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5WKZ
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BU of 5wkz by Molmil
VH1-69 germline antibody predicted from CR6261
Descriptor: Immunoglobulin heavy variable 1-69D,IgG H chain, Lambda-chain (AA -20 to 215), SULFATE ION
Authors:Lang, S, Lee, P.S.
Deposit date:2017-07-25
Release date:2018-08-01
Last modified:2019-12-11
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Anti-idiotypic antibody K1-18 engages VH1-69 precursor and affinity-matured, anti-stem antibodies through mimicry of the HA stem
To Be Published
4MXQ
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BU of 4mxq by Molmil
42F3 TCR pCPC5/H-2Ld Complex
Descriptor: 42F3 alpha VmVh chimera, 42F3 beta VmVh chimera, H-2 class I histocompatibility antigen, ...
Authors:Birnbaum, M.E, Adams, J.J, Garcia, K.C.
Deposit date:2013-09-26
Release date:2015-08-19
Last modified:2018-09-26
Method:X-RAY DIFFRACTION (2.596 Å)
Cite:Structural interplay between germline interactions and adaptive recognition determines the bandwidth of TCR-peptide-MHC cross-reactivity.
Nat. Immunol., 17, 2016
5UKB
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BU of 5ukb by Molmil
VSV N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1004
Descriptor: Anti-vesicular stomatitis virus N VHH, Nucleocapsid, RNA (45-MER)
Authors:Hanke, L, Knockenhauer, K.E, Ploegh, H.L, Schwartz, T.U.
Deposit date:2017-01-20
Release date:2017-04-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (5.473 Å)
Cite:Vesicular stomatitis virus N protein-specific single-domain antibody fragments inhibit replication.
EMBO Rep., 18, 2017
4MVB
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BU of 4mvb by Molmil
42F3 pCPB7/H-2Ld Complex
Descriptor: 42F3 alpha VmCh, 42F3 beta VmCh, H-2 class I histocompatibility antigen, ...
Authors:Birnbaum, M.E, Adams, J.J, Garcia, K.C.
Deposit date:2013-09-23
Release date:2015-08-19
Last modified:2018-09-26
Method:X-RAY DIFFRACTION (3.088 Å)
Cite:Structural interplay between germline interactions and adaptive recognition determines the bandwidth of TCR-peptide-MHC cross-reactivity.
Nat. Immunol., 17, 2016
4N5E
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BU of 4n5e by Molmil
42F3 TCR pCPA12/H-2Ld complex
Descriptor: 42F3 alpha VmCh, 42F3 beta VmCh, H-2 class I histocompatibility antigen, ...
Authors:Birnbaum, M.E, Adams, J.J, Garcia, K.C.
Deposit date:2013-10-09
Release date:2015-08-19
Last modified:2018-09-26
Method:X-RAY DIFFRACTION (3.059 Å)
Cite:Structural interplay between germline interactions and adaptive recognition determines the bandwidth of TCR-peptide-MHC cross-reactivity.
Nat. Immunol., 17, 2016
4O58
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BU of 4o58 by Molmil
Crystal structure of broadly neutralizing antibody F045-092 in complex with A/Victoria/3/1975 (H3N2) influenza hemagglutinin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ...
Authors:Lee, P.S, Wilson, I.A.
Deposit date:2013-12-19
Release date:2014-04-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.7501 Å)
Cite:Receptor mimicry by antibody F045-092 facilitates universal binding to the H3 subtype of influenza virus.
Nat Commun, 5, 2014
4NM4
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BU of 4nm4 by Molmil
Crystal structure of broadly neutralizing antibody CR8043
Descriptor: Antibody CR8043, Heavy Chain, Light Chain, ...
Authors:Lee, P.S, Wilson, I.A.
Deposit date:2013-11-14
Release date:2013-12-25
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:A common solution to group 2 influenza virus neutralization.
Proc.Natl.Acad.Sci.USA, 111, 2014
4NUJ
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BU of 4nuj by Molmil
Crystal structure of HIV-1 broadly neutralizing antibody PGT152
Descriptor: PGT152 heavy chain, PGT152 light chain
Authors:Blattner, C, Wilson, I.A.
Deposit date:2013-12-03
Release date:2014-05-14
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.827 Å)
Cite:Structural Delineation of a Quaternary, Cleavage-Dependent Epitope at the gp41-gp120 Interface on Intact HIV-1 Env Trimers.
