Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8P0C
DownloadVisualize
BU of 8p0c by Molmil
Rubella virus p150 macro domain (apo)
Descriptor: Non-structural polyprotein p200
Authors:Stoll, G.A, Modis, Y.
Deposit date:2023-05-10
Release date:2024-01-17
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Crystal structure and biochemical activity of the macrodomain from rubella virus p150.
J.Virol., 98, 2024
2Y9P
DownloadVisualize
BU of 2y9p by Molmil
Pex4p-Pex22p mutant II structure
Descriptor: PEROXISOME ASSEMBLY PROTEIN 22, UBIQUITIN-CONJUGATING ENZYME E2-21 KDA
Authors:Williams, C, van den Berg, M, Panjikar, S, Distel, B, Wilmanns, M.
Deposit date:2011-02-16
Release date:2012-02-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Pex4P-Pex22P Structure
To be Published
7S9Q
DownloadVisualize
BU of 7s9q by Molmil
Ternary complex of DNA Polymerase Beta with Template Fapy-dG and an incoming dATP analog
Descriptor: 2'-deoxy-5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]adenosine, DNA (5'-D(*CP*CP*GP*AP*CP*(FAP)P*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3'), ...
Authors:Freudenthal, B.D, Ryan, B.J, Smith, M.R.
Deposit date:2021-09-21
Release date:2022-08-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Dynamics of a Common Mutagenic Oxidative DNA Lesion in Duplex DNA and during DNA Replication.
J.Am.Chem.Soc., 144, 2022
2MIQ
DownloadVisualize
BU of 2miq by Molmil
Solution NMR Structure of PHD Type 1 Zinc Finger Domain 1 of Lysine-specific Demethylase Lid from Drosophila melanogaster, Northeast Structural Genomics Consortium (NESG) Target FR824J
Descriptor: Lysine-specific demethylase lid, ZINC ION
Authors:Xu, X, Eletsky, A, Shastry, R, Maglaqui, M, Janjua, H, Xiao, R, Everett, J.K, Sukumaran, D.K, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG), Chaperone-Enabled Studies of Epigenetic Regulation Enzymes (CEBS)
Deposit date:2013-12-17
Release date:2014-01-29
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution NMR Structure of PHD Type 1 Zinc Finger Domain 1 from Lysine-specific Demethylase Lid from Drosophila melanogaster, Northeast Structural Genomics Consortium (NESG) Target FR824J
To be Published
7ACO
DownloadVisualize
BU of 7aco by Molmil
Crystal structure of E. coli HTH-type transcriptional regulator RcdA in complex with Tris at 1.80 A resolution
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, HTH-type transcriptional regulator RcdA
Authors:Pietrzyk-Brzezinska, A.J, Cociurovscaia, A.
Deposit date:2020-09-11
Release date:2021-08-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.798 Å)
Cite:Structures of the TetR-like transcription regulator RcdA alone and in complexes with ligands.
Proteins, 90, 2022
8OOW
DownloadVisualize
BU of 8oow by Molmil
Glutamine synthetase from Methermicoccus shengliensis at a resolution of 2.64 A
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Glutamine synthetase, ...
Authors:Mueller, M.-C, Lemaire, O.N, Wagner, T.
Deposit date:2023-04-06
Release date:2024-01-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Differences in regulation mechanisms of glutamine synthetases from methanogenic archaea unveiled by structural investigations.
Commun Biol, 7, 2024
8OOI
DownloadVisualize
BU of 8ooi by Molmil
Full composite cryo-EM map of p97/VCP in ADP.Pi state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Cheng, T.C, Sakata, E, Schuetz, A.K.
Deposit date:2023-04-05
Release date:2024-01-31
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (2.61 Å)
Cite:Characterizing ATP processing by the AAA+ protein p97 at the atomic level.
Nat.Chem., 16, 2024
7ACL
DownloadVisualize
BU of 7acl by Molmil
Crystal structure of E. coli HTH-type transcriptional regulator RcdA at 2.05 A resolution
Descriptor: DI(HYDROXYETHYL)ETHER, HTH-type transcriptional regulator RcdA
Authors:Pietrzyk-Brzezinska, A.J, Cociurovscaia, A.
Deposit date:2020-09-11
Release date:2021-08-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.049 Å)
Cite:Structures of the TetR-like transcription regulator RcdA alone and in complexes with ligands.
Proteins, 90, 2022
7PP6
DownloadVisualize
BU of 7pp6 by Molmil
MUC2 Tubules of D1D2D3 domains
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Javitt, G, Fass, D.
Deposit date:2021-09-13
Release date:2022-02-16
Last modified:2022-05-25
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Helical self-assembly of a mucin segment suggests an evolutionary origin for von Willebrand factor tubules.
