PDB: 1870 resultsInfo pagesStatus searchChemie searchBIRD

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4DOZ	Crystal structure of Pyrococcus furiosus Cmr2 (Cas10) Descriptor: Putative uncharacterized protein, ZINC ION Authors: Zhu, X, Ye, K. Deposit date: 2012-02-12 Release date: 2012-03-21 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Crystal structure of Cmr2 suggests a nucleotide cyclase-related enzyme in type III CRISPR-Cas systems Febs Lett., 586, 2012
5O9Z	Cryo-EM structure of a pre-catalytic human spliceosome primed for activation (B complex) Descriptor: 116 kDa U5 small nuclear ribonucleoprotein component, Homo sapiens RNA, U6 small nuclear 1 (RNU6-1), ... Authors: Bertram, K, Kastner, B. Deposit date: 2017-06-20 Release date: 2017-08-16 Last modified: 2018-10-24 Method: ELECTRON MICROSCOPY (4.5 Å) Cite: Cryo-EM Structure of a Pre-catalytic Human Spliceosome Primed for Activation. Cell, 170, 2017
6ZQD	Cryo-EM structure of the 90S pre-ribosome from Saccharomyces cerevisiae, state Post-A1 Descriptor: 13 kDa ribonucleoprotein-associated protein, 18S rRNA, 40S ribosomal protein S1-A, ... Authors: Cheng, J, Lau, B, Venuta, G.L, Berninghausen, O, Hurt, E, Beckmann, R. Deposit date: 2020-07-09 Release date: 2020-09-23 Last modified: 2024-05-01 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: 90 S pre-ribosome transformation into the primordial 40 S subunit. Science, 369, 2020
6ZQE	Cryo-EM structure of the 90S pre-ribosome from Saccharomyces cerevisiae, state Dis-A (Poly-Ala) Descriptor: 13 kDa ribonucleoprotein-associated protein, 18S rRNA, 40S ribosomal protein S1-A, ... Authors: Cheng, J, Lau, B, Venuta, G.L, Berninghausen, O, Hurt, E, Beckmann, R. Deposit date: 2020-07-09 Release date: 2020-09-23 Last modified: 2024-05-01 Method: ELECTRON MICROSCOPY (7.1 Å) Cite: 90 S pre-ribosome transformation into the primordial 40 S subunit. Science, 369, 2020
7O0G	Structure of the foamy viral protease-reverse transcriptase in complex with RNA/DNA hybrid. Descriptor: DNA (5'-D(*CP*CP*TP*CP*TP*CP*CP*TP*GP*GP*AP*CP*AP*AP*G)-3'), Pr125Pol, RNA (5'-R(*UP*UP*CP*UP*UP*GP*UP*CP*CP*AP*GP*GP*AP*GP*AP*GP*G)-3') Authors: Nowak, E, Nowacka, M, Nowotny, M. Deposit date: 2021-03-26 Release date: 2021-06-30 Last modified: 2024-06-19 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Structures of Substrate Complexes of Foamy Viral Protease-Reverse Transcriptase. J.Virol., 95, 2021
5MQF	Cryo-EM structure of a human spliceosome activated for step 2 of splicing (C* complex) Descriptor: 116 kDa U5 small nuclear ribonucleoprotein component, ATP-dependent RNA helicase DHX8, Cell division cycle 5-like protein, ... Authors: Bertram, K, Hartmuth, K, Kastner, B. Deposit date: 2016-12-20 Release date: 2017-03-22 Last modified: 2018-11-21 Method: ELECTRON MICROSCOPY (5.9 Å) Cite: Cryo-EM structure of a human spliceosome activated for step 2 of splicing. Nature, 542, 2017
8FKY	Human nucleolar pre-60S ribosomal subunit (State F) Descriptor: 28S rRNA, 5.8S rRNA, 60S ribosomal protein L10a, ... Authors: Vanden Broeck, A, Klinge, S. Deposit date: 2022-12-21 Release date: 2023-07-12 Last modified: 2023-07-19 Method: ELECTRON MICROSCOPY (2.67 Å) Cite: Principles of human pre-60 S biogenesis. Science, 381, 2023
6ZMW	Structure of a human 48S translational initiation complex Descriptor: 18S rRNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ... Authors: Brito Querido, J, Sokabe, M, Kraatz, S, Gordiyenko, Y, Skehel, M, Fraser, C, Ramakrishnan, V. Deposit date: 2020-07-04 Release date: 2020-09-23 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: Structure of a human 48Stranslational initiation complex. Science, 369, 2020
