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7RAN
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BU of 7ran by Molmil
5-HT2AR bound to a novel agonist in complex with a mini-Gq protein and an active-state stabilizing single-chain variable fragment (scFv16) obtained by cryo-electron microscopy (cryoEM)
Descriptor: (3R)-3-methyl-5-(1H-pyrrolo[2,3-b]pyridin-3-yl)-1,2,3,6-tetrahydropyridin-1-ium, 5-hydroxytryptamine receptor 2A, G protein subunit q (Gi2-mini-Gq chimera), ...
Authors:Barros-Alvarez, X, Kim, K, Panova, O, Roth, B.L, Skiniotis, G.
Deposit date:2021-07-02
Release date:2022-07-06
Last modified:2022-11-02
Method:ELECTRON MICROSCOPY (3.45 Å)
Cite:Bespoke library docking for 5-HT 2A receptor agonists with antidepressant activity.
Nature, 610, 2022
6AOW
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BU of 6aow by Molmil
Crystal structure of lectin domain of F9 pilus adhesin FmlH from E. coli UTI89
Descriptor: F9 pilus adhesin FmlH, SULFATE ION
Authors:Kalas, V, Hultgren, S.J.
Deposit date:2017-08-16
Release date:2018-02-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure-based discovery of glycomimetic FmlH ligands as inhibitors of bacterial adhesion during urinary tract infection.
Proc.Natl.Acad.Sci.USA, 115, 2018
6AOX
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BU of 6aox by Molmil
F9 pilus adhesin FmlH lectin domain from E. coli UTI89 co-crystallized with TF antigen
Descriptor: Fml fimbrial adhesin FmlD, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-alpha-D-galactopyranose
Authors:Kalas, V, Hultgren, S.J.
Deposit date:2017-08-16
Release date:2018-02-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure-based discovery of glycomimetic FmlH ligands as inhibitors of bacterial adhesion during urinary tract infection.
Proc.Natl.Acad.Sci.USA, 115, 2018
6ELA
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BU of 6ela by Molmil
Crystal structure of MMP12 in complex with inhibitor BE4.
Descriptor: (2~{S})-2-[2-[4-(4-methoxyphenyl)phenyl]sulfanylphenyl]pentanedioic acid, 1,2-ETHANEDIOL, 1,4-DIETHYLENE DIOXIDE, ...
Authors:Ciccone, L, Tepshi, L, Nuti, E, Rossello, A, Stura, E.A.
Deposit date:2017-09-28
Release date:2018-05-16
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.485 Å)
Cite:Development of Thioaryl-Based Matrix Metalloproteinase-12 Inhibitors with Alternative Zinc-Binding Groups: Synthesis, Potentiometric, NMR, and Crystallographic Studies.
J. Med. Chem., 61, 2018
8OF7
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BU of 8of7 by Molmil
Cyc15 Diels Alderase
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Back, C.R, Barringer, R.W.L, Zorn, K, Manzo-Ruiz, M, Race, P.R.
Deposit date:2023-03-14
Release date:2023-06-21
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Interrogation of an Enzyme Library Reveals the Catalytic Plasticity of Naturally Evolved [4+2] Cyclases.
Chembiochem, 24, 2023
3T25
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BU of 3t25 by Molmil
TMAO-grown orthorhombic trypsin (bovine)
Descriptor: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ...
Authors:Cahn, J, Venkat, M, Marshall, H, Juers, D.
Deposit date:2011-07-22
Release date:2011-12-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The use of trimethylamine N-oxide as a primary precipitating agent and related methylamine osmolytes as cryoprotective agents for macromolecular crystallography.
Acta Crystallogr.,Sect.D, 68, 2012
6AS8
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BU of 6as8 by Molmil
F9 pilus adhesin FmlH lectin domain from E. coli UTI89 co-crystallized with ortho-biphenyl-2'-carboxyl N-acetyl-beta-galactosaminoside
Descriptor: Fml fimbrial adhesin FmlD, ortho-biphenyl-2'-carboxyl N-acetyl-beta-galactosaminoside
Authors:Kalas, V, Hultgren, S.J.
Deposit date:2017-08-23
Release date:2018-02-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:Structure-based discovery of glycomimetic FmlH ligands as inhibitors of bacterial adhesion during urinary tract infection.
Proc.Natl.Acad.Sci.USA, 115, 2018
4DY8
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BU of 4dy8 by Molmil
Interactions of Mn2+ with a non-self-complementary Z-type DNA duplex
Descriptor: DNA (5'-D(*CP*AP*CP*GP*CP*G)-3'), DNA (5'-D(*CP*GP*CP*GP*TP*G)-3'), DNA (5'-D(P*TP*G)-3'), ...
Authors:Mandal, P.K, Venkadesh, S, Gautham, N.
