PDB Search results for query - 일본 단백질구조 데이터 뱅크

PDB: 224572 results Info pages Status search Chemie search BIRD

p38alpha MAP kinase bound to MPAQ
Descriptor:	Mitogen-activated protein kinase 14, N-(3-{[7-METHOXY-6-(2-PYRROLIDIN-1-YLETHOXY)QUINAZOLIN-4-YL]AMINO}-4-METHYLPHENYL)-2-MORPHOLIN-4-YLISONICOTINAMIDE
Authors:	Gerhardt, S, Breed, J, Pauptit, R.A, Read, J, Norman, R.A, Ward, W.H.
Deposit date:	2005-10-14
Release date:	2005-12-06
Last modified:	2024-02-14
Method:	X-RAY DIFFRACTION (2.2 Å)
Cite:	Prevention of MKK6-Dependent Activation by Binding to p38alpha MAP Kinase Biochemistry, 44, 2005

2BAL

p38alpha MAP kinase bound to pyrazoloamine
Descriptor:	Mitogen-activated protein kinase 14, [5-AMINO-1-(4-FLUOROPHENYL)-1H-PYRAZOL-4-YL][3-(PIPERIDIN-4-YLOXY)PHENYL]METHANONE
Authors:	Gerhardt, S, Pauptit, R.A, Read, J, Tucker, J, Norman, R.A, Breed, J.
Deposit date:	2005-10-14
Release date:	2005-12-06
Last modified:	2011-07-13
Method:	X-RAY DIFFRACTION (2.1 Å)
Cite:	Prevention of MKK6-Dependent Activation by Binding to p38alpha MAP Kinase. Biochemistry, 44, 2005

2BAM

RESTRICTION ENDONUCLEASE BAMHI COMPLEX WITH DNA AND CALCIUM IONS (PRE-REACTIVE COMPLEX).
Descriptor:	CALCIUM ION, DNA (5'-D(TPAPTPGPGPAPTPCPCPAPTPA)-3'), PROTEIN (ENDONUCLEASE BAMHI)
Authors:	Viadiu, H, Aggarwal, A.K.
Deposit date:	1998-08-19
Release date:	1999-10-31
Last modified:	2023-08-23
Method:	X-RAY DIFFRACTION (2 Å)
Cite:	The role of metals in catalysis by the restriction endonuclease BamHI. Nat.Struct.Biol., 5, 1998

2BAN

Crystal structure of HIV-1 reverse transcriptase (RT) in complex with JANSSEN-R157208
Descriptor:	5-ETHYL-3-[(2-METHOXYETHYL)METHYLAMINO]-6-METHYL-4-(3-METHYLBENZYL)PYRIDIN-2(1H)-ONE, MANGANESE (II) ION, Reverse transcriptase P51 subunit, ...
Authors:	Das, K, Arnold, E.
Deposit date:	2005-10-14
Release date:	2005-12-06
Last modified:	2023-08-23
Method:	X-RAY DIFFRACTION (2.95 Å)
Cite:	Crystal Structures for HIV-1 Reverse Transcriptase in Complexes with Three Pyridinone Derivatives: A New Class of Non-Nucleoside Inhibitors Effective against a Broad Range of Drug-Resistant Strains. J.Med.Chem., 48, 2005

2BAO

Solution NMR structure of the myristoylated N-terminal fragment of Arf6
Descriptor:	ADP-ribosylation factor 6, MYRISTIC ACID
Authors:	Gizachew, D.
Deposit date:	2005-10-14
Release date:	2006-07-25
Last modified:	2022-03-09
Method:	SOLUTION NMR
Cite:	NMR structural studies of the myristoylated N-terminus of ADP ribosylation factor 6 (Arf6). Febs Lett., 580, 2006

2BAP

Crystal structure of the N-terminal mDia1 Armadillo Repeat Region and Dimerisation Domain in complex with the mDia1 autoregulatory domain (DAD)
Descriptor:	Diaphanous protein homolog 1
Authors:	Lammers, M, Rose, R, Scrima, A, Wittinghofer, A.
Deposit date:	2005-10-14
Release date:	2006-03-07
Last modified:	2023-08-23
Method:	X-RAY DIFFRACTION (3.3 Å)
Cite:	*The regulation of mDia1 by autoinhibition and its release by RhoGTP.** Embo J., 24, 2005

