PDB: 72372 resultsInfo pagesStatus searchChemie searchBIRD

---

8QXM	Cryo-EM structure of tetrameric human SAMHD1 State III - Relaxed Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, ... Authors: Acton, O.J, Sheppard, D, Rosenthal, P.B, Taylor, I.A. Deposit date: 2023-10-24 Release date: 2024-05-15 Last modified: 2024-05-22 Method: ELECTRON MICROSCOPY (2.94 Å) Cite: Platform-directed allostery and quaternary structure dynamics of SAMHD1 catalysis. Nat Commun, 15, 2024
8QXN	Cryo-EM structure of tetrameric human SAMHD1 State IV - Depleted relaxed Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, ... Authors: Acton, O.J, Sheppard, D, Rosenthal, P.B, Taylor, I.A. Deposit date: 2023-10-24 Release date: 2024-05-15 Last modified: 2024-05-22 Method: ELECTRON MICROSCOPY (2.98 Å) Cite: Platform-directed allostery and quaternary structure dynamics of SAMHD1 catalysis. Nat Commun, 15, 2024
8QXK	Cryo-EM structure of tetrameric human SAMHD1 State I - Tense Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, ... Authors: Acton, O.J, Sheppard, D, Rosenthal, P.B, Taylor, I.A. Deposit date: 2023-10-24 Release date: 2024-05-15 Last modified: 2024-05-22 Method: ELECTRON MICROSCOPY (2.66 Å) Cite: Platform-directed allostery and quaternary structure dynamics of SAMHD1 catalysis. Nat Commun, 15, 2024
8QXO	Cryo-EM structure of tetrameric human SAMHD1 State V - Depleted relaxed Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, ... Authors: Acton, O.J, Sheppard, D, Rosenthal, P.B, Taylor, I.A. Deposit date: 2023-10-24 Release date: 2024-05-15 Last modified: 2024-05-22 Method: ELECTRON MICROSCOPY (3.43 Å) Cite: Platform-directed allostery and quaternary structure dynamics of SAMHD1 catalysis. Nat Commun, 15, 2024
1C9B	CRYSTAL STRUCTURE OF A HUMAN TBP CORE DOMAIN-HUMAN TFIIB CORE DOMAIN COMPLEX BOUND TO AN EXTENDED, MODIFIED ADENOVIRAL MAJOR LATE PROMOTER (ADMLP) Descriptor: ADMLP TATA-BOX DNA CONTAINING IIB RECOGNITION ELEMENT, GENERAL TRANSCRIPTION FACTOR IIB, TATA BOX BINDING PROTEIN Authors: Tsai, F.T.F, Sigler, P.B. Deposit date: 1999-08-01 Release date: 2000-01-10 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.65 Å) Cite: Structural basis of preinitiation complex assembly on human pol II promoters. EMBO J., 19, 2000
4AK9	Structure of chloroplast FtsY from Physcomitrella patens Descriptor: CPFTSY Authors: Trager, C, Schunemann, D, Hofmann, E. Deposit date: 2012-02-22 Release date: 2013-01-16 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Evolution from the Prokaryotic to the Higher Plant Chloroplast Signal Recognition Particle: The Signal Recognition Particle RNA is Conserved in Plastids of a Wide Range of Photosynthetic Organisms. Plant Cell, 24, 2012
2NVO	Crystal structure of Deinococcus radiodurans RO (RSR) protein Descriptor: CALCIUM ION, Ro sixty-related protein, RSR Authors: Ramesh, A, Sacchettini, J.C. Deposit date: 2006-11-13 Release date: 2007-03-27 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (1.89 Å) Cite: Crystal structure of Rsr, an ortholog of the antigenic Ro protein, links conformational flexibility to RNA binding activity. J.Biol.Chem., 282, 2007
1AN7	RIBOSOMAL PROTEIN S8 FROM THERMUS THERMOPHILUS Descriptor: RIBOSOMAL PROTEIN S8 Authors: Nevskaya, N, Nikonov, S, Al-Karadaghi, S. Deposit date: 1997-06-27 Release date: 1998-07-01 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Crystal structure of ribosomal protein S8 from Thermus thermophilus reveals a high degree of structural conservation of a specific RNA binding site. J.Mol.Biol., 279, 1998
