PDB: 48062 件ウェブページステータス検索Chemie searchBIRD

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5JQ1	Efficient targeting of the asialoglycoprotein receptor by polyvalent display of a compact galactosamine mimic 分子名称: Asialoglycoprotein receptor 1, CALCIUM ION, CHLORIDE ION, ... 著者 Liu, S. 登録日 2016-05-04 公開日 2017-06-14 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.83 Å) 主引用文献 Efficient Liver Targeting by Polyvalent Display of a Compact Ligand for the Asialoglycoprotein Receptor. J. Am. Chem. Soc., 139, 2017
5JXF	Crystal structure of Flavobacterium psychrophilum DPP11 in complex with dipeptide Arg-Asp 分子名称: ARGININE, ASPARTIC ACID, Asp/Glu-specific dipeptidyl-peptidase, ... 著者 Bezerra, G.A, Fedosyuk, S, Ohara-Nemoto, Y, Nemoto, T.K, Djinovic-Carugo, K. 登録日 2016-05-13 公開日 2017-06-14 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Bacterial protease uses distinct thermodynamic signatures for substrate recognition. Sci Rep, 7, 2017
5JSS	Thermolysin in complex with JC149. 分子名称: CALCIUM ION, DIMETHYL SULFOXIDE, GLYCEROL, ... 著者 Krimmer, S.G, Cramer, J, Heine, A, Klebe, G. 登録日 2016-05-09 公開日 2016-12-21 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.19 Å) 主引用文献 Rational Design of Thermodynamic and Kinetic Binding Profiles by Optimizing Surface Water Networks Coating Protein-Bound Ligands. J. Med. Chem., 59, 2016
5JT6	tRNA guanine Transglycosylase (TGT) in co-crystallized complex with 2-((2-morpholinoethyl)amino)-1H-benzo[d]imidazole-5-carbohydrazide 分子名称: 2-{[2-(morpholin-4-yl)ethyl]amino}-1H-benzimidazole-6-carbohydrazide, CHLORIDE ION, GLYCEROL, ... 著者 Ehrmann, F.R, Heine, A, Klebe, G. 登録日 2016-05-09 公開日 2017-05-24 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.54 Å) 主引用文献 Benzimidazole-based Inhibitors as a Novel Scaffold to Inhibit Z.mobilis TGT and Study Protein Flexibility and the Contributions of Active Site Residues to Binding Affinity of lin-Benzopurines. To be Published
5JZ8	Aspartyl/Asparaginyl beta-hydroxylase (AspH)oxygenase and TPR domains in complex with manganese, N-oxalylglycine, and factor X substrate peptide fragment (39mer) 分子名称: ACETATE ION, Aspartyl/asparaginyl beta-hydroxylase, Coagulation factor X, ... 著者 McDonough, M.A, Pfeffer, I. 登録日 2016-05-16 公開日 2017-05-24 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.095 Å) 主引用文献 Aspartate/asparagine-beta-hydroxylase crystal structures reveal an unexpected epidermal growth factor-like domain substrate disulfide pattern. Nat Commun, 10, 2019
5K1V	Crystal structure of Endoplasmic Reticulum aminopeptidase 2 (ERAP2) in complex with a diaminobenzoic acid derivative ligand. 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Endoplasmic reticulum aminopeptidase 2, ... 著者 Saridakis, E, Papakyriakou, A, Giastas, P, Mpakali, A, Mavridis, I.M, Stratikos, E. 登録日 2016-05-18 公開日 2017-03-29 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (2.897 Å) 主引用文献 Crystal Structures of ERAP2 Complexed with Inhibitors Reveal Pharmacophore Requirements for Optimizing Inhibitor Potency. ACS Med Chem Lett, 8, 2017
5K2M	Bifunctional LysX/ArgX from Thermococcus kodakarensis with LysW-gamma-AAA 分子名称: 2-AMINOHEXANEDIOIC ACID, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... 著者 Yoshida, A, Tomita, T, Nishiyama, M. 登録日 2016-05-19 公開日 2016-09-07 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.18 Å) 主引用文献 Lysine Biosynthesis of Thermococcus kodakarensis with the Capacity to Function as an Ornithine Biosynthetic System. J. Biol. Chem., 291, 2016
5JT9	Thermolysin in complex with JC106. 分子名称: CALCIUM ION, DIMETHYL SULFOXIDE, GLYCEROL, ... 著者 Krimmer, S.G, Cramer, J, Heine, A, Klebe, G. 登録日 2016-05-09 公開日 2016-12-21 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.26 Å) 主引用文献 Rational Design of Thermodynamic and Kinetic Binding Profiles by Optimizing Surface Water Networks Coating Protein-Bound Ligands. J. Med. Chem., 59, 2016
