Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6YNX
DownloadVisualize
BU of 6ynx by Molmil
Cryo-EM structure of Tetrahymena thermophila mitochondrial ATP synthase - Fo-subcomplex
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, ADENOSINE-5'-TRIPHOSPHATE, ...
著者Kock Flygaard, R, Muhleip, A, Amunts, A.
登録日2020-04-14
公開日2020-09-30
最終更新日2025-10-01
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Type III ATP synthase is a symmetry-deviated dimer that induces membrane curvature through tetramerization.
Nat Commun, 11, 2020
6TMO
DownloadVisualize
BU of 6tmo by Molmil
Structure determination of an enhanced affinity TCR, a24b17, in complex with HLA-A*02:01 presenting a MART-1 peptide, EAAGIGILTV
分子名称: 1,2-ETHANEDIOL, Alpha chain of engineered high affinity T-cell receptor, Beta chain of high affinity engineered T-cell receptor, ...
著者Rizkallah, P.J, Cole, D.K.
登録日2019-12-05
公開日2020-10-07
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Molecular Rules Underpinning Enhanced Affinity Binding of Human T Cell Receptors Engineered for Immunotherapy.
Mol Ther Oncolytics, 18, 2020
8G3E
DownloadVisualize
BU of 8g3e by Molmil
Crystal structure of human WDR5 in complex with (1M)-N-[(3,5-difluoro[1,1'-biphenyl]-4-yl)methyl]-6-methyl-4-oxo-1-(pyridin-3-yl)-1,4-dihydropyridazine-3-carboxamide (compound 2, WDR5-MYC inhibitor)
分子名称: (1M)-N-[(3,5-difluoro[1,1'-biphenyl]-4-yl)methyl]-6-methyl-4-oxo-1-(pyridin-3-yl)-1,4-dihydropyridazine-3-carboxamide, WD repeat-containing protein 5
著者Zhao, M.
登録日2023-02-07
公開日2023-06-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献Discovery and Structure-Based Design of Inhibitors of the WD Repeat-Containing Protein 5 (WDR5)-MYC Interaction.
J.Med.Chem., 66, 2023
8RBY
DownloadVisualize
BU of 8rby by Molmil
The crystal structure of the SARS-CoV-2 receptor binding domain in complex with the neutralizing nanobody 1.26
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, Camel-derived nanobody 1.26, ...
著者Casasnovas, J.M, Fernandez, L.A, Silva, K.
登録日2023-12-05
公開日2024-12-11
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The crystal structure of the SARS-CoV-2 receptor binding domain in complex with the neutralizing nanobody 1.26
To Be Published
9DQF
DownloadVisualize
BU of 9dqf by Molmil
Crystal structure of bifunctional GlmU from Staphylococcus aureus NCTC 8325 complexed with acetyl CoA and citrate
分子名称: ACETYL COENZYME *A, Bifunctional protein GlmU, CITRIC ACID
著者Pederick, J.L, Bruning, J.B.
登録日2024-09-24
公開日2025-05-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Functional and structural characterization of Staphylococcus aureus N-acetylglucosamine 1-phosphate uridyltransferase (GlmU) reveals a redox-sensitive acetyltransferase activity.
Protein Sci., 34, 2025
5GY8
DownloadVisualize
BU of 5gy8 by Molmil
Crystal structure of ENZbleach xylanase T28C+T60C mutant
分子名称: Endo-1,4-beta-xylanase
著者Chitnumsub, P, Jaruwat, A, Boonyapakorn, K.
登録日2016-09-22
公開日2017-08-30
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure-based protein engineering for thermostable and alkaliphilic enhancement of endo-beta-1,4-xylanase for applications in pulp bleaching
J. Biotechnol., 259, 2017
5GYC
DownloadVisualize
BU of 5gyc by Molmil
Crystal structure of ENZbleach xylanase K73R+K185R and T28C+T60C mutant
分子名称: Endo-1,4-beta-xylanase
著者Chitnumsub, P, Jaruwat, A, Boonyapakorn, K.
登録日2016-09-22
公開日2017-08-30
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structure-based protein engineering for thermostable and alkaliphilic enhancement of endo-beta-1,4-xylanase for applications in pulp bleaching
J. Biotechnol., 259, 2017
7RBQ
DownloadVisualize
BU of 7rbq by Molmil
Co-crystal structure of human PRMT9 in complex with MT556 inhibitor
分子名称: 1,2-ETHANEDIOL, 7-[5-S-(4-{[(4-ethylpyridin-3-yl)methyl]amino}butyl)-5-thio-beta-D-ribofuranosyl]-7H-pyrrolo[2,3-d]pyrimidin-4-amine, Protein arginine N-methyltransferase 9, ...