Immunity, 40, 2014
5WKI
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BU of 5wki by Molmil
Crystal structure of PG90 TCR-CD1b-PG complex
Descriptor: (19S,22R,25R)-22,25,26-trihydroxy-16,22-dioxo-17,21,23-trioxa-22lambda~5~-phosphahexacosan-19-yl (9E)-octadec-9-enoate, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Shahine, A, Gras, S, Rossjohn, J.
Deposit date:2017-07-25
Release date:2017-11-01
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:A molecular basis of human T cell receptor autoreactivity toward self-phospholipids.
Sci Immunol, 2, 2017
5WKO
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BU of 5wko by Molmil
Crystal structure of antibody 27F3 recognizing the HA from A/California/04/2009 (H1N1) influenza virus
Descriptor: Antibody 27F3 heavy chain, Antibody 27F3 light chain, Hemagglutinin
Authors:Wilson, I.A, Lang, S, Zhu, X.
Deposit date:2017-07-25
Release date:2017-10-25
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (3.492 Å)
Cite:Antibody 27F3 Broadly Targets Influenza A Group 1 and 2 Hemagglutinins through a Further Variation in VH1-69 Antibody Orientation on the HA Stem.
Cell Rep, 20, 2017
4NWT
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BU of 4nwt by Molmil
Crystal structure of the anti-human NGF Fab APE1531
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ACETATE ION, APE1531 Ab Fab heavy chain, ...
Authors:Verdino, P, Stanfield, R.L, Wilson, I.A.
Deposit date:2013-12-06
Release date:2014-10-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Nucleotide insertions and deletions complement point mutations to massively expand the diversity created by somatic hypermutation of antibodies.
J.Biol.Chem., 289, 2014
5WHJ
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BU of 5whj by Molmil
Crystal structure of Fab fragment of anti-FcRn antibody DX-2507
Descriptor: DX-2507 Fab heavy chain, DX-2507 Fab light chain
Authors:Edwards, T.E, Fairman, J.W, Nixon, A.E, Kenniston, J.A.
Deposit date:2017-07-17
Release date:2017-09-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural basis for pH-insensitive inhibition of immunoglobulin G recycling by an anti-neonatal Fc receptor antibody.
J. Biol. Chem., 292, 2017
4Q0X
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BU of 4q0x by Molmil
Crystal structure of non-neutralizing antibody in complex with Epitope II of HCV E2
Descriptor: Envelope glycoprotein E2, mAb 12 heavy chain, mAb 12 light chain
Authors:Deng, L, Zhang, P.
Deposit date:2014-04-02
Release date:2014-07-09
Last modified:2014-08-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Discrete conformations of epitope II on the hepatitis C virus E2 protein for antibody-mediated neutralization and nonneutralization.
Proc.Natl.Acad.Sci.USA, 111, 2014
5WER
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BU of 5wer by Molmil
Crystal Structure of TAPBPR and H2-Dd complex
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, CITRIC ACID, ...
Authors:Jiang, J.S, Natarajan, K, Boyd, L.F, Margulies, D.H.
Deposit date:2017-07-10
Release date:2017-10-18
Last modified:2019-08-28
Method:X-RAY DIFFRACTION (3.412 Å)
Cite:Crystal structure of a TAPBPR-MHC I complex reveals the mechanism of peptide editing in antigen presentation.
Science, 358, 2017
4OZH
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BU of 4ozh by Molmil
S16 protein complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Gliadin-alpha2 peptide, ...
Authors:Petersen, J, Reid, H.H, Rossjohn, J.
Deposit date:2014-02-16
Release date:2014-04-16
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:T-cell receptor recognition of HLA-DQ2-gliadin complexes associated with celiac disease.
Nat.Struct.Mol.Biol., 21, 2014
5WHK
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BU of 5whk by Molmil
Crystal structure of Fab fragment of antibody DX-2507 bound to FcRn-B2M
Descriptor: 1,2-ETHANEDIOL, 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, Beta-2-microglobulin, ...
Authors:Edwards, T.E, Clifton, M.C, Nixon, A.E, Kenniston, J.A.
Deposit date:2017-07-17
Release date:2017-09-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for pH-insensitive inhibition of immunoglobulin G recycling by an anti-neonatal Fc receptor antibody.
