3E2E
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![BU of 3e2e by Molmil](/molmil-images/mine/3e2e) | Crystal Structure of an Intermediate Complex of T7 RNAP and 7nt of RNA | Descriptor: | DNA (28-MER), DNA (31-MER), DNA-directed RNA polymerase, ... | Authors: | Durniak, K.J, Bailey, S, Steitz, T.A. | Deposit date: | 2008-08-05 | Release date: | 2008-11-04 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (3 Å) | Cite: | The structure of a transcribing t7 RNA polymerase in transition from initiation to elongation Science, 322, 2008
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4CLQ
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![BU of 4clq by Molmil](/molmil-images/mine/4clq) | Structure of Rcl1p - Bms1p complex | Descriptor: | RIBOSOME BIOGENESIS PROTEIN BMS1, RNA 3'-TERMINAL PHOSPHATE CYCLASE-LIKE PROTEIN | Authors: | Fribourg, S. | Deposit date: | 2014-01-15 | Release date: | 2014-11-26 | Last modified: | 2017-08-23 | Method: | X-RAY DIFFRACTION (2.02 Å) | Cite: | Crucial Role of the Rcl1P-Bms1P Interaction for Yeast Pre-Ribosomal RNA Processing. Nucleic Acids Res., 42, 2014
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1F85
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![BU of 1f85 by Molmil](/molmil-images/mine/1f85) | SOLUTION STRUCTURE OF HCV IRES RNA DOMAIN IIIE | Descriptor: | HCV-1B IRES RNA DOMAIN IIIE | Authors: | Lukavsky, P.J, Otto, G.A, Lancaster, A.M, Sarnow, P, Puglisi, J.D. | Deposit date: | 2000-06-28 | Release date: | 2000-11-17 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Structures of two RNA domains essential for hepatitis C virus internal ribosome entry site function. Nat.Struct.Biol., 7, 2000
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2IP1
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![BU of 2ip1 by Molmil](/molmil-images/mine/2ip1) | |
4MS9
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![BU of 4ms9 by Molmil](/molmil-images/mine/4ms9) | Native RNA-10mer Structure: ccggcgccgg | Descriptor: | Native RNA duplex 10mer, STRONTIUM ION | Authors: | Sheng, J, Li, L, Engelhart, A.E, Gan, J, Wang, J, Szostak, J.W. | Deposit date: | 2013-09-18 | Release date: | 2014-02-12 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (1.32 Å) | Cite: | Structural insights into the effects of 2'-5' linkages on the RNA duplex. Proc.Natl.Acad.Sci.USA, 111, 2014
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1ZBN
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![BU of 1zbn by Molmil](/molmil-images/mine/1zbn) | |
1F84
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![BU of 1f84 by Molmil](/molmil-images/mine/1f84) | SOLUTION STRUCTURE OF HCV IRES RNA DOMAIN IIID | Descriptor: | HCV-1B IRES RNA DOMAIN IIID | Authors: | Lukavsky, P.J, Otto, G.A, Lancaster, A.M, Sarnow, P, Puglisi, J.D. | Deposit date: | 2000-06-28 | Release date: | 2000-11-17 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Structures of two RNA domains essential for hepatitis C virus internal ribosome entry site function. Nat.Struct.Biol., 7, 2000
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3LRR
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![BU of 3lrr by Molmil](/molmil-images/mine/3lrr) | Crystal structure of human RIG-I CTD bound to a 12 bp AU rich 5' ppp dsRNA | Descriptor: | Probable ATP-dependent RNA helicase DDX58, RNA (5'-R(*(ATP)P*UP*AP*UP*AP*UP*AP*UP*AP*UP*AP*U)-3'), ZINC ION | Authors: | Li, P. | Deposit date: | 2010-02-11 | Release date: | 2010-06-02 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (2.15 Å) | Cite: | The Structural Basis of 5' Triphosphate Double-Stranded RNA Recognition by RIG-I C-Terminal Domain. Structure, 18, 2010
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3CIY
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![BU of 3ciy by Molmil](/molmil-images/mine/3ciy) | Mouse Toll-like receptor 3 ectodomain complexed with double-stranded RNA | Descriptor: | 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... | Authors: | Liu, L, Botos, I, Wang, Y, Leonard, J.N, Shiloach, J, Segal, D.M, Davies, D.R. | Deposit date: | 2008-03-12 | Release date: | 2008-05-06 | Last modified: | 2023-08-30 | Method: | X-RAY DIFFRACTION (3.41 Å) | Cite: | Structural basis of toll-like receptor 3 signaling with double-stranded RNA. Science, 320, 2008
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1C9S
