PDB: 8717 件ウェブページステータス検索Chemie searchBIRD

---

7QWQ	Ternary complex of ribosome nascent chain with SRP and NAC 分子名称: 28S rRNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ... 著者 Jomaa, A, Gamerdinger, M, Hsieh, H, Wallisch, A, Chandrasekaran, V, Ulusoy, Z, Scaiola, A, Hegde, R, Shan, S, Ban, N, Deuerling, E. 登録日 2022-01-25 公開日 2022-03-16 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (2.83 Å) 主引用文献 Mechanism of signal sequence handover from NAC to SRP on ribosomes during ER-protein targeting. Science, 375, 2022
8P2K	Ternary complex of translating ribosome, NAC and METAP1 分子名称: 18s rRNA, 28S rRNA, 40S ribosomal protein S11, ... 著者 Jia, M, Jaskolowski, M, Scaiola, A, Jomaa, A, Ban, N. 登録日 2023-05-16 公開日 2023-07-19 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 NAC controls cotranslational N-terminal methionine excision in eukaryotes. Science, 380, 2023
7W59	The cryo-EM structure of human pre-C*-I complex 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent RNA helicase DHX8, ... 著者 Zhan, X, Lu, Y, Shi, Y. 登録日 2021-11-29 公開日 2022-06-22 最終更新日 2022-08-17 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Mechanism of exon ligation by human spliceosome. Mol.Cell, 82, 2022
6ICZ	Cryo-EM structure of a human post-catalytic spliceosome (P complex) at 3.0 angstrom 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent RNA helicase DHX8, ... 著者 Zhang, X, Zhan, X, Yan, C, Shi, Y. 登録日 2018-09-07 公開日 2019-03-13 最終更新日 2020-10-14 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structures of the human spliceosomes before and after release of the ligated exon. Cell Res., 29, 2019
7W5B	The cryo-EM structure of human C* complex 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent RNA helicase DHX8, ... 著者 Zhan, X, Lu, Y, Shi, Y. 登録日 2021-11-29 公開日 2022-06-22 最終更新日 2022-08-17 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 Mechanism of exon ligation by human spliceosome. Mol.Cell, 82, 2022
6ID0	Cryo-EM structure of a human intron lariat spliceosome prior to Prp43 loaded (ILS1 complex) at 2.9 angstrom resolution 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, CWF19-like protein 2, Cell division cycle 5-like protein, ... 著者 Zhang, X, Zhan, X, Yan, C, Shi, Y. 登録日 2018-09-07 公開日 2019-03-13 最終更新日 2020-10-14 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Structures of the human spliceosomes before and after release of the ligated exon. Cell Res., 29, 2019
6ID1	Cryo-EM structure of a human intron lariat spliceosome after Prp43 loaded (ILS2 complex) at 2.9 angstrom resolution 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, CWF19-like protein 2, Cell division cycle 5-like protein, ... 著者 Zhang, X, Zhan, X, Yan, C, Shi, Y. 登録日 2018-09-07 公開日 2019-03-13 最終更新日 2020-10-14 実験手法 ELECTRON MICROSCOPY (2.86 Å) 主引用文献 Structures of the human spliceosomes before and after release of the ligated exon. Cell Res., 29, 2019
7S9P	Ternary complex of DNA Polymerase Beta with Template Fapy-dG and an incoming dCTP analog 分子名称: 2'-deoxy-5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine, CHLORIDE ION, DNA (5'-D(*CP*CP*GP*AP*CP*(FAP)P*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), ... 著者 Freudenthal, B.D, Ryan, B.J, Smith, M.R. 登録日 2021-09-21 公開日 2022-08-03 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Structural Dynamics of a Common Mutagenic Oxidative DNA Lesion in Duplex DNA and during DNA Replication. J.Am.Chem.Soc., 144, 2022