5JVY	Crystal structure of S121P murine COX-2 mutant 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACRYLIC ACID, ... 著者 Orlando, B.J, Malkowski, M.G, Dong, L. 登録日 2016-05-11 公開日 2016-10-26 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.36 Å) 主引用文献 Fatty Acid Binding to the Allosteric Subunit of Cyclooxygenase-2 Relieves a Tonic Inhibition of the Catalytic Subunit. J.Biol.Chem., 291, 2016
5JXN	Thermolysin in complex with JC240. 分子名称: CALCIUM ION, DIMETHYL SULFOXIDE, GLYCEROL, ... 著者 Krimmer, S.G, Cramer, J, Heine, A, Klebe, G. 登録日 2016-05-13 公開日 2016-12-21 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.38 Å) 主引用文献 Rational Design of Thermodynamic and Kinetic Binding Profiles by Optimizing Surface Water Networks Coating Protein-Bound Ligands. J. Med. Chem., 59, 2016
5K1A	Crystal structure of the UAF1-USP12 complex in C2 space group 分子名称: Ubiquitin carboxyl-terminal hydrolase 12, WD repeat-containing protein 48, ZINC ION 著者 Li, H, D'Andrea, A.D, Zheng, N. 登録日 2016-05-18 公開日 2016-07-20 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Allosteric Activation of Ubiquitin-Specific Proteases by beta-Propeller Proteins UAF1 and WDR20. Mol.Cell, 63, 2016
5K1N	Human TTR altered by a rhenium tris-carbonyl Pyta-C12 derivative 分子名称: 1,2-ETHANEDIOL, ACETATE ION, DI(HYDROXYETHYL)ETHER, ... 著者 Stura, E.A, Ciccone, L, Shepard, W. 登録日 2016-05-18 公開日 2016-07-20 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.81 Å) 主引用文献 Human TTR conformation altered by rhenium tris-carbonyl derivatives. J.Struct.Biol., 195, 2016
5K3I	Crystal structure of Acyl-CoA oxidase-1 in Caenorhabditis elegans complexed with FAD and ATP 分子名称: ADENOSINE-5'-TRIPHOSPHATE, Acyl-coenzyme A oxidase, FLAVIN-ADENINE DINUCLEOTIDE, ... 著者 Zhang, X, Li, K, Jones, R.A, Bruner, S.D, Butcher, R.A. 登録日 2016-05-19 公開日 2016-08-24 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.683 Å) 主引用文献 Structural characterization of acyl-CoA oxidases reveals a direct link between pheromone biosynthesis and metabolic state in Caenorhabditis elegans. Proc.Natl.Acad.Sci.USA, 113, 2016
5K9W	Protein Tyrosine Phosphatase 1B (1-301) in complex with TCS401, closed state 分子名称: 2-(OXALYL-AMINO)-4,5,6,7-TETRAHYDRO-THIENO[2,3-C]PYRIDINE-3-CARBOXYLIC ACID, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, ... 著者 Choy, M.S, Peti, W, Page, R. 登録日 2016-06-01 公開日 2017-03-01 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.01 Å) 主引用文献 Conformational Rigidity and Protein Dynamics at Distinct Timescales Regulate PTP1B Activity and Allostery. Mol. Cell, 65, 2017
5K56	Human muscle fructose-1,6-bisphosphatase in active R-state in complex with fructose-1,6-bisphosphate 分子名称: 1,6-di-O-phosphono-beta-D-fructofuranose, Fructose-1,6-bisphosphatase isozyme 2 著者 Barciszewski, J, Wisniewski, J, Kolodziejczyk, R, Dzugaj, A, Jaskolski, M, Rakus, D. 登録日 2016-05-23 公開日 2017-06-07 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.198 Å) 主引用文献 Structural studies of human muscle FBPase To Be Published
5K7M	Crystal structure of the catalytic domains of Mettl3/Mettl14 complex 分子名称: N6-adenosine-methyltransferase 70 kDa subunit, N6-adenosine-methyltransferase subunit METTL14 著者 Wang, P, Doxtader, K.A, Nam, Y. 登録日 2016-05-26 公開日 2016-07-06 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Structural Basis for Cooperative Function of Mettl3 and Mettl14 Methyltransferases. Mol.Cell, 63, 2016
5K8N	5NAA-bound 5-nitroanthranilate aminohydrolase 分子名称: 5-nitroanthranilic acid, 5-nitroanthranilic acid aminohydrolase 著者 Kalyoncu, S. 登録日 2016-05-30 公開日 2016-10-05 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (3.225 Å) 主引用文献 Enzymatic hydrolysis by transition-metal-dependent nucleophilic aromatic substitution. Nat.Chem.Biol., 12, 2016