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![BU of 1c9s by Molmil](/molmil-images/mine/1c9s) | CRYSTAL STRUCTURE OF A COMPLEX OF TRP RNA-BINDING ATTENUATION PROTEIN WITH A 53-BASE SINGLE STRANDED RNA CONTAINING ELEVEN GAG TRIPLETS SEPARATED BY AU DINUCLEOTIDES | Descriptor: | SINGLE STRANDED RNA (55-MER), TRP RNA-BINDING ATTENUATION PROTEIN, TRYPTOPHAN | Authors: | Antson, A.A, Dodson, E.J, Dodson, G.G, Greaves, R.B, Chen, X.-P, Gollnick, P. | Deposit date: | 1999-08-03 | Release date: | 1999-09-15 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Structure of the trp RNA-binding attenuation protein, TRAP, bound to RNA. Nature, 401, 1999
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3LRN
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![BU of 3lrn by Molmil](/molmil-images/mine/3lrn) | Crystal structure of human RIG-I CTD bound to a 14 bp GC 5' ppp dsRNA | Descriptor: | Probable ATP-dependent RNA helicase DDX58, RNA (5'-R(*(GTP)P*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP*C)-3'), ZINC ION | Authors: | Li, P. | Deposit date: | 2010-02-11 | Release date: | 2010-06-02 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (2.6 Å) | Cite: | The Structural Basis of 5' Triphosphate Double-Stranded RNA Recognition by RIG-I C-Terminal Domain. Structure, 18, 2010
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3JB6
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![BU of 3jb6 by Molmil](/molmil-images/mine/3jb6) | In situ structures of the segmented genome and RNA polymerase complex inside a dsRNA virus | Descriptor: | GUANOSINE-5'-TRIPHOSPHATE, RNA-dependent RNA polymerase, VP1 CSP, ... | Authors: | Zhang, X, Ding, K, Yu, X.K, Chang, W, Sun, J.C, Zhou, Z.H. | Deposit date: | 2015-08-02 | Release date: | 2015-10-28 | Last modified: | 2024-05-15 | Method: | ELECTRON MICROSCOPY (3.3 Å) | Cite: | In situ structures of the segmented genome and RNA polymerase complex inside a dsRNA virus. Nature, 527, 2015
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2VS1
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![BU of 2vs1 by Molmil](/molmil-images/mine/2vs1) | The crystal structure of Pyrococcus abyssi tRNA (uracil-54, C5)- methyltransferase in complex with S-adenosyl-L-homocysteine | Descriptor: | PHOSPHATE ION, S-ADENOSYL-L-HOMOCYSTEINE, UNCHARACTERIZED RNA METHYLTRANSFERASE PYRAB10780 | Authors: | Walbott, H, Leulliot, N, Grosjean, H, Golinelli-Pimpaneau, B. | Deposit date: | 2008-04-17 | Release date: | 2008-08-05 | Last modified: | 2017-07-12 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | The Crystal Structure of Pyrococcus Abyssi tRNA (Uracil-54, C5)-Methyltransferase Provides Insights Into its tRNA Specificity. Nucleic Acids Res., 36, 2008
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3E3J
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![BU of 3e3j by Molmil](/molmil-images/mine/3e3j) | Crystal Structure of an Intermediate Complex of T7 RNAP and 8nt of RNA | Descriptor: | DNA (28-MER), DNA (5'-D(*DTP*DAP*DAP*DTP*DAP*DCP*DGP*DAP*DCP*DTP*DCP*DAP*DCP*DTP*DAP*DTP*DAP*DTP*DTP*DTP*DCP*DTP*DGP*DCP*DCP*DAP*DAP*DAP*DCP*DGP*DGP*DC)-3'), DNA-directed RNA polymerase, ... | Authors: | Durniak, K.J, Bailey, S, Steitz, T.A. | Deposit date: | 2008-08-07 | Release date: | 2008-11-04 | Last modified: | 2023-08-30 | Method: | X-RAY DIFFRACTION (6.7 Å) | Cite: | The structure of a transcribing t7 RNA polymerase in transition from initiation to elongation Science, 322, 2008
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6HAU
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![BU of 6hau by Molmil](/molmil-images/mine/6hau) | KSHV PAN RNA Mta-response element fragment complexed with the globular domain of herpesvirus saimiri ORF57 | Descriptor: | ACETATE ION, MRE fragment of PAN RNA, ZINC ION, ... | Authors: | Tunnicliffe, R.B, Levy, C, Ruiz Nivia, H.D, Sandri-Goldin, R.M, Golovanov, A.P. | Deposit date: | 2018-08-08 | Release date: | 2018-11-21 | Last modified: | 2024-05-01 | Method: | X-RAY DIFFRACTION (1.86 Å) | Cite: | Structural identification of conserved RNA binding sites in herpesvirus ORF57 homologs: implications for PAN RNA recognition. Nucleic Acids Res., 47, 2019
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3EF1
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![BU of 3ef1 by Molmil](/molmil-images/mine/3ef1) | |
3V2I
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![BU of 3v2i by Molmil](/molmil-images/mine/3v2i) | |
3EF0