7S9Q	Ternary complex of DNA Polymerase Beta with Template Fapy-dG and an incoming dATP analog 分子名称: 2'-deoxy-5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]adenosine, DNA (5'-D(*CP*CP*GP*AP*CP*(FAP)P*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3'), ... 著者 Freudenthal, B.D, Ryan, B.J, Smith, M.R. 登録日 2021-09-21 公開日 2022-08-03 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural Dynamics of a Common Mutagenic Oxidative DNA Lesion in Duplex DNA and during DNA Replication. J.Am.Chem.Soc., 144, 2022
4R5P	Crystal structure of HIV-1 reverse transcriptase (RT) with DNA and a nucleoside triphosphate mimic alpha-carboxy nucleoside phosphonate inhibitor 分子名称: 5'-D(*CP*AP*GP*TP*CP*CP*CP*TP*GP*TP*TP*CP*GP*GP*(MRG)P*CP*GP*CP*CP*G)-3', 5'-D(*TP*GP*GP*AP*CP*GP*GP*CP*GP*CP*CP*CP*GP*AP*AP*CP*AP*GP*GP*GP*AP*CP*TP*G)-3', HIV-1 reverse transcriptase, ... 著者 Das, K, Martinez, S.E, Arnold, E. 登録日 2014-08-21 公開日 2015-03-11 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.894 Å) 主引用文献 Alpha-carboxy nucleoside phosphonates as universal nucleoside triphosphate mimics. Proc.Natl.Acad.Sci.USA, 112, 2015
8Q7W	Structure of the recycling U5 snRNP bound to chaperone CD2BP2 (State 3) 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, CD2 antigen cytoplasmic tail-binding protein 2, GUANOSINE-5'-TRIPHOSPHATE, ... 著者 Riabov Bassat, D, Plaschka, C, Vorlaender, M.K. 登録日 2023-08-17 公開日 2024-04-17 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Structural basis of human U5 snRNP late biogenesis and recycling. Nat.Struct.Mol.Biol., 31, 2024
8Q7X	Structure of the recycling U5 snRNP bound to chaperone CD2BP2 (State 4) 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, CD2 antigen cytoplasmic tail-binding protein 2, GUANOSINE-5'-TRIPHOSPHATE, ... 著者 Riabov Bassat, D, Plaschka, C, Vorlaender, M.K. 登録日 2023-08-17 公開日 2024-04-17 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (4.6 Å) 主引用文献 Structural basis of human U5 snRNP late biogenesis and recycling. Nat.Struct.Mol.Biol., 31, 2024
8Q7V	Structure of the recycling U5 snRNP bound to chaperones CD2BP2 and TSSC4 (State 1) 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, CD2 antigen cytoplasmic tail-binding protein 2, GUANOSINE-5'-TRIPHOSPHATE, ... 著者 Riabov Bassat, D, Plaschka, C, Vorlaender, M.K. 登録日 2023-08-17 公開日 2024-04-17 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structural basis of human U5 snRNP late biogenesis and recycling. Nat.Struct.Mol.Biol., 31, 2024
8Q7Q	Structure of the recycling U5 snRNP bound to chaperones CD2BP2 and TSSC4 (State 2) 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, CD2 antigen cytoplasmic tail-binding protein 2, GUANOSINE-5'-TRIPHOSPHATE, ... 著者 Riabov Bassat, D, Plaschka, C, Vorlaender, M.K. 登録日 2023-08-16 公開日 2024-04-17 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structural basis of human U5 snRNP late biogenesis and recycling. Nat.Struct.Mol.Biol., 31, 2024
5YVG	Crystal structure of Karyopherin beta2 in complex with FUS(full length) 分子名称: RNA-binding protein FUS, Transportin-1 著者 Yoshizawa, T, Fung, H.Y.J, Chook, Y.M. 登録日 2017-11-25 公開日 2018-05-16 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (4.05 Å) 主引用文献 Nuclear Import Receptor Inhibits Phase Separation of FUS through Binding to Multiple Sites. Cell, 173, 2018
7AQO	yeast THO-Sub2 complex dimer 分子名称: BJ4_G0025130.mRNA.1.CDS.1, EM14S01-3B_G0007820.mRNA.1.CDS.1, TEX1 isoform 1, ... 著者 Schuller, S.K, Schuller, J.M, Prabu, R.J, Baumgartner, M, Bonneau, F, basquin, J, Conti, E. 登録日 2020-10-22 公開日 2020-12-02 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 Structural insights into the nucleic acid remodeling mechanisms of the yeast THO-Sub2 complex. Elife, 9, 2020
