PDB: 82 件ウェブページステータス検索Chemie searchBIRD

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7C45	The crystal structure of Trypanosoma brucei RNase D complex with RNA U12 分子名称: CALCIUM ION, CCHC-type domain-containing protein, RNA (5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3'), ... 著者 Gao, Y.Q, Gan, J.H. 登録日 2020-05-15 公開日 2021-04-07 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.769 Å) 主引用文献 Structural basis for guide RNA trimming by RNase D ribonuclease in Trypanosoma brucei. Nucleic Acids Res., 49, 2021
7C42	The crystal structure of Trypanosoma brucei RNase D 分子名称: CCHC-type domain-containing protein, ZINC ION 著者 Gao, Y.Q, Gan, J.H. 登録日 2020-05-14 公開日 2021-04-07 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural basis for guide RNA trimming by RNase D ribonuclease in Trypanosoma brucei. Nucleic Acids Res., 49, 2021
5UDZ	Human LIN28A in complex with let-7f-1 microRNA pre-element 分子名称: Protein lin-28 homolog A, ZINC ION, let-7f-1 pre-element 著者 Nam, Y, Wang, L, Sliz, P. 登録日 2016-12-29 公開日 2017-03-22 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 LIN28 Zinc Knuckle Domain Is Required and Sufficient to Induce let-7 Oligouridylation. Cell Rep, 18, 2017
3TS2	Mouse Lin28A in complex with let-7g microRNA pre-element 分子名称: Protein lin-28 homolog A, RNA (5'-R(*GP*GP*GP*GP*UP*CP*UP*AP*UP*GP*AP*UP*AP*CP*CP*AP*CP*CP*CP*CP*GP*GP*AP*G)-3'), ZINC ION 著者 Nam, Y, Sliz, P. 登録日 2011-09-11 公開日 2011-11-16 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.01 Å) 主引用文献 Molecular Basis for Interaction of let-7 MicroRNAs with Lin28. Cell(Cambridge,Mass.), 147, 2011
7C4B	The crystal structure of Trypanosoma brucei RNase D : UMP complex 分子名称: CCHC-type domain-containing protein, MANGANESE (II) ION, URIDINE-5'-MONOPHOSPHATE, ... 著者 Gao, Y.Q, Gan, J.H. 登録日 2020-05-15 公開日 2021-04-07 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.101 Å) 主引用文献 Structural basis for guide RNA trimming by RNase D ribonuclease in Trypanosoma brucei. Nucleic Acids Res., 49, 2021
7C47	The crystal structure of Trypanosoma brucei RNase D : CMP complex 分子名称: CCHC-type domain-containing protein, CYTIDINE-5'-MONOPHOSPHATE, MANGANESE (II) ION, ... 著者 Gao, Y.Q, Gan, J.H. 登録日 2020-05-15 公開日 2021-04-07 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural basis for guide RNA trimming by RNase D ribonuclease in Trypanosoma brucei. Nucleic Acids Res., 49, 2021
7C4C	The crystal structure of Trypanosoma brucei RNase D : GMP complex 分子名称: CCHC-type domain-containing protein, GUANOSINE-5'-MONOPHOSPHATE, MANGANESE (II) ION, ... 著者 Gao, Y.Q, Gan, J.H. 登録日 2020-05-15 公開日 2021-04-07 実験手法 X-RAY DIFFRACTION (2.265 Å) 主引用文献 Structural basis for guide RNA trimming by RNase D ribonuclease in Trypanosoma brucei. Nucleic Acids Res., 49, 2021
5W0M	Structure of human TUT7 catalytic module (CM) in complex with U5 RNA 分子名称: IODIDE ION, SULFATE ION, Terminal uridylyltransferase 7, ... 著者 Faehnle, C.R, Walleshauser, J, Joshua-Tor, L. 登録日 2017-05-31 公開日 2017-06-28 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.298 Å) 主引用文献 Multi-domain utilization by TUT4 and TUT7 in control of let-7 biogenesis. Nat. Struct. Mol. Biol., 24, 2017
7C43	The crystal structure of Trypanosoma brucei RNase D : AMP complex 分子名称: ADENOSINE MONOPHOSPHATE, CCHC-type domain-containing protein, MANGANESE (II) ION, ... 著者 Gao, Y.Q, Gan, J.H. 登録日 2020-05-14 公開日 2021-04-07 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural basis for guide RNA trimming by RNase D ribonuclease in Trypanosoma brucei. Nucleic Acids Res., 49, 2021