2BAQ

p38alpha bound to Ro3201195
Descriptor:	Mitogen-activated protein kinase 14, [5-AMINO-1-(4-FLUOROPHENYL)-1H-PYRAZOL-4-YL](3-{[(2R)-2,3-DIHYDROXYPROPYL]OXY}PHENYL)METHANONE
Authors:	Gerhardt, S, Pauptit, R.A, Breed, J, Read, J, Tucker, J, Norman, R.A.
Deposit date:	2005-10-14
Release date:	2005-12-06
Last modified:	2021-10-20
Method:	X-RAY DIFFRACTION (2.8 Å)
Cite:	Prevention of MKK6-Dependent Activation by Binding to p38alpha MAP Kinase. Biochemistry, 44, 2005

2BAS

Crystal Structure of the Bacillus subtilis YkuI Protein, with an EAL Domain.
Descriptor:	BETA-MERCAPTOETHANOL, YkuI protein
Authors:	Minasov, G, Brunzelle, J.S, Shuvalova, L, Miller, D.J, Collart, F.R, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
Deposit date:	2005-10-14
Release date:	2005-11-29
Last modified:	2024-03-06
Method:	X-RAY DIFFRACTION (2.61 Å)
Cite:	Crystal structures of YkuI and its complex with second messenger cyclic Di-GMP suggest catalytic mechanism of phosphodiester bond cleavage by EAL domains. J.Biol.Chem., 284, 2009

2BAT

THE STRUCTURE OF THE COMPLEX BETWEEN INFLUENZA VIRUS NEURAMINIDASE AND SIALIC ACID, THE VIRAL RECEPTOR
Descriptor:	2-acetamido-2-deoxy-4-O-sulfo-alpha-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:	Varghese, J.N, Colman, P.M.
Deposit date:	1992-08-10
Release date:	1994-01-31
Last modified:	2020-07-29
Method:	X-RAY DIFFRACTION (2 Å)
Cite:	The structure of the complex between influenza virus neuraminidase and sialic acid, the viral receptor. Proteins, 14, 1992

2BAU

Solution NMR structure of the micelle-bound myristoylated N-terminal Arf6
Descriptor:	ADP-ribosylation factor 6, MYRISTIC ACID
Authors:	Gizachew, D.
Deposit date:	2005-10-14
Release date:	2006-07-25
Last modified:	2022-03-09
Method:	SOLUTION NMR
Cite:	NMR structural studies of the myristoylated N-terminus of ADP ribosylation factor 6 (Arf6). Febs Lett., 580, 2006

2BAW

Human Nuclear Receptor-Ligand Complex 1
Descriptor:	Peroxisome proliferator activated receptor delta, VACCENIC ACID, heptyl beta-D-glucopyranoside
Authors:	Fyffe, S.A, Alphey, M.S, Buetow, L, Smith, T.K, Ferguson, M.A.J, Sorensen, M.D, Bjorkling, F, Hunter, W.N.
Deposit date:	2005-10-15
Release date:	2006-01-24
Last modified:	2024-03-13
Method:	X-RAY DIFFRACTION (2.3 Å)
Cite:	Reevaluation of the PPAR-beta/delta Ligand Binding Domain Model Reveals Why It Exhibits the Activated Form Mol.Cell, 21, 2006

2BAX

Atomic Resolution Structure of the Double Mutant (K53,56M) of Bovine Pancreatic Phospholipase A2
Descriptor:	(4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, ...
Authors:	Sekar, K, Yogavel, M, Velmurugan, D, Dauter, Z, Dauter, M, Tsai, M.D.
Deposit date:	2005-10-15
Release date:	2005-10-25
Last modified:	2023-08-23
Method:	X-RAY DIFFRACTION (1.1 Å)
Cite:	Atomic resolution (0.97 A) structure of the triple mutant (K53,56,121M) of bovine pancreatic phospholipase A2. Acta Crystallogr.,Sect.F, 61, 2005