2B3Y	Structure of a monoclinic crystal form of human cytosolic aconitase (IRP1) Descriptor: ACETATE ION, FORMIC ACID, GLYCEROL, ... Authors: Dupuy, J, Fontecilla-Camps, J.C, Volbeda, A. Deposit date: 2005-09-22 Release date: 2006-01-10 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Crystal structure of human iron regulatory protein 1 as cytosolic aconitase Structure, 14, 2006
4IJF	Crystal structure of the Zaire ebolavirus VP35 interferon inhibitory domain K222A/R225A/K248A/K251A mutant Descriptor: Polymerase cofactor VP35 Authors: Binning, J.B, Wang, T, Leung, D.W, Xu, W, Borek, D, Amarasinghe, G.K. Deposit date: 2012-12-21 Release date: 2013-10-09 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.506 Å) Cite: Development of RNA Aptamers Targeting Ebola Virus VP35. Biochemistry, 52, 2013
2P4A	X-ray structure of a camelid affinity matured single-domain vhh antibody fragment in complex with RNASE A Descriptor: ANTIBODY CAB-RN05, Ribonuclease pancreatic, SULFATE ION Authors: Tereshko, V, Koide, A, Uysal, S, Koide, S. Deposit date: 2007-03-11 Release date: 2007-08-28 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Exploring the capacity of minimalist protein interfaces: interface energetics and affinity maturation to picomolar KD of a single-domain antibody with a flat paratope. J.Mol.Biol., 373, 2007
2HOH	RIBONUCLEASE T1 (N9A MUTANT) COMPLEXED WITH 2'GMP Descriptor: CALCIUM ION, GUANOSINE-2'-MONOPHOSPHATE, PHOSPHATE ION, ... Authors: Langhorst, U, Loris, R, Denisov, V.P, Doumen, J, Roose, P, Maes, D, Halle, B, Steyaert, J. Deposit date: 1998-09-14 Release date: 1998-09-23 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Dissection of the structural and functional role of a conserved hydration site in RNase T1. Protein Sci., 8, 1999
2CPJ	Solution structure of the N-terminal RNA recognition motif of NonO Descriptor: Non-POU domain-containing octamer-binding protein Authors: Nagata, T, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2005-05-19 Release date: 2005-11-19 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution structure of the N-terminal RNA recognition motif of NonO To be Published
1DMG	CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN L4 Descriptor: CITRIC ACID, RIBOSOMAL PROTEIN L4 Authors: Worbs, M, Huber, R, Wahl, M.C. Deposit date: 1999-12-14 Release date: 2000-12-18 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Crystal structure of ribosomal protein L4 shows RNA-binding sites for ribosome incorporation and feedback control of the S10 operon. EMBO J., 19, 2000
2P49	Complex of a camelid single-domain vhh antibody fragment with RNASE A at 1.4A resolution: native mono_1 crystal form Descriptor: ANTIBODY CAB-RN05, PHOSPHATE ION, Ribonuclease pancreatic Authors: Tereshko, V, Uysal, S, Margalef, K, Koide, A, Kossiakoff, A.A, Koide, S. Deposit date: 2007-03-11 Release date: 2007-08-28 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.38 Å) Cite: Exploring the capacity of minimalist protein interfaces: interface energetics and affinity maturation to picomolar KD of a single-domain antibody with a flat paratope. J.Mol.Biol., 373, 2007
3H5Y	Norovirus polymerase+primer/template+CTP complex at 6 mM MnCl2 Descriptor: 5'-R(*UP*GP*CP*CP*CP*GP*GP*G)-3', 5'-R(P*UP*GP*CP*CP*CP*GP*GP*GP*C)-3', CYTIDINE-5'-TRIPHOSPHATE, ... Authors: Zamyatkin, D.F, Parra, F, Machin, A, Grochulski, P, Ng, K.K.S. Deposit date: 2009-04-22 Release date: 2009-05-19 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.77 Å) Cite: Binding of 2'-amino-2'-deoxycytidine-5'-triphosphate to norovirus polymerase induces rearrangement of the active site. J.Mol.Biol., 390, 2009
3D3Z	Crystal structure of Actibind a T2 RNase Descriptor: 1,2-ETHANEDIOL, 1-(5-deoxy-beta-L-xylofuranosyl)pyrimidine-2,4(1H,3H)-dione, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Gonzalez, A, Almog, O. Deposit date: 2008-05-13 Release date: 2009-06-02 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Crystal structue of Actibind a T2 RNase To be Published