Proc.Natl.Acad.Sci.USA, 119, 2022
7ACM
DownloadVisualize
BU of 7acm by Molmil
Crystal structure of E. coli HTH-type transcriptional regulator RcdA in complex with TMAO at 1.76 A resolution
Descriptor: HTH-type transcriptional regulator RcdA, trimethylamine oxide
Authors:Pietrzyk-Brzezinska, A.J, Cociurovscaia, A.
Deposit date:2020-09-11
Release date:2021-08-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.763 Å)
Cite:Structures of the TetR-like transcription regulator RcdA alone and in complexes with ligands.
Proteins, 90, 2022
7S9L
DownloadVisualize
BU of 7s9l by Molmil
Crystal Structure of DNA Polymerase Beta with Ring open intermediate Fapy-dG base-paired with a dC
Descriptor: DNA (5'-D(*CP*CP*GP*AP*CP*GP*GP*CP*GP*CP*AP*TP*(FAP)P*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*CP*AP*TP*GP*CP*GP*C)-3'), DNA (5'-D(P*GP*TP*CP*GP*G)-3'), ...
Authors:Freudenthal, B.D, Ryan, B.J.
Deposit date:2021-09-21
Release date:2022-08-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural Dynamics of a Common Mutagenic Oxidative DNA Lesion in Duplex DNA and during DNA Replication.
J.Am.Chem.Soc., 144, 2022
7AAW
DownloadVisualize
BU of 7aaw by Molmil
Thioredoxin Reductase from Bacillus cereus
Descriptor: ACETATE ION, FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Shoor, M, Gudim, I, Hersleth, H.-P, Hammerstad, M.
Deposit date:2020-09-04
Release date:2021-09-15
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Thioredoxin reductase from Bacillus cereus exhibits distinct reduction and NADPH-binding properties.
Febs Open Bio, 11, 2021
7DQD
DownloadVisualize
BU of 7dqd by Molmil
Crystal structure of the AMP-PNP-bound mutant A(S23C)3B(N64C)3 complex from enterococcus hirae V-ATPase
Descriptor: GLYCEROL, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Maruyama, S, Suzuki, K, Mizutani, K, Imai, F.L, Ishizuka-Katsura, Y, Shirouzu, M, Murata, T.
Deposit date:2020-12-23
Release date:2021-12-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.383 Å)
Cite:The combination of high-speed AFM and X-ray crystallography reveals rotary catalysis
To Be Published
8OUE
DownloadVisualize
BU of 8oue by Molmil
The H/ACA RNP lobe of human telomerase with the dyskerin thumb loop in a semi-closed conformation
Descriptor: H/ACA ribonucleoprotein complex subunit 1, H/ACA ribonucleoprotein complex subunit 2, H/ACA ribonucleoprotein complex subunit 3, ...
Authors:Ghanim, G.E, Sekne, Z, van Roon, A.M.M, Balch, S, Nguyen, T.H.D.
Deposit date:2023-04-22
Release date:2024-01-31
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:2.7 angstrom cryo-EM structure of human telomerase H/ACA ribonucleoprotein.
Nat Commun, 15, 2024
5KJ5
DownloadVisualize
BU of 5kj5 by Molmil
Crystal structure of 2-aminomuconate 6-semialdehyde dehydrogenase N169D in complex with NAD+
Descriptor: 2-aminomuconate 6-semialdehyde dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Yang, Y, Davis, I, Ha, U, Wang, Y, Shin, I, Liu, A.
Deposit date:2016-06-17
Release date:2016-11-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.113 Å)
Cite:A Pitcher-and-Catcher Mechanism Drives Endogenous Substrate Isomerization by a Dehydrogenase in Kynurenine Metabolism.
J.Biol.Chem., 291, 2016
8OUF
DownloadVisualize
BU of 8ouf by Molmil
The H/ACA RNP lobe of human telomerase with the dyskerin thumb loop in an open conformation
Descriptor: H/ACA ribonucleoprotein complex subunit 1, H/ACA ribonucleoprotein complex subunit 2, H/ACA ribonucleoprotein complex subunit 3, ...
Authors:Ghanim, G.E, Sekne, Z, van Roon, A.M.M, Balch, S, Nguyen, T.H.D.
Deposit date:2023-04-22
Release date:2024-01-31
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:2.7 angstrom cryo-EM structure of human telomerase H/ACA ribonucleoprotein.
Nat Commun, 15, 2024
8P0E
DownloadVisualize
BU of 8p0e by Molmil
Rubella virus p150 macro domain in complex with ADP-ribose
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, Non-structural polyprotein p200
Authors:Stoll, G.A, Modis, Y.
Deposit date:2023-05-10
Release date:2024-01-17
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Crystal structure and biochemical activity of the macrodomain from rubella virus p150.
