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5KWX
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BU of 5kwx by Molmil
NMR Solution Structure of Designed Peptide NC_EEH_D1
Descriptor: Designed peptide NC_EEH_D1
Authors:Harvey, P.J, Craik, D.J.
Deposit date:2016-07-19
Release date:2016-09-21
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Accurate de novo design of hyperstable constrained peptides.
Nature, 538, 2016
7UM8
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BU of 7um8 by Molmil
Crystal structure of E. Coli FabI in complex with NAD and (R,E)-3-(7-amino-8-oxo-6,7,8,9-tetrahydro-5H-pyrido[2,3-b]azepin-3-yl)-N-methyl-N-((3-methylbenzofuran-2-yl)methyl)acrylamide
Descriptor: (2E)-3-[(7R)-7-amino-8-oxo-6,7,8,9-tetrahydro-5H-pyrido[2,3-b]azepin-3-yl]-N-methyl-N-[(3-methyl-1-benzofuran-2-yl)methyl]prop-2-enamide, Enoyl-[acyl-carrier-protein] reductase [NADH] FabI, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Hajian, B.
Deposit date:2022-04-06
Release date:2023-02-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:An Iterative Approach Guides Discovery of the FabI Inhibitor Fabimycin, a Late-Stage Antibiotic Candidate with In Vivo Efficacy against Drug-Resistant Gram-Negative Infections
Acs Cent.Sci., 8, 2022
7UMY
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BU of 7umy by Molmil
Crystal structure of Acinetobacter baumannii FabI in complex with NAD and Fabimycin ((S,E)-3-(7-amino-8-oxo-6,7,8,9-tetrahydro-5H-pyrido[2,3-b]azepin-3-yl)-N-methyl-N-((3-methylbenzofuran-2-yl)methyl)acrylamide)
Descriptor: (2E)-3-[(7S)-7-amino-8-oxo-6,7,8,9-tetrahydro-5H-pyrido[2,3-b]azepin-3-yl]-N-methyl-N-[(3-methyl-1-benzofuran-2-yl)methyl]prop-2-enamide, Enoyl-[acyl-carrier-protein] reductase [NADH], NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Hajian, B.
Deposit date:2022-04-08
Release date:2023-02-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:An Iterative Approach Guides Discovery of the FabI Inhibitor Fabimycin, a Late-Stage Antibiotic Candidate with In Vivo Efficacy against Drug-Resistant Gram-Negative Infections
Acs Cent.Sci., 8, 2022
1A8S
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BU of 1a8s by Molmil
CHLOROPEROXIDASE F/PROPIONATE COMPLEX
Descriptor: CHLOROPEROXIDASE F, PROPANOIC ACID, SULFATE ION
Authors:Hofmann, B, Toelzer, S, Pelletier, I, Altenbuchner, J, Van Pee, K.-H, Hecht, H.-J.
Deposit date:1998-03-27
Release date:1998-06-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural investigation of the cofactor-free chloroperoxidases.
J.Mol.Biol., 279, 1998
4YBI
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BU of 4ybi by Molmil
Crystal structure of BACE with amino thiazine inhibitor LY2811376
Descriptor: (4S)-4-[2,4-difluoro-5-(pyrimidin-5-yl)phenyl]-4-methyl-5,6-dihydro-4H-1,3-thiazin-2-amine, Beta-secretase 1, GLYCEROL
Authors:Timm, D.E.
Deposit date:2015-02-18
Release date:2015-04-01
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Robust central reduction of amyloid-beta in humans with an orally available, non-peptidic beta-secretase inhibitor.
J.Neurosci., 31, 2011
3N5G
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BU of 3n5g by Molmil
Crystal Structure of histidine-tagged human thymidylate synthase
Descriptor: SULFATE ION, Thymidylate synthase
Authors:Pozzi, C, Cardinale, D, Guaitoli, G, Tondi, D, Luciani, R, Myllykallio, H, Ferrari, S, Costi, M.P, Mangani, S.
Deposit date:2010-05-25
Release date:2011-06-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Protein-protein interface-binding peptides inhibit the cancer therapy target human thymidylate synthase.
Proc.Natl.Acad.Sci.USA, 108, 2011
3N7O
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BU of 3n7o by Molmil
X-ray structure of human chymase in complex with small molecule inhibitor.
Descriptor: (S)-[(1S)-1-(5-chloro-1-benzothiophen-3-yl)-2-{[(E)-2-(3,4-difluorophenyl)ethenyl]amino}-2-oxoethyl]methylphosphinic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chymase, ...
Authors:Abad, M.C, Kervinen, J, Crysler, C, Bayoumy, S, Spurlino, J, Deckman, I, Greco, M.N, Maryanoff, B.E, Degaravilla, L.
