Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7QDX
DownloadVisualize
BU of 7qdx by Molmil
bacterial IMPDH chimera
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Inosine-5'-monophosphate dehydrogenase, MAGNESIUM ION
Authors:Labesse, G, Gelin, M, Munier-Lehmann, H, Gedeon, A, Haouz, A.
Deposit date:2021-11-30
Release date:2023-06-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Insight into the role of the Bateman domain at the molecular and physiological levels through engineered IMP dehydrogenases.
Protein Sci., 32, 2023
6NWR
DownloadVisualize
BU of 6nwr by Molmil
Thioester acyl-intermediate of Apolipoprotein N-acyltransferase (Lnt)
Descriptor: Apolipoprotein N-acyltransferase, DODECANE, DODECYL-BETA-D-MALTOSIDE
Authors:Wiseman, B, Hogbom, M.
Deposit date:2019-02-07
Release date:2020-01-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Conformational changes in Apolipoprotein N-acyltransferase (Lnt).
Sci Rep, 10, 2020
5DCZ
DownloadVisualize
BU of 5dcz by Molmil
Tankyrase 2 complexed with a selective inhibitor
Descriptor: PHOSPHATE ION, Tankyrase-2, ZINC ION, ...
Authors:Shewchuk, L.M, Muelbaier, M.
Deposit date:2015-08-24
Release date:2016-09-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Discovery of a new tool compound with superior selectivity to interrogate the biology of Tankyrase
J.Med.Chem, 2015
5DFG
DownloadVisualize
BU of 5dfg by Molmil
Crystal structure of C-As lyase with mutations Y100H and V102F
Descriptor: Glyoxalase/bleomycin resistance protein/dioxygenase
Authors:Venkadesh, S, Yoshinaga, M, Kandavelu, P, Sankaran, B, Rosen, B.P.
Deposit date:2015-08-26
Release date:2016-09-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9711 Å)
Cite:Crystal structure of C-As lyase with mutations Y100H and F102V
To Be Published
5DII
DownloadVisualize
BU of 5dii by Molmil
Structure of an engineered bacterial microcompartment shell protein binding a [4Fe-4S] cluster
Descriptor: IRON/SULFUR CLUSTER, Microcompartments protein
Authors:Sutter, M, Aussignargues, C, Turmo, A, Kerfeld, C.A.
Deposit date:2015-09-01
Release date:2016-02-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.804 Å)
Cite:Structure and Function of a Bacterial Microcompartment Shell Protein Engineered to Bind a [4Fe-4S] Cluster.
J.Am.Chem.Soc., 138, 2016
8JUT
DownloadVisualize
BU of 8jut by Molmil
rat megalin RAP complex
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Goto, S, Tsutsumi, A, Lee, Y, Hosojima, M, Kabasawa, H, Komochi, K, Yun-san, L, Nagatoshi, S, Tsumoto, K, Nishizawa, T, Kikkawa, M, Saito, A.
Deposit date:2023-06-27
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Cryo-EM structures elucidate the multiligand receptor nature of megalin.
Proc.Natl.Acad.Sci.USA, 121, 2024
6NC2
DownloadVisualize
BU of 6nc2 by Molmil
AMC011 v4.2 SOSIP Env trimer in complex with fusion peptide targeting antibody ACS202 fragment antigen binding
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, AMC011 v4.2 SOSIP gp120, ...
Authors:Cottrell, C.A, Ozorowski, G, Yuan, M, Copps, J, Wilson, I.A, Ward, A.B.
Deposit date:2018-12-10
Release date:2019-06-19
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (5.2 Å)
Cite:Conformational Plasticity in the HIV-1 Fusion Peptide Facilitates Recognition by Broadly Neutralizing Antibodies.
Cell Host Microbe, 25, 2019
7RSO
DownloadVisualize
BU of 7rso by Molmil
AMC016 SOSIP.v4.2 in complex with PGV04 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, AMC016 gp120, ...
Authors:Bader, D.L.V, Cottrell, C.A, Ward, A.B.
Deposit date:2021-08-11
Release date:2021-09-15
Last modified:2022-01-26
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:The Glycan Hole Area of HIV-1 Envelope Trimers Contributes Prominently to the Induction of Autologous Neutralization.
J.Virol., 96, 2022
5E4A
DownloadVisualize
BU of 5e4a by Molmil
Human transthyretin (TTR) complexed with (2,7-Dichloro-fluoren-9-ylideneaminooxy)-acetic acid.
Descriptor: Transthyretin, {[(2,7-dichloro-9H-fluoren-9-ylidene)amino]oxy}acetic acid
Authors:Ciccone, L, Nencetti, S, Rossello, A, Orlandini, E, Stura, E.A.