Deposit date:2012-02-28
Release date:2012-11-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Interactions of Mn(2+) with a non-self-complementary Z-type DNA duplex
Acta Crystallogr.,Sect.F, 68, 2012
5COD
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BU of 5cod by Molmil
Bovine heart complex I membrane domain
Descriptor: NADH-ubiquinone oxidoreductase chain 4, NADH-ubiquinone oxidoreductase chain 5, SDAP, ...
Authors:Zhu, J, Hirst, J, King, M.S, Yu, M, Leslie, A.G.W, Klipcan, L.
Deposit date:2015-07-20
Release date:2015-09-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (6.74 Å)
Cite:Structure of subcomplex I beta of mammalian respiratory complex I leads to new supernumerary subunit assignments.
Proc.Natl.Acad.Sci.USA, 112, 2015
1QZN
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BU of 1qzn by Molmil
Crystal Structure Analysis of a type II cohesin domain from the cellulosome of Acetivibrio cellulolyticus
Descriptor: cellulosomal scaffoldin adaptor protein B
Authors:Frolow, F, Noach, I, Rosenheck, S, Lamed, R, Qi, X, Shimon, L.J.W, Bayer, E.A.
Deposit date:2003-09-17
Release date:2004-09-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of a type-II cohesin module from the Bacteroides cellulosolvens cellulosome reveals novel and distinctive secondary structural elements.
J.Mol.Biol., 348, 2005
7E1L
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BU of 7e1l by Molmil
Crystal structure of apo form PhlH
Descriptor: DUF1956 domain-containing protein
Authors:Zhang, N, Wu, J, He, Y.X, Ge, H.
Deposit date:2021-02-01
Release date:2022-02-02
Last modified:2022-08-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Molecular basis for coordinating secondary metabolite production by bacterial and plant signaling molecules.
J.Biol.Chem., 298, 2022
6ARO
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BU of 6aro by Molmil
F9 pilus adhesin FmlH lectin domain from E. coli UTI89 co-crystallized with 8-hydroxyquinoline beta-galactoside
Descriptor: 8-hydroxyquinoline beta-galactopyranoside, F9 pilus adhesin FmlH, SULFATE ION
Authors:Kalas, V, Hultgren, S.J.
Deposit date:2017-08-23
Release date:2018-02-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structure-based discovery of glycomimetic FmlH ligands as inhibitors of bacterial adhesion during urinary tract infection.
Proc.Natl.Acad.Sci.USA, 115, 2018
6B9E
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BU of 6b9e by Molmil
Human ATL1 mutant - R77A / F151S bound to GDP
Descriptor: Atlastin-1, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:O'Donnell, J.P, Sondermann, H.
Deposit date:2017-10-10
Release date:2017-12-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:A hereditary spastic paraplegia-associated atlastin variant exhibits defective allosteric coupling in the catalytic core.
J. Biol. Chem., 293, 2018
7E1N
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BU of 7e1n by Molmil
Crystal structure of PhlH in complex with 2,4-diacetylphloroglucinol
Descriptor: 2,4-bis[(1R)-1-oxidanylethyl]benzene-1,3,5-triol, DUF1956 domain-containing protein
Authors:Zhang, N, Wu, J, He, Y.X, Ge, H.
Deposit date:2021-02-02
Release date:2022-02-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular basis for coordinating secondary metabolite production by bacterial and plant signaling molecules.
J.Biol.Chem., 298, 2022
7AHP
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BU of 7ahp by Molmil
Crystal structure of Ixodes ricinus serpin - Iripin-3
Descriptor: Putative salivary serpin, TRIS-HYDROXYMETHYL-METHYL-AMMONIUM
Authors:Kascakova, B, Kuta Smatanova, I, Prudnikova, T.
Deposit date:2020-09-25
Release date:2021-03-10
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Iripin-3, a New Salivary Protein Isolated From Ixodes ricinus Ticks, Displays Immunomodulatory and Anti-Hemostatic Properties In Vitro
Front Immunol, 12, 2021
6AOY
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BU of 6aoy by Molmil
F9 pilus adhesin FmlH lectin domain from E. coli UTI89 co-crystallized with o-nitrophenyl beta-galactoside (ONPG)
Descriptor: 2-nitrophenyl beta-D-galactopyranoside, Fml fimbrial adhesin FmlD, SULFATE ION
Authors:Kalas, V, Hultgren, S.J.
Deposit date:2017-08-16
Release date:2018-02-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure-based discovery of glycomimetic FmlH ligands as inhibitors of bacterial adhesion during urinary tract infection.
Proc.Natl.Acad.Sci.USA, 115, 2018
6B9D
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BU of 6b9d by Molmil
Human ATL1 mutant - R77A bound to GDP
Descriptor: Atlastin-1, GLYCEROL, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:O'Donnell, J.P, Sondermann, H.
Deposit date:2017-10-10
Release date:2017-12-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:A hereditary spastic paraplegia-associated atlastin variant exhibits defective allosteric coupling in the catalytic core.
