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6R6G
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Structure of XBP1u-paused ribosome nascent chain complex with SRP.
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S12, ...
著者Shanmuganathan, V, Cheng, J, Braunger, K, Berninghausen, O, Beatrix, B, Beckmann, R.
登録日2019-03-27
公開日2019-07-10
最終更新日2019-10-30
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural and mutational analysis of the ribosome-arresting human XBP1u.
Elife, 8, 2019
6R7Q
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BU of 6r7q by Molmil
Structure of XBP1u-paused ribosome nascent chain complex with Sec61.
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S12, ...
著者Shanmuganathan, V, Cheng, J, Braunger, K, Berninghausen, O, Beatrix, B, Beckmann, R.
登録日2019-03-29
公開日2019-07-10
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structural and mutational analysis of the ribosome-arresting human XBP1u.
Elife, 8, 2019
6R5Q
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BU of 6r5q by Molmil
Structure of XBP1u-paused ribosome nascent chain complex (post-state)
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S12, ...
著者Shanmuganathan, V, Cheng, J, Berninghausen, O, Beckmann, R.
登録日2019-03-25
公開日2019-07-10
最終更新日2019-10-30
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural and mutational analysis of the ribosome-arresting human XBP1u.
Elife, 8, 2019
6R6P
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BU of 6r6p by Molmil
Structure of XBP1u-paused ribosome nascent chain complex (rotated state)
分子名称: 18S rRNA, 28S ribosomal RNA, 40S ribosomal protein S12, ...
著者Shanmuganathan, V, Cheng, J, Berninghausen, O, Beckmann, R.
登録日2019-03-27
公開日2019-07-10
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural and mutational analysis of the ribosome-arresting human XBP1u.
Elife, 8, 2019
7QVP
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BU of 7qvp by Molmil
Human collided disome (di-ribosome) stalled on XBP1 mRNA
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ...
著者Denk, T.G, Tesina, P, Beckmann, R.
登録日2022-01-22
公開日2022-10-12
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献A distinct mammalian disome collision interface harbors K63-linked polyubiquitination of uS10 to trigger hRQT-mediated subunit dissociation.
Nat Commun, 13, 2022
6L03
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BU of 6l03 by Molmil
structure of PTP-MEG2 and MUNC18-1-pY145 peptide complex
分子名称: Tyrosine-protein phosphatase non-receptor type 9, stxbp1-pY145 peptide
著者Xu, Y.F, Chen, X, Yu, X, Sun, J.P.
登録日2019-09-25
公開日2020-09-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.084 Å)
主引用文献PTP-MEG2 regulates quantal size and fusion pore opening through two distinct structural bases and substrates.
Embo Rep., 22, 2021
3P23
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BU of 3p23 by Molmil
Crystal structure of the Human kinase and RNase domains in complex with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, SULFATE ION, ...
著者Ali, M.M.U, Pearl, L.H.
登録日2010-10-01
公開日2011-02-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure of the Ire1 autophosphorylation complex and implications for the unfolded protein response.
Embo J., 30, 2011
4G68
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BU of 4g68 by Molmil
Biochemical and structural insights into xylan utilization by the thermophilic bacteriumcaldanaerobius polysaccharolyticus
分子名称: ABC transporter, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-alpha-D-xylopyranose
著者Agarwal, V, Nair, S.K.
登録日2012-07-18
公開日2012-08-22
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Biochemical and Structural Insights into Xylan Utilization by the Thermophilic Bacterium Caldanaerobius polysaccharolyticus.
J.Biol.Chem., 287, 2012
7BMK
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ATP-Competitive Partial Antagonists-'PAIR's-Rheostatically Modulate IRE1alpha's Kinase Helix-alphaC to Segregate its RNase-Mediated Biological Outputs
分子名称: 1,2-ETHANEDIOL, 2,2,2-tris(fluoranyl)-~{N}-[4-[3-[2-[[(3~{S})-piperidin-3-yl]amino]pyrimidin-4-yl]pyridin-2-yl]oxynaphthalen-1-yl]ethanesulfonamide, DI(HYDROXYETHYL)ETHER, ...
著者Feldman, H.C, Ghosh, R, Auyeung, V, Mueller, J.L, Vidadala, V.N, Olivier, A, Backes, B.J, Zikherman, J, Papa, F.R, Maly, D.J.
登録日2021-01-20
公開日2021-09-29
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献ATP-competitive partial antagonists of the IRE1 alpha RNase segregate outputs of the UPR.