7A5P	Human C Complex Spliceosome - Medium-resolution PERIPHERY Descriptor: Cell division cycle 5-like protein, Crooked neck-like protein 1, Eukaryotic initiation factor 4A-III, ... Authors: Bertram, K, Kastner, B. Deposit date: 2020-08-21 Release date: 2020-10-14 Method: ELECTRON MICROSCOPY (5 Å) Cite: Structural Insights into the Roles of Metazoan-Specific Splicing Factors in the Human Step 1 Spliceosome. Mol.Cell, 80, 2020
5XJC	Cryo-EM structure of the human spliceosome just prior to exon ligation at 3.6 angstrom Descriptor: 116 kDa U5 small nuclear ribonucleoprotein component, ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ... Authors: Zhang, X, Yan, C, Hang, J, Finci, I.L, Lei, J, Shi, Y. Deposit date: 2017-04-30 Release date: 2017-07-05 Last modified: 2020-10-14 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: An Atomic Structure of the Human Spliceosome Cell, 169, 2017
2KEQ	Solution structure of DnaE intein from Nostoc punctiforme Descriptor: DNA polymerase III alpha subunit, Nucleic acid binding OB-fold tRNA/helicase-type Authors: Oeemig, J.S, Aranko, A.S, Djupsj, J.B, Iwai, H. Deposit date: 2009-02-02 Release date: 2009-05-19 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution structure of DnaE intein from Nostoc punctiforme: structural basis for the design of a new split intein suitable for site-specific chemical modification. Febs Lett., 583, 2009
8Q7N	cryo-EM structure of the human spliceosomal B complex protomer (tri-snRNP core region) Descriptor: 116 kDa U5 small nuclear ribonucleoprotein component, MINX pre-mRNA, Microfibrillar-associated protein 1, ... Authors: Zhang, Z, Kumar, V, Dybkov, O, Will, C.L, Urlaub, H, Stark, H, Luehrmann, R. Deposit date: 2023-08-16 Release date: 2024-01-24 Last modified: 2024-08-07 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Cryo-EM analyses of dimerized spliceosomes provide new insights into the functions of B complex proteins. Embo J., 43, 2024
7D4I	Cryo-EM structure of 90S small ribosomal precursors complex with the DEAH-box RNA helicase Dhr1 (State F) Descriptor: 13 kDa ribonucleoprotein-associated protein, 18S rRNA, 40S ribosomal protein S1-A, ... Authors: Du, Y, Zhang, J, An, W, Ye, K. Deposit date: 2020-09-24 Release date: 2021-10-06 Last modified: 2024-05-29 Method: ELECTRON MICROSCOPY (4 Å) Cite: Cryo-EM structure of 90S small ribosomal precursors complex with Dhr1 To Be Published
6FDP	NMR structure of the second TPR domain of the human RPAP3 protein in complex with HSP90 peptide DTSRMEEVD Descriptor: Heat shock protein HSP 90-alpha, RNA polymerase II-associated protein 3 Authors: Quinternet, M, Chagot, M.E, Manival, X. Deposit date: 2017-12-26 Release date: 2018-08-01 Last modified: 2024-06-19 Method: SOLUTION NMR Cite: Deep Structural Analysis of RPAP3 and PIH1D1, Two Components of the HSP90 Co-chaperone R2TP Complex. Structure, 26, 2018
6FDT	NMR structure of the second TPR domain of the human RPAP3 protein in complex with HSP70 peptide SGPTIEEVD Descriptor: Heat shock 70 kDa protein 1B, RNA polymerase II-associated protein 3 Authors: Quinternet, M, Chagot, M.E, Manival, X. Deposit date: 2017-12-26 Release date: 2018-08-01 Last modified: 2024-06-19 Method: SOLUTION NMR Cite: Deep Structural Analysis of RPAP3 and PIH1D1, Two Components of the HSP90 Co-chaperone R2TP Complex. Structure, 26, 2018
7QP6	Structure of the human 48S initiation complex in open state (h48S AUG open) Descriptor: 18S rRNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ... Authors: Yi, S.-H, Petrychenko, V, Schliep, J.E, Goyal, A, Linden, A, Chari, A, Urlaub, H, Stark, H, Rodnina, M.V, Adio, S, Fischer, N. Deposit date: 2022-01-03 Release date: 2022-05-11 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (4.7 Å) Cite: Conformational rearrangements upon start codon recognition in human 48S translation initiation complex. Nucleic Acids Res., 50, 2022