J. Biol. Chem., 292, 2017
4OCX
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BU of 4ocx by Molmil
Fab complex with methotrexate
Descriptor: Fab ADD056 Heavy Chain, Fab ADD056 Light Chain, N-(4-{[(2,4-DIAMINOPTERIDIN-1-IUM-6-YL)METHYL](METHYL)AMINO}BENZOYL)-L-GLUTAMIC ACID
Authors:Longenecker, K.L, Judge, R.A, Gayda, S, Manoj, S, Saldana, S, Ruan, Q, Swift, K, Tetin, S.
Deposit date:2014-01-09
Release date:2014-07-02
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Water channel in the binding site of a high affinity anti-methotrexate antibody.
Biochemistry, 53, 2014
5WLG
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BU of 5wlg by Molmil
Crystal Structure of H-2Db with the GAP501 peptide (SQL)
Descriptor: Beta-2-microglobulin, CHLORIDE ION, GAP50 peptide, ...
Authors:Gras, S, Farenc, C, Josephs, T, Rossjohn, J.
Deposit date:2017-07-26
Release date:2017-11-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A T Cell Receptor Locus Harbors a Malaria-Specific Immune Response Gene.
Immunity, 47, 2017
5UK4
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BU of 5uk4 by Molmil
VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307
Descriptor: Anti-vesicular stomatitis virus N VHH, Nucleoprotein, RNA (45-MER)
Authors:Hanke, L, Knockenhauer, K.E, Ploegh, H.L, Schwartz, T.U.
Deposit date:2017-01-19
Release date:2017-04-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.204 Å)
Cite:Vesicular stomatitis virus N protein-specific single-domain antibody fragments inhibit replication.
EMBO Rep., 18, 2017
5X5W
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BU of 5x5w by Molmil
Crystal structure of pseudorabies virus glycoprotein D
Descriptor: GD, Nectin-1
Authors:Li, A, Lu, G, Qi, J, Wu, L, Tian, K, Luo, T, Shi, Y, Yan, J, Gao, G.F.
Deposit date:2017-02-17
Release date:2017-04-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of pseudorabies virus glycoprotein D
To Be Published
4OZG
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BU of 4ozg by Molmil
D2 protein complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Petersen, J, Reid, H.H, Rossjohn, J.
Deposit date:2014-02-16
Release date:2014-04-16
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:T-cell receptor recognition of HLA-DQ2-gliadin complexes associated with celiac disease.
Nat.Struct.Mol.Biol., 21, 2014
5TR8
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BU of 5tr8 by Molmil
Crystal structure of vaccine-elicited pan- influenza H1N1 neutralizing murine antibody 441D6.
Descriptor: 441D6 Fab Heavy chain, 441D6 Fab Light chain, NICKEL (II) ION
Authors:Joyce, M.G, Kanekiyo, M, Mascola, J.R, Graham, B.S, Kwong, P.D.
Deposit date:2016-10-25
Release date:2018-05-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Mosaic nanoparticle display of diverse influenza virus hemagglutinins elicits broad B cell responses.
Nat.Immunol., 20, 2019
4P2C
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BU of 4p2c by Molmil
Complex of Shiga toxin 2e with a neutralizing single-domain antibody
Descriptor: Nanobody 1, Anti-F4+ETEC bacteria VHH variable region, Shiga toxin 2e, ...
Authors:Lo, A.W.H, Moonens, K, De Kerpel, M, Brys, L, Pardon, E, Remaut, H, De Greve, H.
Deposit date:2014-03-03
Release date:2014-07-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.818 Å)
Cite:The Molecular Mechanism of Shiga Toxin Stx2e Neutralization by a Single-domain Antibody Targeting the Cell Receptor-binding Domain.
J.Biol.Chem., 289, 2014
4QHL
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BU of 4qhl by Molmil
I3.2 (unbound) from CH103 Lineage
Descriptor: I3 heavy chain, UCA light chain
Authors:Fera, D, Harrison, S.C.
Deposit date:2014-05-28
Release date:2014-06-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.153 Å)
Cite:Affinity maturation in an HIV broadly neutralizing B-cell lineage through reorientation of variable domains.
Proc.Natl.Acad.Sci.USA, 111, 2014
5XRQ
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BU of 5xrq by Molmil
Crystal structure of human monoclonal antibody H3v-47
Descriptor: Fab H3v-47 heavy chain, Fab H3v-47 light chain
Authors:Zhang, H, Willson, I.A.
Deposit date:2017-06-09
Release date:2018-07-25
Last modified:2019-12-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A multifunctional human monoclonal neutralizing antibody that targets a unique conserved epitope on influenza HA.
Nat Commun, 9, 2018

223532

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