Deposit date:2010-05-27
Release date:2010-07-21
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Potency variation of small-molecule chymase inhibitors across species.
Biochem. Pharmacol., 80, 2010
3N95
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BU of 3n95 by Molmil
Crystal structure of human CRFR2 alpha extracellular domain in complex with Urocortin 2
Descriptor: Maltose binding protein-CRFR2 alpha extracellular domain, Urocortin-2, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Pal, K, Swaminathan, K, Pioszak, A.A, Xu, H.E.
Deposit date:2010-05-28
Release date:2010-10-20
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Structural basis of ligand selectivity in human CRFR1 and CRFR2 alpha extracellular domain
To be Published
6GDY
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BU of 6gdy by Molmil
Crystal structure of 2OG oxygenase JMJD6 (aa 1-343) in complex with Fe(II) and 2OG
Descriptor: 2-OXOGLUTARIC ACID, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6, ...
Authors:Islam, M.S, Schofield, C.J, McDonough, M.A.
Deposit date:2018-04-24
Release date:2019-04-03
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Biochemical and structural investigations clarify the substrate selectivity of the 2-oxoglutarate oxygenase JMJD6.
J.Biol.Chem., 294, 2019
1A8U
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BU of 1a8u by Molmil
CHLOROPEROXIDASE T/BENZOATE COMPLEX
Descriptor: BENZOIC ACID, CHLOROPEROXIDASE T, SULFATE ION
Authors:Hofmann, B, Toelzer, S, Pelletier, I, Altenbuchner, J, Van Pee, K.-H, Hecht, H.-J.
Deposit date:1998-03-26
Release date:1998-06-17
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural investigation of the cofactor-free chloroperoxidases.
J.Mol.Biol., 279, 1998
5J3G
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BU of 5j3g by Molmil
Solution NMR structure of PT-free dsDNA from Streptomyces lividans
Descriptor: DNA (5'-D(*CP*GP*GP*CP*CP*GP*CP*CP*GP*A)-3'), DNA (5'-D(*TP*CP*GP*GP*CP*GP*GP*CP*CP*G)-3')
Authors:Lan, W, Cao, C.
Deposit date:2016-03-30
Release date:2016-06-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural investigation into physiological DNA phosphorothioate modification
Sci Rep, 6, 2016
1A8Q
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BU of 1a8q by Molmil
BROMOPEROXIDASE A1
Descriptor: BROMOPEROXIDASE A1
Authors:Hofmann, B, Toelzer, S, Pelletier, I, Altenbuchner, J, Van Pee, K.-H, Hecht, H.-J.
Deposit date:1998-03-27
Release date:1998-06-17
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural investigation of the cofactor-free chloroperoxidases.
J.Mol.Biol., 279, 1998
6FVN
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BU of 6fvn by Molmil
DNA polymerase sliding clamp from Mycobacterium tuberculosis with bound P7 peptide
Descriptor: Beta sliding clamp, P7 peptide
Authors:Martiel, I, Andre, C, Olieric, V, Guichard, G, Burnouf, D.
Deposit date:2018-03-04
Release date:2019-04-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.142 Å)
Cite:Peptide Interactions on Bacterial Sliding Clamps.
Acs Infect Dis., 2019
5HKF
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BU of 5hkf by Molmil
Crystal structure of Mycobacterium tuberculosis H37Rv orotate phosphoribosyltransferase in complex with 5-phospho-alpha-D-ribosyl 1-diphosphate (PRPP)
Descriptor: 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose, Orotate phosphoribosyltransferase
Authors:Donini, S, Ferraris, D.M, Bolognesi, G, Rizzi, M.
Deposit date:2016-01-14
Release date:2017-01-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural investigations on orotate phosphoribosyltransferase from Mycobacterium tuberculosis, a key enzyme of the de novo pyrimidine biosynthesis.
Sci Rep, 7, 2017
5HKL
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BU of 5hkl by Molmil
Crystal structure of Mycobacterium tuberculosis H37Rv orotate phosphoribosyltransferase in complex with inorganic phosphate
Descriptor: Orotate phosphoribosyltransferase, PHOSPHATE ION
Authors:Donini, S, Bolognesi, G, Rizzi, M.
Deposit date:2016-01-14
Release date:2017-01-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.899 Å)
Cite:Structural investigations on orotate phosphoribosyltransferase from Mycobacterium tuberculosis, a key enzyme of the de novo pyrimidine biosynthesis.
Sci Rep, 7, 2017
3HTH
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BU of 3hth by Molmil
Crystal structure of multidrug binding protein EbrR complexed with proflavin
Descriptor: EbrA repressor, NICKEL (II) ION, PROFLAVIN
Authors:Dong, J, Ni, L, Schumacher, M, Brennan, R.