7QP7	Structure of the human 48S initiation complex in closed state (h48S AUG closed) Descriptor: 18S rRNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ... Authors: Yi, S.-H, Petrychenko, V, Schliep, J.E, Goyal, A, Linden, A, Chari, A, Urlaub, H, Stark, H, Rodnina, M.V, Adio, S, Fischer, N. Deposit date: 2022-01-03 Release date: 2022-05-11 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: Conformational rearrangements upon start codon recognition in human 48S translation initiation complex. Nucleic Acids Res., 50, 2022
6IP8	Cryo-EM structure of the HCV IRES dependently initiated CMV-stalled 80S ribosome (Structure iv) Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ... Authors: Yokoyama, T, Shigematsu, H, Shirouzu, M, Imataka, H, Ito, T. Deposit date: 2018-11-02 Release date: 2019-05-29 Last modified: 2019-11-06 Method: ELECTRON MICROSCOPY (3.9 Å) Cite: HCV IRES Captures an Actively Translating 80S Ribosome. Mol.Cell, 74, 2019
6ND4	Conformational switches control early maturation of the eukaryotic small ribosomal subunit Descriptor: 18S rRNA 5' domain start, 5'ETS rRNA, Bud21, ... Authors: Hunziker, M, Barandun, J, Klinge, S. Deposit date: 2018-12-13 Release date: 2019-06-19 Last modified: 2024-03-20 Method: ELECTRON MICROSCOPY (4.3 Å) Cite: Conformational switches control early maturation of the eukaryotic small ribosomal subunit. Elife, 8, 2019
6ZQF	Cryo-EM structure of the 90S pre-ribosome from Saccharomyces cerevisiae, state Dis-B (Poly-Ala) Descriptor: 18S rRNA, 40S ribosomal protein S1-A, 40S ribosomal protein S11-A, ... Authors: Cheng, J, Lau, B, Venuta, G.L, Berninghausen, O, Hurt, E, Beckmann, R. Deposit date: 2020-07-09 Release date: 2020-09-23 Last modified: 2024-05-01 Method: ELECTRON MICROSCOPY (4.9 Å) Cite: 90 S pre-ribosome transformation into the primordial 40 S subunit. Science, 369, 2020
6IP5	Cryo-EM structure of the CMV-stalled human 80S ribosome (Structure ii) Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ... Authors: Yokoyama, T, Shigematsu, H, Shirouzu, M, Imataka, H, Ito, T. Deposit date: 2018-11-02 Release date: 2019-05-29 Last modified: 2019-11-06 Method: ELECTRON MICROSCOPY (3.9 Å) Cite: HCV IRES Captures an Actively Translating 80S Ribosome. Mol.Cell, 74, 2019
6QDV	Human post-catalytic P complex spliceosome Descriptor: 116 kDa U5 small nuclear ribonucleoprotein component, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent RNA helicase DHX8, ... Authors: Fica, S.M, Oubridge, C, Wilkinson, M.E, Newman, A.J, Nagai, K. Deposit date: 2019-01-03 Release date: 2019-02-20 Last modified: 2024-05-15 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: A human postcatalytic spliceosome structure reveals essential roles of metazoan factors for exon ligation. Science, 363, 2019
8F2I	P53 monomer structure Descriptor: Cellular tumor antigen p53 Authors: Solares, M, Kelly, D.F. Deposit date: 2022-11-08 Release date: 2022-11-23 Last modified: 2024-05-01 Method: ELECTRON MICROSCOPY (5 Å) Cite: High-Resolution Imaging of Human Cancer Proteins Using Microprocessor Materials. Chembiochem, 23, 2022
8F2H	Wild type P53 dimer structure from human cancer cells Descriptor: Cellular tumor antigen p53 Authors: Solares, M, Kelly, D.F. Deposit date: 2022-11-08 Release date: 2022-11-23 Last modified: 2024-05-01 Method: ELECTRON MICROSCOPY (4.2 Å) Cite: High-Resolution Imaging of Human Cancer Proteins Using Microprocessor Materials. Chembiochem, 23, 2022
6SGC	Rabbit 80S ribosome stalled on a poly(A) tail Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S12, ... Authors: Chandrasekaran, V, Juszkiewicz, S, Choi, J, Puglisi, J.D, Brown, A, Shao, S, Ramakrishnan, V, Hegde, R.S. Deposit date: 2019-08-03 Release date: 2019-12-04 Last modified: 2022-03-30 Method: ELECTRON MICROSCOPY (2.8 Å) Cite: Mechanism of ribosome stalling during translation of a poly(A) tail. Nat.Struct.Mol.Biol., 26, 2019

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