Crystal Structure of the Bacillus subtilis YkuI Protein, with an EAL Domain.

Summary for 2BAS

DescriptorYkuI protein, BETA-MERCAPTOETHANOL (3 entities in total)
Functional Keywordsykui protein, eal domain, structural genomics, psi, protein structure initiative, midwest center for structural genomics, mcsg, signaling protein
Biological sourceBacillus subtilis
Total number of polymer chains2
Total molecular weight102611.84
Minasov, G.,Brunzelle, J.S.,Shuvalova, L.,Miller, D.J.,Collart, F.R.,Joachimiak, A.,Anderson, W.F.,Midwest Center for Structural Genomics (MCSG) (deposition date: 2005-10-14, release date: 2005-11-29, Last modification date: 2017-10-11)
Primary citation
Minasov, G.,Padavattan, S.,Shuvalova, L.,Brunzelle, J.S.,Miller, D.J.,Basle, A.,Massa, C.,Collart, F.R.,Schirmer, T.,Anderson, W.F.
Crystal structures of YkuI and its complex with second messenger cyclic Di-GMP suggest catalytic mechanism of phosphodiester bond cleavage by EAL domains.
J.Biol.Chem., 284:13174-13184, 2009
PubMed: 19244251 (PDB entries with the same primary citation)
DOI: 10.1074/jbc.M808221200
MImport into Mendeley
Experimental method

Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers 0.2827 0.6% 4.4% 10.4%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
Download full validation reportDownload
PDB entries from 2020-10-28