2BAY

Crystal structure of the Prp19 U-box dimer
Descriptor:	Pre-mRNA splicing factor PRP19
Authors:	Vander Kooi, C.W, Ohi, M.D, Rosenberg, J.A, Oldham, M.L, Newcomer, M.E, Gould, K.L, Chazin, W.J.
Deposit date:	2005-10-15
Release date:	2006-01-10
Last modified:	2024-02-14
Method:	X-RAY DIFFRACTION (1.5 Å)
Cite:	The Prp19 U-box Crystal Structure Suggests a Common Dimeric Architecture for a Class of Oligomeric E3 Ubiquitin Ligases. Biochemistry, 45, 2006

2BAZ

Structure of YosS, a putative dUTPase from Bacillus subtilis
Descriptor:	hypothetical protein BSU20020
Authors:	Liang, Y.-H, Wang, J, Su, X.-D.
Deposit date:	2005-10-16
Release date:	2006-10-17
Last modified:	2024-03-13
Method:	X-RAY DIFFRACTION (2.3 Å)
Cite:	Structure of YosS, a putative dUTPase from Bacillus subtilis To be Published

2BB0

Structure of Imidazolonepropionase from Bacillus subtilis
Descriptor:	ACETATE ION, Imidazolonepropionase, ZINC ION
Authors:	Liang, Y.H, Yu, Y, Su, X.D.
Deposit date:	2005-10-16
Release date:	2006-09-26
Last modified:	2024-03-13
Method:	X-RAY DIFFRACTION (2 Å)
Cite:	A catalytic mechanism revealed by the crystal structures of the imidazolonepropionase from Bacillus subtilis J.Biol.Chem., 281, 2006

2BB2

X-RAY ANALYSIS OF BETA B2-CRYSTALLIN AND EVOLUTION OF OLIGOMERIC LENS PROTEINS
Descriptor:	BETA B2-CRYSTALLIN, BETA-MERCAPTOETHANOL
Authors:	Bax, B, Lapatto, R, Nalini, V, Driessen, H, Lindley, P.F, Mahadevan, D, Blundell, T.L, Slingsby, C.
Deposit date:	1992-09-21
Release date:	1993-10-31
Last modified:	2024-06-05
Method:	X-RAY DIFFRACTION (2.1 Å)
Cite:	X-ray analysis of beta B2-crystallin and evolution of oligomeric lens proteins. Nature, 347, 1990

2BB3

Crystal Structure of Cobalamin Biosynthesis Precorrin-6Y Methylase (cbiE) from Archaeoglobus fulgidus
Descriptor:	S-ADENOSYL-L-HOMOCYSTEINE, cobalamin biosynthesis precorrin-6Y methylase (cbiE)
Authors:	Kim, Y, Joachimiak, A, Xu, X, Savchenko, A, Edwards, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:	2005-10-17
Release date:	2005-11-29
Last modified:	2011-07-13
Method:	X-RAY DIFFRACTION (2.27 Å)
Cite:	Crystal Structure of Cobalamin Biosynthesis Precorrin-6Y Methylase (cbiE) from Archaeoglobus fulgidus To be Published

2BB4

Porcine pancreatic elastase complexed with beta-casomorphin-7 and Asp-Phe at pH 5.0
Descriptor:	ASPARTIC ACID, CALCIUM ION, Elastase-1, ...
Authors:	Liu, B, Schofield, C.J, Wilmouth, R.C.
Deposit date:	2005-10-17
Release date:	2006-05-30
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (1.6 Å)
Cite:	Structural analyses on intermediates in serine protease catalysis J.Biol.Chem., 281, 2006

2BB5

Structure of Human Transcobalamin in complex with Cobalamin
Descriptor:	COBALAMIN, Transcobalamin II
Authors:	Wuerges, J, Garau, G, Geremia, S, Fedosov, S.N, Petersen, T.E, Randaccio, L.
Deposit date:	2005-10-17
Release date:	2006-04-04
Last modified:	2023-08-23
Method:	X-RAY DIFFRACTION (3.2 Å)
Cite:	Structural basis for mammalian vitamin B12 transport by transcobalamin. Proc.Natl.Acad.Sci.Usa, 103, 2006