5W0O	Structure of human TUT7 catalytic module (CM) in complex with dsRNA 分子名称: Terminal uridylyltransferase 7, URIDINE 5'-TRIPHOSPHATE, double-stranded RNA 著者 Faehnle, C.R, Walleshauser, J, Joshua-Tor, L. 登録日 2017-05-31 公開日 2017-06-28 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.488 Å) 主引用文献 Multi-domain utilization by TUT4 and TUT7 in control of let-7 biogenesis. Nat. Struct. Mol. Biol., 24, 2017
5W0N	Structure of human TUT7 catalytic module (CM) in complex with UMPNPP and U2 RNA 分子名称: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine, IODIDE ION, MAGNESIUM ION, ... 著者 Faehnle, C.R, Walleshauser, J, Joshua-Tor, L. 登録日 2017-05-31 公開日 2017-06-28 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.497 Å) 主引用文献 Multi-domain utilization by TUT4 and TUT7 in control of let-7 biogenesis. Nat. Struct. Mol. Biol., 24, 2017
8E3I	CRYO-EM STRUCTURE OF the human MPSF IN COMPLEX WITH THE AUUAAA poly(A) signal 分子名称: Cleavage and polyadenylation specificity factor subunit 1, Cleavage and polyadenylation specificity factor subunit 4, RNA (5'-R(P*CP*AP*UP*UP*AP*AP*AP*CP*AP*AP*C)-3'), ... 著者 Gutierrez, P.A, Wei, J, Sun, Y, Tong, L. 登録日 2022-08-17 公開日 2023-01-18 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (2.53 Å) 主引用文献 Molecular basis for the recognition of the AUUAAA polyadenylation signal by mPSF. Rna, 28, 2022
5W0B	Structure of human TUT7 catalytic module (CM) 分子名称: IODIDE ION, SULFATE ION, Terminal uridylyltransferase 7, ... 著者 Faehnle, C.R, Walleshauser, J, Joshua-Tor, L. 登録日 2017-05-30 公開日 2017-06-28 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.614 Å) 主引用文献 Multi-domain utilization by TUT4 and TUT7 in control of let-7 biogenesis. Nat. Struct. Mol. Biol., 24, 2017
8E3Q	CRYO-EM STRUCTURE OF the human MPSF 分子名称: Cleavage and polyadenylation specificity factor subunit 1, Cleavage and polyadenylation specificity factor subunit 4, ZINC ION, ... 著者 Gutierrez, P.A, Wei, J, Sun, Y, Tong, L. 登録日 2022-08-17 公開日 2023-01-18 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (2.68 Å) 主引用文献 Molecular basis for the recognition of the AUUAAA polyadenylation signal by mPSF. Rna, 28, 2022
3NYB	Structure and function of the polymerase core of TRAMP, a RNA surveillance complex 分子名称: Poly(A) RNA polymerase protein 2, Protein AIR2, ZINC ION 著者 Reinisch, K.M, Hamill, S. 登録日 2010-07-14 公開日 2010-08-04 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.7007 Å) 主引用文献 Structure and function of the polymerase core of TRAMP, a RNA surveillance complex. Proc.Natl.Acad.Sci.USA, 107, 2010
5O2U	Llama VHH in complex with p24 分子名称: Capsid protein p24, VHH 59H10 著者 Caillat, C, Verrips, T, Weissenhorn, W. 登録日 2017-05-22 公開日 2017-06-21 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.76 Å) 主引用文献 Unravelling the Molecular Basis of High Affinity Nanobodies against HIV p24: In Vitro Functional, Structural, and in Silico Insights. ACS Infect Dis, 3, 2017
3TS0	Mouse Lin28A in complex with let-7f-1 microRNA pre-element 分子名称: Protein lin-28 homolog A, RNA (5'-R(*GP*GP*GP*GP*UP*AP*GP*UP*GP*AP*UP*UP*UP*UP*AP*CP*CP*CP*UP*GP*GP*AP*G)-3'), ZINC ION 著者 Nam, Y, Sliz, P. 登録日 2011-09-11 公開日 2011-11-16 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.763 Å) 主引用文献 Molecular Basis for Interaction of let-7 MicroRNAs with Lin28. Cell(Cambridge,Mass.), 147, 2011