Deposit date:2015-10-05
Release date:2016-03-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Synthesis and structural analysis of halogen substituted fibril formation inhibitors of Human Transthyretin (TTR).
J Enzyme Inhib Med Chem, 31, 2016
8JUU
DownloadVisualize
BU of 8juu by Molmil
rat megalin
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Goto, S, Tsutsumi, A, Lee, Y, Hosojima, M, Kabasawa, H, Komochi, K, Yun-san, L, Nagatoshi, S, Tsumoto, K, Nishizawa, T, Kikkawa, M, Saito, A.
Deposit date:2023-06-27
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Cryo-EM structures elucidate the multiligand receptor nature of megalin.
Proc.Natl.Acad.Sci.USA, 121, 2024
6NOZ
DownloadVisualize
BU of 6noz by Molmil
X-ray structure of PEDV papain-like protease 2
Descriptor: GLYCEROL, Polyprotein, ZINC ION
Authors:Clasman, J.C, Mesecar, A.D, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-01-16
Release date:2020-01-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Evaluating ubiquitin specificity of papain-like protease 2 from alphacoronaviruses FIPV and PEDV using structure-guided engineering
To Be Published
6O0E
DownloadVisualize
BU of 6o0e by Molmil
Saxiphilin:STX complex, soaking
Descriptor: Saxiphilin, [(3aS,4R,10aS)-2,6-diamino-10,10-dihydroxy-3a,4,9,10-tetrahydro-3H,8H-pyrrolo[1,2-c]purin-4-yl]methyl carbamate
Authors:Yen, T.J, Lolicato, M, Minor, D.L.
Deposit date:2019-02-16
Release date:2019-07-10
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the saxiphilin:saxitoxin (STX) complex reveals a convergent molecular recognition strategy for paralytic toxins.
Sci Adv, 5, 2019
5DTR
DownloadVisualize
BU of 5dtr by Molmil
Crystal structure of Dot1L in complex with inhibitor CPD5 [N-(2,6-dichlorophenyl)-4-methoxy-N-methylquinolin-6-amine]
Descriptor: Histone-lysine N-methyltransferase, H3 lysine-79 specific, N-(2,6-dichlorophenyl)-4-methoxy-N-methylquinolin-6-amine
Authors:Scheufler, C, Be, C, Moebitz, H, Stauffer, F.
Deposit date:2015-09-18
Release date:2016-06-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Optimization of a Fragment-Based Screening Hit toward Potent DOT1L Inhibitors Interacting in an Induced Binding Pocket.
Acs Med.Chem.Lett., 7, 2016
5E7T
DownloadVisualize
BU of 5e7t by Molmil
Structure of the tripod (BppUct-A-L) from the baseplate of bacteriophage Tuc2009
Descriptor: CALCIUM ION, Major structural protein 1, Minor structural protein 4, ...
Authors:Legrand, P, Collins, B, Blangy, S, Murphy, J, Spinelli, S, Gutierrez, C, Richet, N, Kellenberger, C, Desmyter, A, Mahony, J, van Sinderen, D, Cambillau, C.
Deposit date:2015-10-13
Release date:2015-12-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The Atomic Structure of the Phage Tuc2009 Baseplate Tripod Suggests that Host Recognition Involves Two Different Carbohydrate Binding Modules.
Mbio, 7, 2016
7PZH
DownloadVisualize
BU of 7pzh by Molmil
Phocaeicola vulgatus sialic acid esterase at 2.06 Angstrom resolution
Descriptor: Lysophospholipase L1, MAGNESIUM ION
Authors:Scott, H, Armstrong, Z, Davies, G.J.
Deposit date:2021-10-12
Release date:2022-05-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:The structure of Phocaeicola vulgatus sialic acid acetylesterase.
Acta Crystallogr D Struct Biol, 78, 2022
8K5S
DownloadVisualize
BU of 8k5s by Molmil
The structure of EntE with 3-(prop-2-yn-1-yloxy)benzoic acid sulfamoyl adenosine
Descriptor: Enterobactin synthase component E, [(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl ~{N}-(3-prop-2-ynoxyphenyl)carbonylsulfamate
Authors:Miyanaga, A, Ishikawa, F.
Deposit date:2023-07-24
Release date:2024-07-31
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Reprogrammed aryl acid adenylation domain with an enlarged substrate binding pocket
To be published
8K5T
DownloadVisualize
BU of 8k5t by Molmil
The structure of EntE with2-methyl-3-chloro-benzoic acid sulfamoyl adenosine
Descriptor: Enterobactin synthase component E, [(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl ~{N}-(3-chloranyl-2-methyl-phenyl)carbonylsulfamate
Authors:Miyanaga, A, Ishikawa, F.