3EVA	Crystal structure of yellow fever virus methyltransferase complexed with S-adenosyl-L-homocysteine 分子名称: RNA-directed RNA polymerase NS5, S-ADENOSYL-L-HOMOCYSTEINE 著者 Thompson, A.A, Geiss, B.J, Peersen, O.B. 登録日 2008-10-13 公開日 2009-01-06 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Analysis of flavivirus NS5 methyltransferase cap binding. J.Mol.Biol., 385, 2009
3EVG	Crystal structure of Dengue-2 virus methyltransferase complexed with S-adenosyl-L-homocysteine 分子名称: RNA-directed RNA polymerase NS5, S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION 著者 Thompson, A.A, Geiss, B.J, Peersen, O.B. 登録日 2008-10-13 公開日 2009-01-06 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Analysis of flavivirus NS5 methyltransferase cap binding. J.Mol.Biol., 385, 2009
5SUQ	Crystal structure of the THO-Sub2 complex 分子名称: 12-TUNGSTOPHOSPHATE, ATP-dependent RNA helicase SUB2, Tex1, ... 著者 Ren, Y, Blobel, G. 登録日 2016-08-03 公開日 2017-01-18 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (6 Å) 主引用文献 Structural and biochemical analyses of the DEAD-box ATPase Sub2 in association with THO or Yra1. Elife, 6, 2017
3EVB	Crystal structure of yellow fever virus methyltransferase complexed with S-adenosyl-L-homocysteine 分子名称: RNA-directed RNA polymerase NS5, S-ADENOSYL-L-HOMOCYSTEINE 著者 Thompson, A.A, Geiss, B.J, Peersen, O.B. 登録日 2008-10-13 公開日 2009-01-06 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Analysis of flavivirus NS5 methyltransferase cap binding. J.Mol.Biol., 385, 2009
2HUA	Solution Structure of CSFV IRES Domain IIa 分子名称: CSFV IRES Domain IIa 著者 Locker, N, Easton, L.E, Lukavsky, P.J. 登録日 2006-07-26 公開日 2007-04-17 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 HCV and CSFV IRES domain II mediate eIF2 release during 80S ribosome assembly. Embo J., 26, 2007
7PRE	Solution structure of the NRDI domain of Nab3 分子名称: HLJ1_G0022400.mRNA.1.CDS.1 著者 Chaves-Arquero, B, Martinez-Lumbreras, S, Perez-Canadillas, J.M. 登録日 2021-09-21 公開日 2022-01-12 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 Structural basis of Nrd1-Nab3 heterodimerization. Life Sci Alliance, 5, 2022
7Z27	Crystal structure of the SPOC domain of human RBM15 分子名称: RNA-binding protein 15 著者 Grishkovskaya, I, Appel, L.M, Djinovic-Carugo, K, Slade, D. 登録日 2022-02-25 公開日 2022-12-07 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 The SPOC domain is a phosphoserine binding module that bridges transcription machinery with co- and post-transcriptional regulators. Nat Commun, 14, 2023
3PMN	ternary crystal structure of polymerase lambda variant with a GT mispair at the primer terminus with Mn2+ in the active site 分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]guanosine, 5'-D(*CP*AP*GP*TP*AP*G)-3', 5'-D(*CP*GP*GP*CP*CP*TP*TP*AP*CP*TP*G)-3', ... 著者 Bebenek, K, Pedersen, L.C, Kunkel, T.A. 登録日 2010-11-17 公開日 2011-02-02 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Replication infidelity via a mismatch with Watson-Crick geometry. Proc.Natl.Acad.Sci.USA, 108, 2011
1NBS	Crystal structure of the specificity domain of Ribonuclease P RNA 分子名称: LEAD (II) ION, MAGNESIUM ION, RIBONUCLEASE P RNA 著者 Krasilnikov, A.S, Yang, X, Pan, T, Mondragon, A. 登録日 2002-12-03 公開日 2003-02-18 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (3.15 Å) 主引用文献 Crystal structure of the specificity domain of Ribonuclease P Nature, 421, 2003

<84858687888990919293949596979899>