8R8R	Cryo-EM structure of the human mPSF with PAPOA C-terminus peptide (PAPOAc) 分子名称: Cleavage and polyadenylation specificity factor subunit 1, Cleavage and polyadenylation specificity factor subunit 4, RNA (5'-R(P*AP*AP*UP*AP*AP*A)-3'), ... 著者 Todesca, S, Sandmeir, F, Keidel, A, Conti, E. 登録日 2023-11-29 公開日 2024-04-10 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (2.79 Å) 主引用文献 Molecular basis of human poly(A) polymerase recruitment by mPSF. Rna, 30, 2024
3TRZ	Mouse Lin28A in complex with let-7d microRNA pre-element 分子名称: Protein lin-28 homolog A, RNA (5'-R(*GP*GP*GP*CP*AP*GP*GP*GP*AP*UP*UP*UP*UP*GP*CP*CP*CP*GP*GP*AP*G)-3'), ZINC ION 著者 Nam, Y, Sliz, P. 登録日 2011-09-11 公開日 2011-11-16 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Molecular Basis for Interaction of let-7 MicroRNAs with Lin28. Cell(Cambridge,Mass.), 147, 2011
6URG	Cryo-EM structure of human CPSF160-WDR33-CPSF30-CPSF100 PIM complex 分子名称: Cleavage and polyadenylation specificity factor subunit 1, Cleavage and polyadenylation specificity factor subunit 2, Cleavage and polyadenylation specificity factor subunit 4, ... 著者 Sun, Y, Zhang, Y, Walz, T, Tong, L. 登録日 2019-10-23 公開日 2019-11-27 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structural Insights into the Human Pre-mRNA 3'-End Processing Machinery. Mol.Cell, 77, 2020
7VPX	The cryo-EM structure of the human pre-A complex 分子名称: 5SS, DnaJ homolog subfamily C member 8, PHD finger-like domain-containing protein 5A, ... 著者 Zhang, X, Zhan, X, Shi, Y. 登録日 2021-10-18 公開日 2023-05-03 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structural insights into branch site proofreading by human spliceosome. Nat.Struct.Mol.Biol., 2024
7W5Z	Cryo-EM structure of Tetrahymena thermophila mitochondrial complex IV, composite dimer model 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-oxoglutarate/malate carrier protein, CARDIOLIPIN, ... 著者 Zhou, L, Maldonado, M, Padavannil, A, Letts, J. 登録日 2021-11-30 公開日 2022-04-06 最終更新日 2022-06-01 実験手法 ELECTRON MICROSCOPY (3.02 Å) 主引用文献 Structures of Tetrahymena 's respiratory chain reveal the diversity of eukaryotic core metabolism. Science, 376, 2022
8C9M	HERV-K Gag immature lattice 分子名称: Gag protein 著者 Krebs, A.-S, Liu, H.-F, Zhou, Y, Rey, J.S, Levintov, L, Perilla, J.R, Bartesaghi, A, Zhang, P. 登録日 2023-01-23 公開日 2023-02-01 最終更新日 2024-07-24 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Molecular architecture and conservation of an immature human endogenous retrovirus. Biorxiv, 2023
6DNH	Cryo-EM structure of human CPSF-160-WDR33-CPSF-30-PAS RNA complex at 3.4 A resolution 分子名称: Cleavage and polyadenylation specificity factor subunit 1, Cleavage and polyadenylation specificity factor subunit 4, RNA (5'-R(P*AP*AP*UP*AP*AP*AP*C)-3'), ... 著者 Sun, Y, Zhang, Y, Hamilton, K, Walz, T, Tong, L. 登録日 2018-06-06 公開日 2018-06-27 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Molecular basis for the recognition of the human AAUAAA polyadenylation signal. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
7Z52	Human NEXT dimer - focused reconstruction of the single MTR4 分子名称: Exosome RNA helicase MTR4, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, RNA (5'-R(P*UP*UP*UP*UP*U)-3'), ... 著者 Gerlach, P, Lingaraju, M, Salerno-Kochan, A, Bonneau, F, Basquin, J, Conti, E. 登録日 2022-03-07 公開日 2022-06-22 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structure and regulation of the nuclear exosome targeting complex guides RNA substrates to the exosome. Mol.Cell, 82, 2022

 

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