J.Virol., 98, 2024
7A9K
DownloadVisualize
BU of 7a9k by Molmil
Co-substituted Keggin silicotungstate with covalent bond to proteinase K
Descriptor: Co-substituted Keggin silicotungstate, Proteinase K, SULFATE ION
Authors:Breibeck, J, Rompel, A.
Deposit date:2020-09-02
Release date:2021-10-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Speciation of Transition-Metal-Substituted Keggin-Type Silicotungstates Affected by the Co-crystallization Conditions with Proteinase K.
Inorg.Chem., 60, 2021
7A90
DownloadVisualize
BU of 7a90 by Molmil
WT STING in complex with 3',3'-c-di[2'FdAM(PS)]
Descriptor: 9-[(1~{R},3~{R},6~{R},8~{R},9~{R},10~{R},12~{R},15~{R},17~{R},18~{R})-17-(6-aminopurin-9-yl)-9,18-bis(fluoranyl)-3,12-bis(oxidanylidene)-3,12-bis(sulfanyl)-2,4,7,11,13,16-hexaoxa-3$l^{5},12$l^{5}-diphosphatricyclo[13.3.0.0^{6,10}]octadecan-8-yl]purin-6-amine, Stimulator of interferon protein
Authors:Boura, E, Smola, M.
Deposit date:2020-09-01
Release date:2021-10-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.185 Å)
Cite:WT STING in complex with 3',3'-c-di[2'FdAM(PS)]
To Be Published
7KBO
DownloadVisualize
BU of 7kbo by Molmil
Reverse Transcriptase Diabody with S82bC, R83T Mutations Crystallized in C2
Descriptor: 1,2-ETHANEDIOL, Single-chain scFv
Authors:Chesterman, C, Arnold, E.
Deposit date:2020-10-02
Release date:2021-03-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Co-crystallization with diabodies: A case study for the introduction of synthetic symmetry.
Structure, 29, 2021
7A9F
DownloadVisualize
BU of 7a9f by Molmil
Co-substituted Keggin silicotungstate with covalent bond to proteinase K
Descriptor: Co-substituted Keggin silicotungstate, Proteinase K, SULFATE ION
Authors:Breibeck, J, Rompel, A.
Deposit date:2020-09-02
Release date:2021-10-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Speciation of Transition-Metal-Substituted Keggin-Type Silicotungstates Affected by the Co-crystallization Conditions with Proteinase K.
Inorg.Chem., 60, 2021
8P89
DownloadVisualize
BU of 8p89 by Molmil
X-ray structure of cardiotoxic light chain H3 in complex to neutralizing nanobody B5
Descriptor: CHLORIDE ION, Light chain H3, Nanobody B5
Authors:Broggini, L, Ricagno, S.
Deposit date:2023-05-31
Release date:2024-01-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.187 Å)
Cite:Nanobodies counteract the toxicity of an amyloidogenic light chain by stabilizing a partially open dimeric conformation.
J.Mol.Biol., 435, 2023
7POV
DownloadVisualize
BU of 7pov by Molmil
MUC2 Tubules of D1D2D3 domains
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Javitt, G, Fass, D.
Deposit date:2021-09-10
Release date:2022-02-16
Last modified:2022-05-25
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Helical self-assembly of a mucin segment suggests an evolutionary origin for von Willebrand factor tubules.
Proc.Natl.Acad.Sci.USA, 119, 2022
2Z3Z
DownloadVisualize
BU of 2z3z by Molmil
Prolyl tripeptidyl aminopeptidase mutant E636A complexd with an inhibitor
Descriptor: Dipeptidyl aminopeptidase IV, SULFATE ION, [(2R)-1-(L-ALANYL-L-ISOLEUCYL)PYRROLIDIN-2-YL]BORONIC ACID
Authors:Xu, Y, Nakajima, Y, Ito, K, Yoshimoto, T.
Deposit date:2007-06-09
Release date:2008-02-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Novel inhibitor for prolyl tripeptidyl aminopeptidase from Porphyromonas gingivalis and details of substrate-recognition mechanism
J.Mol.Biol., 375, 2008
8P88
DownloadVisualize
BU of 8p88 by Molmil
X-ray structure of cardiotoxic light chain H3 in complex to neutralizing nanobody C4
Descriptor: CHLORIDE ION, Light Chain H3, Nanobody C4, ...
Authors:Broggini, L, Ricagno, S.
Deposit date:2023-05-31
Release date:2024-01-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.022 Å)
Cite:Nanobodies counteract the toxicity of an amyloidogenic light chain by stabilizing a partially open dimeric conformation.
J.Mol.Biol., 435, 2023

224004

건을2024-08-21부터공개중

PDB statisticsPDBj update infoContact PDBjnumon