著者Zeng, H, Dong, A, Hutchinson, A, Seitova, A, Li, Y, Gao, Y.D, Schneider, S, Siliphaivanh, P, Sloman, D, Nicholson, B, Fischer, C, Hicks, J, Brown, P.J, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
登録日2021-07-06
公開日2021-08-11
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Co-crystal structure of human PRMT9 in complex with MT556 inhibitor
To Be Published
8RJ0
DownloadVisualize
BU of 8rj0 by Molmil
Crystal structure of mutant aspartase from Bacillus sp. YM55-1 in the closed loop conformation
分子名称: Aspartate ammonia-lyase, SODIUM ION, TRIETHYLENE GLYCOL
著者Capra, N, Thunnissen, A.M.W.H, Janssen, D.B.
登録日2023-12-19
公開日2025-01-15
最終更新日2025-02-05
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Bioinformatics and Computationally Supported Redesign of Aspartase for beta-Alanine Synthesis by Acrylic Acid Hydroamination.
Acs Catalysis, 15, 2025
4RH2
DownloadVisualize
BU of 4rh2 by Molmil
Crystal structure of human carbonic anhydrase II in complex with 2-(6-hydroxy-3-Oxo-3H-xanthen-9-yl)-5-{3-1-(4-sulfamoyl-phenyl)-1h-[1,2,3]triazol-4-ylmethyl-thioureido}-benzoic acid
分子名称: 2-(6-hydroxy-3-oxo-3H-xanthen-9-yl)-5-[({[1-(4-sulfamoylphenyl)-1H-1,2,3-triazol-4-yl]methyl}carbamothioyl)amino]benzoic acid, Carbonic anhydrase 2, GLYCEROL, ...
著者Ferraroni, M.
登録日2014-10-01
公開日2015-11-11
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献New classes of carbonic anhydrase inhibitors
to be published
8RLP
DownloadVisualize
BU of 8rlp by Molmil
Human Carbonic Anhydrase II in complex with veralipride
分子名称: 1,2-ETHANEDIOL, Carbonic anhydrase 2, Veralipride, ...
著者Angeli, A, Ferraroni, M.
登録日2024-01-03
公開日2025-01-15
最終更新日2025-07-30
実験手法X-RAY DIFFRACTION (1.342 Å)
主引用文献The dopamine D 2 receptors antagonist Veralipride inhibits carbonic anhydrases: solution and crystallographic insights on human isoforms.
Chem Asian J, 19, 2024
5GQI
DownloadVisualize
BU of 5gqi by Molmil
Crystal structure of Cypovirus Polyhedra mutant with deletion of Ala194
分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, ...
著者Abe, S, Tabe, H, Ijiri, H, Yamashita, K, Hirata, K, Mori, H, Ueno, T.
登録日2016-08-07
公開日2017-02-15
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal Engineering of Self-Assembled Porous Protein Materials in Living Cells
ACS Nano, 11, 2017
8D6D
DownloadVisualize
BU of 8d6d by Molmil
Crystal Structure of Human Myt1 Kinase domain Bounded with compound 39
分子名称: (1P)-2-amino-5-bromo-1-(3-hydroxy-2,6-dimethylphenyl)-1H-pyrrolo[2,3-b]quinoxaline-3-carboxamide, 1,2-ETHANEDIOL, Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase, ...
著者Pau, V.P.T, Mao, D.Y.L, Mader, P, Orlicky, S, Sicheri, F.
登録日2022-06-06
公開日2022-07-27
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Discovery of an Orally Bioavailable and Selective PKMYT1 Inhibitor, RP-6306.
J.Med.Chem., 65, 2022
9GJQ
DownloadVisualize
BU of 9gjq by Molmil
Crystal structure of humanised cereblon from Magnetospirillum gryphiswaldense bound by dihydrouracil-indole compound [1-(1H-indol-6-yl)dihydro-2,4(1H,3H)-pyrimidinedione].
分子名称: 1-(1H-indol-6-yl)-1,3-diazinane-2,4-dione, Cereblon isoform 4, ZINC ION
著者Collie, G.W.
登録日2024-08-22
公開日2025-09-03
実験手法X-RAY DIFFRACTION (1.393 Å)
主引用文献Discovery of dihydrouracil cereblon binders
To Be Published
5GYA
DownloadVisualize
BU of 5gya by Molmil
Crystal structure of ENZbleach xylanase V5N+V6N+K7R+K223R+K227R mutant
分子名称: Endo-1,4-beta-xylanase
著者Chitnumsub, P, Jaruwat, A, Boonyapakorn, K.
登録日2016-09-22
公開日2017-08-30
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Structure-based protein engineering for thermostable and alkaliphilic enhancement of endo-beta-1,4-xylanase for applications in pulp bleaching
J. Biotechnol., 259, 2017
5N1J
DownloadVisualize
BU of 5n1j by Molmil
Crystal structure of the polysaccharide deacetylase Bc1974 from Bacillus cereus
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Peptidoglycan N-acetylglucosamine deacetylase, ...
著者Giastas, P, Andreou, A, Balomenou, S, Bouriotis, V, Eliopoulos, E.E.
登録日2017-02-06
公開日2018-02-21
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structures of the Peptidoglycan N-Acetylglucosamine Deacetylase Bc1974 and Its Complexes with Zinc Metalloenzyme Inhibitors.