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![BU of 3ef0 by Molmil](/molmil-images/mine/3ef0) | |
4KIT
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![BU of 4kit by Molmil](/molmil-images/mine/4kit) | Crystal structure of human Brr2 in complex with the Prp8 Jab1/MPN domain | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Pre-mRNA-processing-splicing factor 8, ... | Authors: | Wahl, M.C, Wandersleben, T, Santos, K.F. | Deposit date: | 2013-05-02 | Release date: | 2013-06-05 | Last modified: | 2023-09-20 | Method: | X-RAY DIFFRACTION (3.598 Å) | Cite: | Inhibition of RNA helicase Brr2 by the C-terminal tail of the spliceosomal protein Prp8. Science, 341, 2013
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4HKQ
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![BU of 4hkq by Molmil](/molmil-images/mine/4hkq) | XMRV reverse transcriptase in complex with RNA/DNA hybrid | Descriptor: | DNA (5'-D(*TP*GP*GP*AP*AP*TP*CP*A*GP*GP*TP*GP*TP*CP*GP*CP*AP*CP*TP*CP*TP*G)-3'), RNA (5'-R(*AP*AP*CP*AP*GP*AP*GP*UP*GP*CP*GP*AP*CP*AP*CP*CP*UP*GP*AP*UP*UP*CP*CP*AP*U)-3'), Reverse transcriptase/ribonuclease H p80 | Authors: | Nowak, E, Potrzebowski, W, Konarev, P.V, Rausch, J.W, Bona, M.K, Svergun, D.I, Bujnicki, J.M, Le Grice, S.F.J, Nowotny, M. | Deposit date: | 2012-10-15 | Release date: | 2013-02-20 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (3.04 Å) | Cite: | Structural analysis of monomeric retroviral reverse transcriptase in complex with an RNA/DNA hybrid Nucleic Acids Res., 41, 2013
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4HHT
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![BU of 4hht by Molmil](/molmil-images/mine/4hht) | |
3BBM
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![BU of 3bbm by Molmil](/molmil-images/mine/3bbm) | Minimally Junctioned Hairpin Ribozyme Incorporates A38C and 2'O-Me Modification at Active Site | Descriptor: | COBALT HEXAMMINE(III), Loop A Substrate strand, Loop A and Loop B Ribozyme strand, ... | Authors: | MacElrevey, C, Krucinska, J, Wedekind, J.E. | Deposit date: | 2007-11-09 | Release date: | 2008-08-12 | Last modified: | 2023-08-30 | Method: | X-RAY DIFFRACTION (2.65 Å) | Cite: | Structural effects of nucleobase variations at key active site residue Ade38 in the hairpin ribozyme. Rna, 14, 2008
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6XRQ
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![BU of 6xrq by Molmil](/molmil-images/mine/6xrq) | Structural descriptions of ligand interactions to DNA and RNA quadruplexes folded from the non-coding region of Pseudorabies virus | Descriptor: | 2,7-bis[3-(morpholin-4-yl)propyl]-4,9-bis{[3-(morpholin-4-yl)propyl]amino}benzo[lmn][3,8]phenanthroline-1,3,6,8(2H,7H)-tetrone, POTASSIUM ION, RNA (5' GP*GP*CP*UP*CP*GP*GP*CP*GP*GP*CP*GP*GP*A-3') | Authors: | Zhang, Y.S, Parkinson, G.N, Wei, D.G. | Deposit date: | 2020-07-13 | Release date: | 2021-07-28 | Last modified: | 2024-06-26 | Method: | X-RAY DIFFRACTION (1.21 Å) | Cite: | Structural descriptions of ligand interactions to RNA quadruplexes folded from the non-coding region of Pseudorabies virus. Biochimie, 2024
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1MFK
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![BU of 1mfk by Molmil](/molmil-images/mine/1mfk) | Structure of Prokaryotic SECIS mRNA Hairpin | Descriptor: | 5'-R(P*GP*GP*CP*GP*GP*UP*UP*GP*CP*AP*GP*GP*UP*CP*UP*GP*CP*AP*CP*CP*GP*CP*C)-3' | Authors: | Fourmy, D, Guittet, E, Yoshizawa, S. | Deposit date: | 2002-08-12 | Release date: | 2002-11-13 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Structure of Prokaryotic SECIS mRNA Hairpin and its Interaction with Elongation Factor SELB J.Mol.Biol., 324, 2002
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1P16
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![BU of 1p16 by Molmil](/molmil-images/mine/1p16) | Structure of an mRNA capping enzyme bound to the phosphorylated carboxyl-terminal domain of RNA polymerase II | Descriptor: | GUANOSINE-5'-MONOPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, PHOSPHATE ION, ... | Authors: | Fabrega, C, Shen, V, Shuman, S, Lima, C.D. | Deposit date: | 2003-04-11 | Release date: | 2003-07-15 | Last modified: | 2021-10-27 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | Structure of an mRNA capping enzyme bound to the phosphorylated carboxy-terminal domain of RNA polymerase II. Mol.Cell, 11, 2003
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