2BB6

Structure of Cobalamin-complexed Bovine Transcobalamin in Monoclinic Crystal Form
Descriptor:	CHLORIDE ION, COBALAMIN, Transcobalamin II
Authors:	Wuerges, J, Garau, G, Geremia, S, Fedosov, S.N, Petersen, T.E, Randaccio, L.
Deposit date:	2005-10-17
Release date:	2006-04-04
Last modified:	2024-04-03
Method:	X-RAY DIFFRACTION (2 Å)
Cite:	Structural basis for mammalian vitamin B12 transport by transcobalamin. Proc.Natl.Acad.Sci.Usa, 103, 2006

2BB7

Mn Form Of E. coli Methionine Aminopeptidase In Complex With a quinolinyl sulfonamide inhibitor
Descriptor:	MANGANESE (II) ION, Methionine aminopeptidase, N-(QUINOLIN-8-YL)METHANESULFONAMIDE, ...
Authors:	Ye, Q.Z.
Deposit date:	2005-10-17
Release date:	2006-01-24
Last modified:	2023-08-23
Method:	X-RAY DIFFRACTION (1.7 Å)
Cite:	Metal mediated inhibition of methionine aminopeptidase by quinolinyl sulfonamides Biochem.Biophys.Res.Commun., 339, 2006

2BB8

N-TERMINAL DNA BINDING DOMAIN FROM TN916 INTEGRASE, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor:	INTEGRASE
Authors:	Clubb, R.T, Connolly, K.M, Wojciak, J.M.
Deposit date:	1998-05-12
Release date:	1998-11-25
Last modified:	2024-05-22
Method:	SOLUTION NMR
Cite:	Site-specific DNA binding using a variation of the double stranded RNA binding motif. Nat.Struct.Biol., 5, 1998

2BB9

Structure of HIV1 protease and AKC4p_133a complex.
Descriptor:	2-ETHOXYETHYL (1S,2S)-3-{(2S)-4-[(3AS,8S,8AR)-2-OXO-3,3A,8,8A-TETRAHYDRO-2H-INDENO[1,2-D][1,3]OXAZOL-8-YL]-2-BENZYL-3-OXO-2,3-DIHYDRO-1H-PYRROL-2-YL}-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, Protease
Authors:	Smith III, A.B, Charnley, A.K, Kuo, L.C, Munshi, S.
Deposit date:	2005-10-17
Release date:	2005-11-15
Last modified:	2023-08-23
Method:	X-RAY DIFFRACTION (1.35 Å)
Cite:	Design, synthesis, and biological evaluation of monopyrrolinone-based HIV-1 protease inhibitors possessing augmented P2' side chains Bioorg.Med.Chem.Lett., 16, 2006

2BBA

Crystal Structure and Thermodynamic Characterization of the EphB4 Receptor in Complex with an ephrin-B2 Antagonist Peptide Reveals the Determinants for Receptor Specificity.
Descriptor:	Agonist peptide, Ephrin type-B receptor 4, SULFATE ION
Authors:	Chrencik, J.E, Kuhn, P, Accelerated Technologies Center for Gene to 3D Structure (ATCG3D)
Deposit date:	2005-10-17
Release date:	2006-07-18
Last modified:	2023-08-23
Method:	X-RAY DIFFRACTION (1.65 Å)
Cite:	Structure and thermodynamic characterization of the EphB4/Ephrin-B2 antagonist peptide complex reveals the determinants for receptor specificity. Structure, 14, 2006

2BBB

Structure of HIV1 protease and hh1_173_3a complex.
Descriptor:	(3S)-TETRAHYDROFURAN-3-YL (1R)-3-{(2R)-4-[(1S,3S)-3-(2-AMINO-2-OXOETHYL)-2,3-DIHYDRO-1H-INDEN-1-YL]-2-BENZYL-3-OXO-2,3-DIHYDRO-1H-PYRROL-2-YL}-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, Protease
Authors:	Smith III, A.B, Charnley, A.K, Kuo, L.C, Munshi, S.
Deposit date:	2005-10-17
Release date:	2005-11-15
Last modified:	2023-08-23
Method:	X-RAY DIFFRACTION (1.7 Å)
Cite:	Design, synthesis, and biological evaluation of monopyrrolinone-based HIV-1 protease inhibitors possessing augmented P2' side chains Bioorg.Med.Chem.Lett., 16, 2006

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Displayed results:	25
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