Nat.Chem.Biol., 17, 2021
4Z7H
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BU of 4z7h by Molmil
Crystal structure of human IRE1 cytoplasmic kinase-RNase region - complex with imidazopyridine compound 3
分子名称: 2-methoxy-4-[6-(propan-2-ylamino)imidazo[1,2-b]pyridazin-3-yl]benzamide, SULFATE ION, Serine/threonine-protein kinase/endoribonuclease IRE1
著者Joshi, A, Bayliss, R.
登録日2015-04-07
公開日2015-05-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Molecular mechanisms of human IRE1 activation through dimerization and ligand binding.
Oncotarget, 6, 2015
4Z7G
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BU of 4z7g by Molmil
Crystal structure of human IRE1 cytoplasmic kinase-RNase region - apo
分子名称: SODIUM ION, Serine/threonine-protein kinase/endoribonuclease IRE1
著者Bayliss, R, Joshi, A.
登録日2015-04-07
公開日2015-05-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Molecular mechanisms of human IRE1 activation through dimerization and ligand binding.
Oncotarget, 6, 2015
5VJY
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BU of 5vjy by Molmil
Crystal Structure of dUTP pyrophosphatase protein, from Naegleria fowleri
分子名称: 1,2-ETHANEDIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, dUTP pyrophosphatase
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2017-04-20
公開日2017-05-03
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of dUTP pyrophosphatase protein, from Naegleria fowleri
to be published
6ZK7
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BU of 6zk7 by Molmil
Crystal Structure of human PYROXD1/FAD complex
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1
著者Meinhart, A, Asanovic, I, Martinez, J, Clausen, T.
登録日2020-06-30
公開日2021-05-12
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献The oxidoreductase PYROXD1 uses NAD(P) + as an antioxidant to sustain tRNA ligase activity in pre-tRNA splicing and unfolded protein response.
Mol.Cell, 81, 2021
6MJK
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BU of 6mjk by Molmil
Crystal Structure of dUTP pyrophosphatase protein, from Naegleria fowleri in complex with deoxyuridine
分子名称: 2'-DEOXYURIDINE, MAGNESIUM ION, PYROPHOSPHATE, ...
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2018-09-21
公開日2018-10-31
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Crystal Structure of dUTP pyrophosphatase protein, from Naegleria fowleri in complex with deoxyuridine
to be published
6URC
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BU of 6urc by Molmil
Crystal structure of IRE1a in complex with compound 18
分子名称: 2-chloro-N-(6-methyl-5-{[3-(2-{[(3S)-piperidin-3-yl]amino}pyrimidin-4-yl)pyridin-2-yl]oxy}naphthalen-1-yl)benzene-1-sulfonamide, GLYCEROL, Serine/threonine-protein kinase/endoribonuclease IRE1
著者Wallweber, H.H, Wang, W.
登録日2019-10-23
公開日2019-11-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Disruption of IRE1 alpha through its kinase domain attenuates multiple myeloma.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
3FBV
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BU of 3fbv by Molmil
Crystal structure of the oligomer formed by the kinase-ribonuclease domain of Ire1
分子名称: N~2~-1H-benzimidazol-5-yl-N~4~-(3-cyclopropyl-1H-pyrazol-5-yl)pyrimidine-2,4-diamine, Serine/threonine-protein kinase/endoribonuclease IRE1
著者Korennykh, A.V, Egea, P.F, Korostelev, A.A, Finer-Moore, J, Zhang, C, Shokat, K.M, Stroud, R.M, Walter, P.
登録日2008-11-19
公開日2008-12-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献The unfolded protein response signals through high-order assembly of Ire1.
Nature, 457, 2009
3SDJ
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BU of 3sdj by Molmil
Structure of RNase-inactive point mutant of oligomeric kinase/RNase Ire1
分子名称: N~2~-1H-benzimidazol-5-yl-N~4~-(3-cyclopropyl-1H-pyrazol-5-yl)pyrimidine-2,4-diamine, Serine/threonine-protein kinase/endoribonuclease IRE1
著者Korennykh, A, Korostelev, A, Egea, P, Finer-Moore, J, Zhang, C, Stroud, R, Shokat, K, Walter, P.
登録日2011-06-09
公開日2011-07-13
実験手法X-RAY DIFFRACTION (3.65 Å)
主引用文献Structural and functional basis for RNA cleavage by Ire1.
Bmc Biol., 9, 2011
3SDM
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BU of 3sdm by Molmil
Structure of oligomeric kinase/RNase Ire1 in complex with an oligonucleotide
分子名称: Serine/threonine-protein kinase/endoribonuclease IRE1
著者Korennykh, A, Korostelev, A, Egea, P, Finer-Moore, J, Zhang, C, Stroud, R, Shokat, K, Walter, P.