1A32	RIBOSOMAL PROTEIN S15 FROM BACILLUS STEAROTHERMOPHILUS Descriptor: RIBOSOMAL PROTEIN S15 Authors: Clemons Junior, W.M, Davies, C, White, S.W, Ramakrishnan, V. Deposit date: 1998-01-27 Release date: 1998-05-27 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Conformational variability of the N-terminal helix in the structure of ribosomal protein S15. Structure, 6, 1998
3EAQ	Novel dimerization motif in the DEAD box RNA helicase Hera form 2, complete dimer, symmetric Descriptor: CHLORIDE ION, Heat resistant RNA dependent ATPase Authors: Klostermeier, D, Rudolph, M.G. Deposit date: 2008-08-26 Release date: 2008-12-09 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2.3 Å) Cite: A novel dimerization motif in the C-terminal domain of the Thermus thermophilus DEAD box helicase Hera confers substantial flexibility. Nucleic Acids Res., 37, 2009
4IN0	Crystal Structure of human splicing factor dim2/TXNL4B Descriptor: Thioredoxin-like protein 4B, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose Authors: Jin, T.C, Guo, F, Zhang, Y.Z. Deposit date: 2013-01-03 Release date: 2013-03-13 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.327 Å) Cite: High-resolution crystal structure of human Dim2/TXNL4B. Acta Crystallogr.,Sect.F, 69, 2013
332D	CRYSTAL STRUCTURE OF R(GUGUGUA)D(C) WITH TANDEM G-U/U-G WOBBLE PAIRS WITH STRAND SLIPPAGE Descriptor: DNA/RNA (5'-R(*GP*UP*GP*UP*GP*UP*AP*)-D(*C)-3') Authors: Biswas, R, Sundaralingam, M. Deposit date: 1997-05-14 Release date: 1997-09-23 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (1.58 Å) Cite: Crystal structure of r(GUGUGUA)dC with tandem G x U/U x G wobble pairs with strand slippage. J.Mol.Biol., 270, 1997
3KCH	Baranase crosslinked by glutaraldehyde Descriptor: PENTANEDIAL, Ribonuclease Authors: Prange, T, Salem, M, Mauguen, Y. Deposit date: 2009-10-21 Release date: 2010-03-09 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.94 Å) Cite: Revisiting glutaraldehyde cross-linking: the case of the Arg-Lys intermolecular doublet Acta Crystallogr.,Sect.F, 66, 2010
4L3B	X-ray structure of the HRV2 A particle uncoating intermediate Descriptor: Protein VP1, Protein VP2, Protein VP3 Authors: Vives-Adrian, L, Querol-Audi, J, Garriga, D, Pous, J, Verdaguer, N. Deposit date: 2013-06-05 Release date: 2013-11-27 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (6.5 Å) Cite: Uncoating of common cold virus is preceded by RNA switching as determined by X-ray and cryo-EM analyses of the subviral A-particle. Proc.Natl.Acad.Sci.USA, 110, 2013
6YWN	CutA in complex with CMPCPP Descriptor: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine, CALCIUM ION, CutA Authors: Malik, D, Kobylecki, K, Krawczyk, P, Poznanski, J, Jakielaszek, A, Napiorkowska, A, Dziembowski, A, Tomecki, R, Nowotny, M. Deposit date: 2020-04-29 Release date: 2020-08-05 Last modified: 2020-09-30 Method: X-RAY DIFFRACTION (1.45 Å) Cite: Structure and mechanism of CutA, RNA nucleotidyl transferase with an unusual preference for cytosine. Nucleic Acids Res., 48, 2020
6YWP	Structure of apo-CutA Descriptor: CutA, MAGNESIUM ION Authors: Malik, D, Kobylecki, K, Krawczyk, P, Poznanski, J, Jakielaszek, A, Napiorkowska, A, Dziembowski, A, Tomecki, R, Nowotny, M. Deposit date: 2020-04-29 Release date: 2020-08-05 Last modified: 2020-09-30 Method: X-RAY DIFFRACTION (2.25 Å) Cite: Structure and mechanism of CutA, RNA nucleotidyl transferase with an unusual preference for cytosine. Nucleic Acids Res., 48, 2020

<602603604605606607608609610611612613614615616617>