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8QA2
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Cryo-EM structure of Cx26 solubilised in LMNG: classification on subunit A; Nconst-mon conformation
Descriptor: Gap junction beta-2 protein, PHOSPHATIDYLETHANOLAMINE
Authors:Brotherton, D.H, Cameron, A.D.
Deposit date:2023-08-22
Release date:2024-06-12
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:Structures of wild-type and a constitutively closed mutant of connexin26 shed light on channel regulation by CO 2.
Elife, 13, 2024
8Q9Y
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BU of 8q9y by Molmil
The structure of thiocyanate dehydrogenase from Pelomicrobium methylotrophicum in complex with inhibitor thiourea at 1.10 A resolution
Descriptor: COPPER (II) ION, GLYCEROL, THIOUREA, ...
Authors:Varfolomeeva, L.A, Polyakov, K.M, Shipkov, N.S, Dergousova, N.I, Boyko, K.M, Tikhonova, T.V, Popov, V.O.
Deposit date:2023-08-22
Release date:2023-09-13
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Structure of thiocyanate dehydrogenase from Pelomicrobium methylotrophicum at atomic resolution
To Be Published
8Q9X
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BU of 8q9x by Molmil
The structure of thiocyanate dehydrogenase from Pelomicrobium methylotrophicum with molecular oxygen at 1.05 A resolution
Descriptor: COPPER (II) ION, GLYCEROL, OXYGEN MOLECULE, ...
Authors:Varfolomeeva, L.A, Polyakov, K.M, Shipkov, N.S, Dergousova, N.I, Boyko, K.M, Tikhonova, T.V, Popov, V.O.
Deposit date:2023-08-22
Release date:2023-09-13
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Structure of thiocyanate dehydrogenase from Pelomicrobium methylotrophicum at atomic resolution
To Be Published
8Q9V
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BU of 8q9v by Molmil
S-methylthiourocanate hydratase from Variovorax sp. RA8 in complex with NAD+ and imidazolone propionate
Descriptor: 1,2-ETHANEDIOL, 3-[(4~{R})-5-oxidanylidene-1,4-dihydroimidazol-4-yl]propanoic acid, ACETIC ACID, ...
Authors:Vasseur, C.M, Seebeck, F.P.
Deposit date:2023-08-21
Release date:2024-03-06
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure and Substrate Specificity of S -Methyl Thiourocanate Hydratase.
Acs Chem.Biol., 19, 2024
8Q9U
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BU of 8q9u by Molmil
S-methylthiourocanate hydratase, variant R450A, from Variovorax sp. RA8 in complex with NAD+
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, urocanate hydratase
Authors:Vasseur, C.M, Seebeck, F.P.
Deposit date:2023-08-21
Release date:2024-03-06
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and Substrate Specificity of S -Methyl Thiourocanate Hydratase.
Acs Chem.Biol., 19, 2024
8Q9S
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BU of 8q9s by Molmil
STRUCTURE OF PROTEIN KINASE CK2 CATALYTIC SUBUNIT (ISOFORM CK2ALPHA'; CSNK2A2 GENE PRODUCT) IN COMPLEX WITH THE INHIBITOR SGC-CK2-1
Descriptor: 1,2-ETHANEDIOL, Casein kinase II subunit alpha', ~{N}-[5-[[3-cyano-7-(cyclopropylamino)-3~{H}-pyrazolo[1,5-a]pyrimidin-5-yl]amino]-2-methyl-phenyl]propanamide
Authors:Werner, C, Lindenblatt, D, Niefind, K.
Deposit date:2023-08-21
Release date:2023-12-06
Method:X-RAY DIFFRACTION (1.352 Å)
Cite:Discovery and Exploration of Protein Kinase CK2 Binding Sites Using CK2alpha Cys336Ser as an Exquisite Crystallographic Tool
Kinases Phosphatases, 2023
8Q9R
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BU of 8q9r by Molmil
Crystal structure of MADS-box/MEF2D N-terminal domain bound to dsDNA and HDAC9 deacetylase binding motif
Descriptor: Histone deacetylase 9 (HDAC9) binding motif peptide: EVKQKLQEFLLSKS, MADS box dsDNA: AACTATTTATAAGA, MADS box dsDNA: TCTTATAAATAGT, ...
Authors:Chinellato, M, Carli, A, Perin, S, Mazzoccato, Y, Di Giorgio, E, Brancolini, C, Angelini, A, Cendron, L.
Deposit date:2023-08-20
Release date:2024-04-17
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Folding of Class IIa HDAC Derived Peptides into alpha-helices Upon Binding to Myocyte Enhancer Factor-2 in Complex with DNA.
J.Mol.Biol., 436, 2024
8Q9Q
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BU of 8q9q by Molmil
Crystal Structure of the MADS-box/MEF2 Domain of MEF2D bound to dsDNA and HDAC7 deacetylase binding motif
Descriptor: HDAC7 (histone deacetylase 7) binding motif peptide: GLY-VAL-VAL-LYS-GLN-LYS-LEU-ALA-GLU-VAL-ILE-LEU-LYS-LYS-GLN, MADS box dsDNA: AACTATTTATAAGA, MADS box dsDNA: TCTTATAAATAGTT, ...