登録日2011-06-09
公開日2011-07-13
実験手法X-RAY DIFFRACTION (6.6 Å)
主引用文献Cofactor-mediated conformational control in the bifunctional kinase/RNase Ire1.
Bmc Biol., 9, 2011
3LJ1
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BU of 3lj1 by Molmil
IRE1 complexed with Cdk1/2 Inhibitor III
分子名称: 5-AMINO-3-{[4-(AMINOSULFONYL)PHENYL]AMINO}-N-(2,6-DIFLUOROPHENYL)-1H-1,2,4-TRIAZOLE-1-CARBOTHIOAMIDE, Serine/threonine-protein kinase/endoribonuclease IRE1
著者Lee, K.P.K, Sicheri, F.
登録日2010-01-25
公開日2010-05-12
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.33 Å)
主引用文献Flavonol activation defines an unanticipated ligand-binding site in the kinase-RNase domain of IRE1.
Mol.Cell, 38, 2010
3LJ2
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BU of 3lj2 by Molmil
IRE1 complexed with JAK Inhibitor I
分子名称: 2-TERT-BUTYL-9-FLUORO-3,6-DIHYDRO-7H-BENZ[H]-IMIDAZ[4,5-F]ISOQUINOLINE-7-ONE, Serine/threonine-protein kinase/endoribonuclease IRE1
著者Lee, K.P.K, Sicheri, F.
登録日2010-01-25
公開日2010-05-12
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.33 Å)
主引用文献Flavonol activation defines an unanticipated ligand-binding site in the kinase-RNase domain of IRE1.
Mol.Cell, 38, 2010
3LJ0
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IRE1 complexed with ADP and Quercetin
分子名称: 3,5,7,3',4'-PENTAHYDROXYFLAVONE, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Lee, K.P.K, Sicheri, F.
登録日2010-01-25
公開日2010-05-12
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Flavonol activation defines an unanticipated ligand-binding site in the kinase-RNase domain of IRE1.
Mol.Cell, 38, 2010
8UVL
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BU of 8uvl by Molmil
Crystal structure of selective IRE1a inhibitor 29 at the enzyme active site
分子名称: 1,2-ETHANEDIOL, 1-phenyl-N-(2,3,6-trifluoro-4-{[(3M)-3-(2-{[(3R,5R)-5-fluoropiperidin-3-yl]amino}pyrimidin-4-yl)pyridin-2-yl]oxy}phenyl)methanesulfonamide, Serine/threonine-protein kinase/endoribonuclease IRE1
著者Kiefer, J.R, Wallweber, H.A, Braun, M.-G, Wei, W, Jiang, F, Wang, W, Rudolph, J, Ashkenazi, A.
登録日2023-11-03
公開日2024-05-29
最終更新日2024-06-26
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Discovery of Potent, Selective, and Orally Available IRE1 alpha Inhibitors Demonstrating Comparable PD Modulation to IRE1 Knockdown in a Multiple Myeloma Model.
J.Med.Chem., 67, 2024
1GO4
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Crystal structure of Mad1-Mad2 reveals a conserved Mad2 binding motif in Mad1 and Cdc20.
分子名称: Mitotic spindle assembly checkpoint protein MAD1, Mitotic spindle assembly checkpoint protein MAD2A
著者Sironi, L, Mapelli, M, Jeang, K.T, Musacchio, A.
登録日2001-10-17
公開日2002-05-16
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystal structure of the tetrameric Mad1-Mad2 core complex: implications of a 'safety belt' binding mechanism for the spindle checkpoint.
EMBO J., 21, 2002
4DZO
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BU of 4dzo by Molmil
Structure of Human Mad1 C-terminal Domain Reveals Its Involvement in Kinetochore Targeting
分子名称: Mitotic spindle assembly checkpoint protein MAD1
著者Luo, X, Sun, H, Tomchick, D.R.
登録日2012-03-01
公開日2012-04-11
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Structure of human Mad1 C-terminal domain reveals its involvement in kinetochore targeting.
Proc.Natl.Acad.Sci.USA, 109, 2012
5AAS
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BU of 5aas by Molmil
The selective autophagy receptor TAX1BP1 is required for autophagy- dependent capture of cytosolic Salmonella typhimurium
分子名称: TAX1-BINDING PROTEIN 1, ZINC ION
著者Tumbarello, D.A, Manna, P.T, Allen, M, Bycroft, M, Kendrick-Jones, J, Buss, F.
登録日2015-07-28
公開日2015-09-23
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The Autophagy Receptor Tax1BP1 and the Molecular Motor Myosin Vi are Required for Clearance of Salmonella Typhimurium by Autophagy.
Plos Pathog., 11, 2015

 

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