Deposit date:2023-07-24
Release date:2024-07-31
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Reprogrammed aryl acid adenylation domain with an enlarged substrate binding pocket
To be published
5EBW
DownloadVisualize
BU of 5ebw by Molmil
KcsA with G77ester mutation
Descriptor: Antibody Fab Fragment Light Chain, DIACYL GLYCEROL, NONAN-1-OL, ...
Authors:Matulef, K, Valiyaveetil, F.I.
Deposit date:2015-10-19
Release date:2016-04-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Individual Ion Binding Sites in the K(+) Channel Play Distinct Roles in C-type Inactivation and in Recovery from Inactivation.
Structure, 24, 2016
5SUH
DownloadVisualize
BU of 5suh by Molmil
The structure of double ringed trimeric shell protein MSM0271 from the RMM microcompartment
Descriptor: MSM0271 protein
Authors:Mallette, E, Kimber, M.S.
Deposit date:2016-08-03
Release date:2016-12-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A Complete Structural Inventory of the Mycobacterial Microcompartment Shell Proteins Constrains Models of Global Architecture and Transport.
J. Biol. Chem., 292, 2017
6NQ0
DownloadVisualize
BU of 6nq0 by Molmil
Cryo-EM structure of human TPC2 channel in the ligand-bound open state
Descriptor: (2R)-3-{[(S)-hydroxy{[(1S,2R,3R,4S,5S,6R)-2,4,6-trihydroxy-3,5-bis(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}propane-1,2-diyl dioctanoate, Two pore calcium channel protein 2
Authors:She, J, Zeng, W, Guo, J, Chen, Q, Bai, X, Jiang, Y.
Deposit date:2019-01-18
Release date:2019-03-27
Last modified:2019-11-20
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural mechanisms of phospholipid activation of the human TPC2 channel.
Elife, 8, 2019
6NQW
DownloadVisualize
BU of 6nqw by Molmil
Flagellar protein FcpA from Leptospira biflexa - hexagonal form
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Flagellar coiling protein A, GLYCEROL, ...
Authors:San Martin, F, Trajtenberg, F, Larrieux, N, Buschiazzo, A.
Deposit date:2019-01-22
Release date:2020-01-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:An asymmetric sheath controls flagellar supercoiling and motility in the Leptospira spirochete
Elife, 9, 2020
6NTD
DownloadVisualize
BU of 6ntd by Molmil
Crystal Structure of G12V HRas-GppNHp bound in complex with the engineered RBD variant 12 of CRAF Kinase protein
Descriptor: GTPase HRas, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
Authors:Maisonneuve, P, Kurinov, I, Wiechmann, S, Ernst, A, Sicheri, F.
Deposit date:2019-01-28
Release date:2020-03-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Conformation-specific inhibitors of activated Ras GTPases reveal limited Ras dependency of patient-derived cancer organoids.
J.Biol.Chem., 295, 2020
8K8M
DownloadVisualize
BU of 8k8m by Molmil
Crystallographic structure of Lysozyme C from chicken
Descriptor: GLYCEROL, Lysozyme C
Authors:Zheng, P, Shang, G, Jin, J, He, L.
Deposit date:2023-07-31
Release date:2024-08-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystallographic structure of Lysozyme C from chicken
To Be Published
5DUW
DownloadVisualize
BU of 5duw by Molmil
Crystal structure of the human galectin-4 N-terminal carbohydrate recognition domain in complex with lactose-3'-sulfate
Descriptor: 3-O-sulfo-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, Galectin-4
Authors:Bum-Erdene, K, Blanchard, H.
Deposit date:2015-09-21
Release date:2016-02-17
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural characterisation of human galectin-4 N-terminal carbohydrate recognition domain in complex with glycerol, lactose, 3'-sulfo-lactose, and 2'-fucosyllactose.
Sci Rep, 6, 2016
6NP6
DownloadVisualize
BU of 6np6 by Molmil
Crystal structure of the sensor domain of the transcriptional regulator HcpR from Porphyromonas Gingivalis
Descriptor: Crp/Fnr family transcriptional regulator, GLYCEROL
Authors:Musayev, F.N, Belvin, B.R, Escalante, C.R, Turner, J, Scarsdale, J.N, Lewis, J.P.
Deposit date:2019-01-17
Release date:2019-06-26
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Nitrosative Stress Sensing in Porphyromonas gingivalis: Structure and Mechanisms of the Heme Binding Transcriptional Regulator HcpR.
Acta Crystallogr D Struct Biol, 75, 2019

224201

건을2024-08-28부터공개중

PDB statisticsPDBj update infoContact PDBjnumon