Biochemistry, 57, 2018
8FK4
DownloadVisualize
BU of 8fk4 by Molmil
Structure of the catalytic domain of Streptococcus mutans GtfB complexed to acarbose in orthorhombic space group P21212
分子名称: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, CALCIUM ION, Glucosyltransferase-I, ...
著者Schormann, N, Deivanayagam, C.
登録日2022-12-20
公開日2023-05-17
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献The catalytic domains of Streptococcus mutans glucosyltransferases: a structural analysis.
Acta Crystallogr.,Sect.F, 79, 2023
6TUZ
DownloadVisualize
BU of 6tuz by Molmil
Theophylline-Notum complex
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, DIMETHYL SULFOXIDE, ...
著者Zhao, Y, Jones, E.Y.
登録日2020-01-08
公開日2020-10-28
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献Caffeine inhibits Notum activity by binding at the catalytic pocket.
Commun Biol, 3, 2020
8TV1
DownloadVisualize
BU of 8tv1 by Molmil
Structure of the EphA2 LBDCRD bound to FabS1C_L1
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Ephrin type-A receptor 2, ...
著者Singer, A.U, Bruce, H.A, Blazer, L, Adams, J.J, Sicheri, F, Sidhu, S.S.
登録日2023-08-17
公開日2024-06-26
最終更新日2025-06-18
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Synthetic antibodies targeting EphA2 induce diverse signaling-competent clusters with differential activation.
Protein Sci., 34, 2025
6Q8C
DownloadVisualize
BU of 6q8c by Molmil
Neisseria gonorrhoeae Leucyl-tRNA Synthetase in Complex with 5'-O-(N-(L-Leucyl)-Sulfamoyl)Uridine
分子名称: 1,2-ETHANEDIOL, 5'-O-(N-(L-Leucyl)-Sulfamoyl)Uridine, Leucine--tRNA ligase, ...
著者Pang, L, De Graef, S, Strelkov, S.V, Weeks, S.D.
登録日2018-12-14
公開日2019-04-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Comparative analysis of pyrimidine substituted aminoacyl-sulfamoyl nucleosides as potential inhibitors targeting class I aminoacyl-tRNA synthetases.
Eur.J.Med.Chem., 173, 2019
1E4N
DownloadVisualize
BU of 1e4n by Molmil
Crystal structure of the inactive mutant Monocot (Maize ZMGlu1) beta-glucosidase ZMGluE191D in complex with the natural aglycone DIMBOA
分子名称: 2,4-DIHYDROXY-7-(METHYLOXY)-2H-1,4-BENZOXAZIN-3(4H)-ONE, BETA-GLUCOSIDASE
著者Czjzek, M, Cicek, M, Bevan, D.R, Zamboni, V, Henrissat, B, Esen, A.
登録日2000-07-11
公開日2000-12-11
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The Mechanism of Substrate (Aglycone) Specificity in Beta -Glucosidases is Revealed by Crystal Structures of Mutant Maize Beta -Glucosidase-Dimboa, -Dimboaglc, and -Dhurrin Complexes
Proc.Natl.Acad.Sci.USA, 97, 2000
5MZ5
DownloadVisualize
BU of 5mz5 by Molmil
Crystal structure of aldehyde dehydrogenase 21 (ALDH21) from Physcomitrella patens in its apoform
分子名称: 1,2-ETHANEDIOL, ALDH21), DI(HYDROXYETHYL)ETHER, ...
著者Kopecny, D, Koncitikova, R, Briozzo, P, Morera, S.
登録日2017-01-30
公開日2017-08-09
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献The ALDH21 gene found in lower plants and some vascular plants codes for a NADP(+) -dependent succinic semialdehyde dehydrogenase.
Plant J., 92, 2017
8WXJ
DownloadVisualize
BU of 8wxj by Molmil
human CLC-1 D136G closed state
分子名称: Chloride channel protein 1, THIOCYANATE ION
著者Zhang, M.F.
登録日2023-10-29
公開日2024-11-06
実験手法ELECTRON MICROSCOPY (2.68 Å)
主引用文献CLC-1 in SCN environment
To Be Published
8Z6B
DownloadVisualize
BU of 8z6b by Molmil
Structure of Polycystin-1/Polycystin-2 complex
分子名称: 1,2-DIOCTANOYL-SN-GLYCERO-3-PHOSPHATE, 2-acetamido-2-deoxy-beta-D-glucopyranose, Polycystin-1, ...
著者Chen, M.Y, Su, Q, Shi, Y.G.
登録日2024-04-18
公開日2025-04-23
最終更新日2025-07-23
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structures of polycystin1/2 complex
To Be Published
8X1G
DownloadVisualize
BU of 8x1g by Molmil
Human adenylate kinase 1 (hAK1) mutant-R97W
分子名称: Adenylate kinase isoenzyme 1
著者Yu, J.
登録日2023-11-07
公開日2024-11-13
実験手法SOLUTION NMR
主引用文献Structure of human adenylate kinase 1 mutant-R97W.
To Be Published

242842

件を2025-10-08に公開中

PDB statisticsPDBj update infoContact PDBjnumon