Deposit date:2009-06-11
Release date:2010-07-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural plasticity is key to multiple ligand binding by the multidrug binding regulator EbrR
To be Published
6QPH
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BU of 6qph by Molmil
Dunaliella minimal PSI complex
Descriptor: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, ...
Authors:Klaiman, D, Caspy, I, Nelson, N.
Deposit date:2019-02-14
Release date:2020-02-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structure of a minimal photosystem I from the green alga Dunaliella salina.
Nat.Plants, 6, 2020
3NDO
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BU of 3ndo by Molmil
Crystal structure of deoxyribose phosphate aldolase from mycobacterium smegmatis
Descriptor: AMMONIUM ION, Deoxyribose-phosphate aldolase, GLYCEROL, ...
Authors:SSGCID, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2010-06-07
Release date:2010-07-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Increasing the structural coverage of tuberculosis drug targets.
Tuberculosis (Edinb), 95, 2015
6N1W
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BU of 6n1w by Molmil
Cryo-EM structure at 4.2 A resolution of vaccine-elicited antibody DFPH-a.15 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DFPH-a.15 Light chain, ...
Authors:Acharya, P, Kwong, P.D.
Deposit date:2018-11-12
Release date:2019-07-24
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Antibody Lineages with Vaccine-Induced Antigen-Binding Hotspots Develop Broad HIV Neutralization.
Cell, 178, 2019
6OVB
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BU of 6ovb by Molmil
Crystal structure of a Bacillus thuringiensis Cry1Da tryptic core variant
Descriptor: Active core crystal toxin protein 1D
Authors:Rydel, T.J, Halls, C, Evdokimov, A.G, Beishir, S.C.
Deposit date:2019-05-07
Release date:2019-06-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.611 Å)
Cite:Bacillus thuringiensis Cry1Da_7 and Cry1B.868 Protein Interactions with Novel Receptors Allow Control of Resistant Fall Armyworms, Spodoptera frugiperda (J.E. Smith).
Appl.Environ.Microbiol., 85, 2019
5HKI
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BU of 5hki by Molmil
Crystal structure of Mycobacterium tuberculosis H37Rv orotate phosphoribosyltransferase in complex with Fe(III) dicitrate
Descriptor: Iron(III) dicitrate, Orotate phosphoribosyltransferase
Authors:Donini, S, Ferraris, D.M, Bolognesi, G, Rizzi, M.
Deposit date:2016-01-14
Release date:2017-01-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural investigations on orotate phosphoribosyltransferase from Mycobacterium tuberculosis, a key enzyme of the de novo pyrimidine biosynthesis.
Sci Rep, 7, 2017
7WGI
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BU of 7wgi by Molmil
Crystal structure of AflSQS from Aspergillus flavus
Descriptor: INDOLE, PHOSPHATE ION, Squalene synthase
Authors:Shang, N, Liu, W.D, Chen, C.C, Guo, R.T.
Deposit date:2021-12-28
Release date:2022-11-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A Structural and Bioinformatics Investigation of a Fungal Squalene Synthase and Comparisons with Other Membrane Proteins.
Acs Omega, 7, 2022
7WGH
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BU of 7wgh by Molmil
Crystal structure of AflSQS from Aspergillus flavus in complex with FSPP
Descriptor: PHOSPHATE ION, PYROPHOSPHATE 2-, S-[(2E,6E)-3,7,11-TRIMETHYLDODECA-2,6,10-TRIENYL] TRIHYDROGEN THIODIPHOSPHATE, ...
Authors:Shang, N, Liu, W.D, Chen, C.C, Guo, R.T.
Deposit date:2021-12-28
Release date:2022-11-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:A Structural and Bioinformatics Investigation of a Fungal Squalene Synthase and Comparisons with Other Membrane Proteins.
Acs Omega, 7, 2022
6N1V
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BU of 6n1v by Molmil
Cryo-EM structure at 4.0 A resolution of vaccine-elicited antibody A12V163-a.01 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, A12V163-a.01 Heavy chain, ...
Authors:Acharya, P, Kwong, P.D.
Deposit date:2018-11-12
Release date:2019-07-24
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Antibody Lineages with Vaccine-Induced Antigen-Binding Hotspots Develop Broad HIV Neutralization.
Cell, 178, 2019
4KNL
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BU of 4knl by Molmil
Crystal structure of Staphylococcus aureus hydrolase AmiA in complex with its ligand
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Bifunctional autolysin, D(-)-TARTARIC ACID, ...
Authors:Buettner, F.M, Stehle, T.
Deposit date:2013-05-10
Release date:2014-03-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure-function analysis of Staphylococcus aureus amidase reveals the determinants of peptidoglycan recognition and cleavage.
J.Biol.Chem., 289, 2014

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