molmil
Carminomycin-4-O-methyltransferase (DnrK) variant (298Ser insert) in complex with S-adenosyl-L-homocysteine (SAH) and aclacinomycin T
Descriptor: (2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, Carminomycin 4-O-methyltransferase DnrK, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Metsa-Ketela, M, Niiranen, L.
Deposit date:2014-11-13
Release date:2015-07-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Divergent evolution of an atypical S-adenosyl-l-methionine-dependent monooxygenase involved in anthracycline biosynthesis.
Proc.Natl.Acad.Sci.USA, 112, 2015
3VVF
DownloadVisualize
BU of 3vvf by Molmil
Crystal structure of TTC0807 complexed with Arginine
Descriptor: ARGININE, Amino acid ABC transporter, binding protein, ...
Authors:Tomita, T, Kanemaru, Y, Hasebe, F, Kuzuyama, T, Nishiyama, M.
Deposit date:2012-07-21
Release date:2013-06-26
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Two ATP-Binding Cassette Transporters Involved in (S)-2-Aminoethyl-Cysteine Uptake in Thermus thermophilus
J.Bacteriol., 195, 2013
4BTE
DownloadVisualize
BU of 4bte by Molmil
DJ-1 Cu(I) complex
Descriptor: COPPER (I) ION, PROTEIN DJ-1
Authors:Puno, M.R.A, Odell, M, Moody, P.C.E.
Deposit date:2013-06-14
Release date:2013-11-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Structure of Cu(I)-Bound Dj-1 Reveals a Biscysteinate Metal Binding Site at the Homodimer Interface: Insights Into Mutational Inactivation of Dj-1 in Parkinsonism.
J.Am.Chem.Soc., 135, 2013

238582

건을2025-07-09부터공개중

PDB statisticsPDBj update infoContact PDBjnumon