Authors:Chinellato, M, Carli, A, Perin, S, Mazzocato, Y, Biondi, B, Di Giorgio, E, Brancolini, C, Angelini, A, Cendron, L.
Deposit date:2023-08-20
Release date:2024-04-17
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Folding of Class IIa HDAC Derived Peptides into alpha-helices Upon Binding to Myocyte Enhancer Factor-2 in Complex with DNA.
J.Mol.Biol., 436, 2024
8Q9P
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BU of 8q9p by Molmil
Crystal Structure of the MADS-box/MEF2 Domain of MEF2D bound to dsDNA and HDAC5 deacetylase binding motif
Descriptor: HDAC5 (histone deacetylase 5) binding motif peptide: TRP-GLY-SER-GLY-GLU-VAL-LYS-LEU-ARG-LEU-GLN-GLU-PHE-LEU-LEU-SER-LYS-SER, MADS box dsDNA fw: AACTATTTATAAGA, MADS box dsNA rev:TCTTATAAATAGTT, ...
Authors:Chinellato, M, Carli, A, Perin, S, Mazzocato, Y, Biondi, B, Di Giorgio, E, Brancolini, C, Angelini, A, Cendron, L.
Deposit date:2023-08-20
Release date:2024-04-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Folding of Class IIa HDAC Derived Peptides into alpha-helices Upon Binding to Myocyte Enhancer Factor-2 in Complex with DNA.
J.Mol.Biol., 436, 2024
8Q9N
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BU of 8q9n by Molmil
Crystal Structure of the MADS-box/MEF2 Domain of MEF2D bound to dsDNA and MITR deacetylase binding motif mutant L151V.
Descriptor: DIMETHYL SULFOXIDE, DNA MADS box, MEF2D protein, ...
Authors:Chinellato, M, Carli, A, Perin, S, Mazzocato, Y, Biondi, B, Di Giorgio, E, Brancolini, C, Angelini, A, Cendron, L.
Deposit date:2023-08-20
Release date:2024-06-26
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Folding of Class IIa HDAC Derived Peptides into alpha-helices Upon Binding to Myocyte Enhancer Factor-2 in Complex with DNA.
J.Mol.Biol., 436, 2024
8Q8O
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BU of 8q8o by Molmil
PA14_16140 protein: the regulator of an operon involved in the biofilm formation in PA14 P. aeruginosa
Descriptor: DUF2170 family protein, GLYCEROL, Tb-Xo4
Authors:Broutin, I, Phan, G, Girard, E.
Deposit date:2023-08-18
Release date:2024-02-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:BacA: a possible regulator that contributes to the biofilm formation of Pseudomonas aeruginosa .
Front Microbiol, 15, 2024
8Q89
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BU of 8q89 by Molmil
Crystal structure of Apis mellifera glutathione transferase delta 1 in a covalent dimeric state
Descriptor: Glutathione S-transferase D1 isoform X1
Authors:Schwartz, M, Neiers, F.
Deposit date:2023-08-18
Release date:2023-10-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure-activity analysis suggests an olfactory function for the unique antennal delta glutathione transferase of Apis mellifera.
Febs Lett., 597, 2023
8Q7Y
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BU of 8q7y by Molmil
ESIBD structure of beta-galactosidase
Descriptor: Beta-galactosidase
Authors:Esser, T, Boehning, J, Bharat, T.A.M, Rauschenbach, S.
Deposit date:2023-08-17
Release date:2024-01-10
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Cryo-EM of soft-landed beta-galactosidase: Gas-phase and native structures are remarkably similar.
Sci Adv, 10, 2024
8Q7S
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BU of 8q7s by Molmil
Crystal structure of the SARS-CoV-2 RBD (Wuhan) with neutralizing VHHs Ma6F06 and Re21H01
Descriptor: 1,2-ETHANEDIOL, 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, GLYCEROL, ...
Authors:Guttler, T, Aksu, M, Gorlich, D.
Deposit date:2023-08-16
Release date:2023-12-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Nanobodies to multiple spike variants and inhalation of nanobody-containing aerosols neutralize SARS-CoV-2 in cell culture and hamsters.
Antiviral Res., 221, 2023
8Q7J
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BU of 8q7j by Molmil
Conformations of macrocyclic peptides sampled by exact NOEs: models for cell-permeability
Descriptor: CYCLOSPORIN A
Authors:Ruedisser, S.H, Matabaro, E, Sonderegger, L, Guentert, P, Kuenzler, M, Gossert, A.D.
Deposit date:2023-08-16
Release date:2023-12-06
Last modified:2024-01-03
Method:SOLUTION NMR
Cite:Conformations of Macrocyclic Peptides Sampled by Nuclear Magnetic Resonance: Models for Cell-Permeability.
J.Am.Chem.Soc., 145, 2023
8Q79
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BU of 8q79 by Molmil
Structure of mBaoJin at pH 6.5
Descriptor: CHLORIDE ION, mBaoJin
Authors:Samygina, V.R, Subach, O.M, Vlaskina, A.V, Nikolaeva, A.Y, Borshchevsky, V, Qin, W, Subach, F.V.