5KA0	Protein Tyrosine Phosphatase 1B Delta helix 7, open state 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, GLYCEROL, ... 著者 Choy, M.S, Peti, W, Page, R. 登録日 2016-06-01 公開日 2017-03-01 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.991 Å) 主引用文献 Conformational Rigidity and Protein Dynamics at Distinct Timescales Regulate PTP1B Activity and Allostery. Mol. Cell, 65, 2017
5JSX	Crystal structure of glucosyl-3-phosphoglycerate synthase from Mycobacterium tuberculosis in complex with Mn2+ and uridine-diphosphate-glucose (UDP-Glc) 分子名称: GLYCEROL, MANGANESE (II) ION, URIDINE-5'-DIPHOSPHATE-GLUCOSE, ... 著者 Albesa-Jove, D, Sancho-Vaello, E, Rodrigo-Unzueta, A, Comino, N, Carreras-Gonzalez, A, Arrasate, P, Urresti, S, Guerin, M.E. 登録日 2016-05-09 公開日 2017-05-24 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.81 Å) 主引用文献 Structural Snapshots and Loop Dynamics along the Catalytic Cycle of Glycosyltransferase GpgS. Structure, 25, 2017
5JTC	Aspartyl/Asparaginyl beta-hydroxylase (AspH)oxygenase and TPR domains in complex with manganese, 2,4-pyridine dicarboxylate and factor X substrate peptide fragment(39mer-4Ser) 分子名称: Aspartyl/asparaginyl beta-hydroxylase, BROMIDE ION, Coagulation factor X, ... 著者 McDonough, M.A, Pfeffer, I. 登録日 2016-05-09 公開日 2017-05-24 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.24 Å) 主引用文献 Aspartate/asparagine-beta-hydroxylase: a high-throughput mass spectrometric assay for discovery of small molecule inhibitors. Sci Rep, 10, 2020
5JQB	Crystal structure of Ebola glycoprotein in complex with ibuprofen 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein 1,Envelope glycoprotein 1,Envelope glycoprotein 1, Envelope glycoprotein 2, ... 著者 Zhao, Y, Ren, J, Stuart, D.I. 登録日 2016-05-04 公開日 2016-06-29 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.68 Å) 主引用文献 Toremifene interacts with and destabilizes the Ebola virus glycoprotein. Nature, 535, 2016
5JVZ	Crystal structure of flurbiprofen bound to S121P murine COX-2 mutant 分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Malkowski, M.G, Orlando, B.J. 登録日 2016-05-11 公開日 2016-10-26 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.62 Å) 主引用文献 Fatty Acid Binding to the Allosteric Subunit of Cyclooxygenase-2 Relieves a Tonic Inhibition of the Catalytic Subunit. J.Biol.Chem., 291, 2016
5JYG	Cryo-EM structure of the MamK filament at 6.5 A 分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin-like ATPase, MAGNESIUM ION 著者 Bergeron, J.R.C, Hutto, R, Kollman, J.M. 登録日 2016-05-13 公開日 2016-07-27 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (6.5 Å) 主引用文献 Structure of the magnetosome-associated actin-like MamK filament at subnanometer resolution. Protein Sci., 26, 2017
5JUD	Crystal structure of glucosyl-3-phosphoglycerate synthase from Mycobacterium tuberculosis in complex with uridine-diphosphate (UDP) - GpgS*UDP 分子名称: Glucosyl-3-phosphoglycerate synthase, URIDINE-5'-DIPHOSPHATE 著者 Albesa-Jove, D, Sancho-Vaello, E, Rodrigo-Unzueta, A, Comino, N, Carreras-Gonzalez, A, Arrasate, P, Urresti, S, Guerin, M.E. 登録日 2016-05-10 公開日 2017-05-24 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.59 Å) 主引用文献 Structural Snapshots and Loop Dynamics along the Catalytic Cycle of Glycosyltransferase GpgS. Structure, 25, 2017
5K4Z	M. thermoresistible IMPDH in complex with IMP and Compound 6 分子名称: INOSINIC ACID, Inosine-5'-monophosphate dehydrogenase,Inosine-5'-monophosphate dehydrogenase, ~{N}-(4-fluorophenyl)-4-(2~{H}-indazol-6-ylsulfamoyl)-3,5-dimethyl-1~{H}-pyrrole-2-carboxamide 著者 Pacitto, A, Ascher, D.B, Blundell, T.L. 登録日 2016-05-22 公開日 2016-10-19 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.64 Å) 主引用文献 Essential but Not Vulnerable: Indazole Sulfonamides Targeting Inosine Monophosphate Dehydrogenase as Potential Leads against Mycobacterium tuberculosis. ACS Infect Dis, 3, 2017

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