J. Biol. Chem., 293, 2018
2IY5
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BU of 2iy5 by Molmil
PHENYLALANYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS complexed with tRNA and a phenylalanyl-adenylate analog
Descriptor: ADENOSINE-5'-[PHENYLALANINOL-PHOSPHATE], MAGNESIUM ION, PHENYLALANYL-TRNA SYNTHETASE ALPHA CHAIN, ...
Authors:Moor, N, Kotik-Kogan, O, Tworowski, D, Sukhanova, M, Safro, M.
Deposit date:2006-07-12
Release date:2006-09-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:The crystal structure of the ternary complex of phenylalanyl-tRNA synthetase with tRNAPhe and a phenylalanyl-adenylate analogue reveals a conformational switch of the CCA end.
Biochemistry, 45, 2006
3T2A
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BU of 3t2a by Molmil
TMAO-grown cubic insulin (porcine)
Descriptor: Insulin A chain, Insulin B chain, trimethylamine oxide
Authors:Cahn, J, Venkat, M, Marshall, H, Juers, D.
Deposit date:2011-07-22
Release date:2011-12-28
Last modified:2012-01-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The use of trimethylamine N-oxide as a primary precipitating agent and related methylamine osmolytes as cryoprotective agents for macromolecular crystallography.
Acta Crystallogr.,Sect.D, 68, 2012
4DWY
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BU of 4dwy by Molmil
Interactions of Mn2+ with a non-self-complementary Z-type DNA duplex
Descriptor: DNA (5'-D(*CP*AP*CP*GP*CP*G)-3'), DNA (5'-D(*CP*GP*CP*GP*TP*G)-3'), MANGANESE (II) ION
Authors:Mandal, P.K, Venkadesh, S, Gautham, N.
Deposit date:2012-02-27
Release date:2012-11-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Interactions of Mn(2+) with a non-self-complementary Z-type DNA duplex
Acta Crystallogr.,Sect.F, 68, 2012
6FK3
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BU of 6fk3 by Molmil
Structure and function of aldehyde dehydrogenase from Thermus thermophilus: An enzyme with an evolutionarily-distinct C-terminal arm (Recombinant full-length protein in complex with propanal)
Descriptor: 3[N-MORPHOLINO]PROPANE SULFONIC ACID, Aldehyde dehydrogenase, DI(HYDROXYETHYL)ETHER, ...
Authors:Hayes, K.A, Noor, M.R, Djeghader, A, Soulimane, T.
Deposit date:2018-01-23
Release date:2018-09-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The quaternary structure of Thermus thermophilus aldehyde dehydrogenase is stabilized by an evolutionary distinct C-terminal arm extension.
Sci Rep, 8, 2018
6ESM
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BU of 6esm by Molmil
Crystal structure of MMP9 in complex with inhibitor BE4.
Descriptor: (2~{S})-2-[2-[4-(4-methoxyphenyl)phenyl]sulfanylphenyl]pentanedioic acid, CALCIUM ION, Matrix metalloproteinase-9,Matrix metalloproteinase-9, ...
Authors:Ciccone, L, Tepshi, L, Nuti, E, Rossello, A, Stura, E.A.
Deposit date:2017-10-23
Release date:2018-05-16
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.104 Å)
Cite:Development of Thioaryl-Based Matrix Metalloproteinase-12 Inhibitors with Alternative Zinc-Binding Groups: Synthesis, Potentiometric, NMR, and Crystallographic Studies.
J. Med. Chem., 61, 2018
5T4G
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BU of 5t4g by Molmil
Crystal structure of BhGH81 in complex with laminarin
Descriptor: 1,2-ETHANEDIOL, Glycoside Hydrolase, PHOSPHATE ION, ...
Authors:Pluvinage, B, Boraston, A.B.
Deposit date:2016-08-29
Release date:2017-06-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Analysis of a Family 81 Glycoside Hydrolase Implicates Its Recognition of beta-1,3-Glucan Quaternary Structure.
Structure, 25, 2017
6B9F
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BU of 6b9f by Molmil
Human ATL1 mutant - F151S bound to GDPAlF4-
Descriptor: Atlastin-1, GLYCEROL, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:O'Donnell, J.P, Sondermann, H.
Deposit date:2017-10-10
Release date:2017-12-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A hereditary spastic paraplegia-associated atlastin variant exhibits defective allosteric coupling in the catalytic core.
J. Biol. Chem., 293, 2018
8JTJ
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BU of 8jtj by Molmil
Cryo-EM structure of GeoCas9-sgRNA-dsDNA ternary complex
Descriptor: CRISPR-associated endonuclease Cas9, DNA (29-MER), DNA (5'-D(P*GP*GP*GP*CP*GP*CP*GP*AP*A)-3'), ...
Authors:Shen, P.P, Liu, B.B, Li, X, Zhang, L.L, Chen, C.-C, Guo, R.-T.
Deposit date:2023-06-21
Release date:2024-06-05
Method:ELECTRON MICROSCOPY (3.08 Å)
Cite:Cryo-EM structure of GeoCas9-sgRNA-DNA ternary complex
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