Deposit date:2023-08-15
Release date:2023-12-27
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Bright and stable monomeric green fluorescent protein derived from StayGold.
Nat.Methods, 21, 2024
8Q76
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BU of 8q76 by Molmil
Copper-transporting ATPase HMA4 in E2P state with BeF
Descriptor: Copper-transporting ATPase HMA4, MAGNESIUM ION
Authors:Guo, Z, Gourdon, P, Wang, K.
Deposit date:2023-08-15
Release date:2024-06-26
Method:ELECTRON MICROSCOPY (3.29 Å)
Cite:Diverse roles of the metal binding domains and transport mechanism of copper transporting P-type ATPases.
Nat Commun, 15, 2024
8Q75
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BU of 8q75 by Molmil
Copper-transporting ATPase HMA4 in E2P state with AlF
Descriptor: Copper-transporting ATPase HMA4, MAGNESIUM ION, TETRAFLUOROALUMINATE ION
Authors:Guo, Z, Gourdon, P, Wang, K.
Deposit date:2023-08-15
Release date:2024-06-26
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Diverse roles of the metal binding domains and transport mechanism of copper transporting P-type ATPases.
Nat Commun, 15, 2024
8Q74
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BU of 8q74 by Molmil
Copper-transporting ATPase HMA4 in E1 state with Cu
Descriptor: COPPER (II) ION, Copper-transporting ATPase HMA4
Authors:Guo, Z, Gourdon, P, Wang, K.
Deposit date:2023-08-15
Release date:2024-06-26
Method:ELECTRON MICROSCOPY (3.68 Å)
Cite:Diverse roles of the metal binding domains and transport mechanism of copper transporting P-type ATPases.
Nat Commun, 15, 2024
8Q73
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BU of 8q73 by Molmil
Copper-transporting ATPase HMA4 in E1 state apo
Descriptor: Copper-transporting ATPase HMA4
Authors:Guo, Z, Gourdon, P, Wang, K.
Deposit date:2023-08-15
Release date:2024-06-26
Method:ELECTRON MICROSCOPY (3.58 Å)
Cite:Diverse roles of the metal binding domains and transport mechanism of copper transporting P-type ATPases.
Nat Commun, 15, 2024
8Q70
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BU of 8q70 by Molmil
tRNA pseudouridine synthase A homodimer
Descriptor: CHLORIDE ION, MAGNESIUM ION, tRNA pseudouridine synthase A
Authors:Pacesa, M, Correia, B.E, Levy, E.D.
Deposit date:2023-08-15
Release date:2023-11-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:An atlas of protein homo-oligomerization across domains of life.
Cell, 187, 2024
8Q6Z
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BU of 8q6z by Molmil
Crystal structure of Cytochrome P450 GymB1 from Streptomyces flavidovirens
Descriptor: GLYCEROL, GymB1, PROTOPORPHYRIN IX CONTAINING FE
Authors:Freytag, J, Kelm, T, Stehle, T, Zocher, G.
Deposit date:2023-08-15
Release date:2024-06-26
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Intramolecular Coupling and Nucleobase Transfer - How Cytochrome P450 Enzymes GymBx Establish Their Chemoselectivity
Chemcatchem, 16, 2024
8Q6M
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BU of 8q6m by Molmil
Human SOD1 low dose data collecton
Descriptor: ACETATE ION, COPPER (II) ION, SULFATE ION, ...
Authors:Antonyuk, S.V, Hossain, A, Agar, J.N, Hasnain, S.S.
Deposit date:2023-08-14
Release date:2023-12-13
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Evaluating protein cross-linking as a therapeutic strategy to stabilize SOD1 variants in a mouse model of familial ALS.
Plos Biol., 22, 2024
8Q6K
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BU of 8q6k by Molmil
Human IgD Fab in complex with an orthosteric inhibitor of Phl p 7
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Human IgD Fab heavy chain, ...
Authors:Davies, A.M, Vester, S.K, McDonnell, J.M.
Deposit date:2023-08-11
Release date:2023-12-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Expanding the Anti-Phl p 7 Antibody Toolkit: An Anti-Idiotype Nanobody Inhibitor.
Antibodies, 12, 2023
8Q6F
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BU of 8q6f by Molmil
HUMAN PI4KIIIB IN COMPLEX WITH COVALENTLY BOUND INHIBITOR (COMPOUND 4)
Descriptor: 1,2-ETHANEDIOL, 3-(3-fluorosulfonyloxy-4-methoxy-phenyl)-2,5-dimethyl-7-(pyridin-4-ylmethylamino)pyrazolo[1,5-a]pyrimidine, GLYCEROL, ...
Authors:Somers, D.O.
Deposit date:2023-08-11
Release date:2023-12-13
Method:X-RAY DIFFRACTION (1.506 Å)
Cite:Covalent targeting of non-cysteine residues in PI4KIII beta.
Rsc Chem Biol, 4, 2023

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