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1M1G
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Crystal Structure of Aquifex aeolicus N-utilization substance G (NusG), Space Group P2(1)
分子名称: Transcription antitermination protein nusG
著者Steiner, T, Kaiser, J.T, Marinkovic, S, Huber, R, Wahl, M.C.
登録日2002-06-19
公開日2003-02-04
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of transcription factor NusG in light of its nucleic acid- and protein-binding activities
Embo J., 21, 2002
1M1H
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Crystal structure of Aquifex aeolicus N-utilization substance G (NusG), Space group I222
分子名称: Transcription antitermination protein nusG
著者Steiner, T, Kaiser, J.T, Marinkovic, S, Huber, R, Wahl, M.C.
登録日2002-06-19
公開日2003-02-04
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structures of transcription factor NusG in light of its nucleic acid- and protein-binding activities
Embo J., 21, 2002
4V5C
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BU of 4v5c by Molmil
Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.
分子名称: 16S ribosomal RNA, 23S Ribosomal RNA, 30S RIBOSOMAL PROTEIN S10, ...
著者Voorhees, R.M, Weixlbaumer, A, Loakes, D, Kelley, A.C, Ramakrishnan, V.
登録日2009-03-24
公開日2014-07-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Insights Into Substrate Stabilization from Snapshots of the Peptidyl Transferase Center of the Intact 70S Ribosome
Nat.Struct.Mol.Biol., 16, 2009
4V5D
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Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.
分子名称: 16S ribosomal RNA, 23S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ...
著者Voorhees, R.M, Weixlbaumer, A, Loakes, D, Kelley, A.C, Ramakrishnan, V.
登録日2009-03-24
公開日2014-07-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Insights into substrate stabilization from snapshots of the peptidyl transferase center of the intact 70S ribosome.
Nat. Struct. Mol. Biol., 16, 2009
9EMC
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BU of 9emc by Molmil
RUVBL1/2 in complex with ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, RuvB-like 1, ...
著者Lopez-Perrote, A, Llorca, O, Garcia-Martin, C.
登録日2024-03-11
公開日2024-05-15
実験手法ELECTRON MICROSCOPY (3.26 Å)
主引用文献Mechanism of allosteric inhibition of RUVBL1-RUVBL2 by the small-molecule CB-6644
Cell Rep Phys Sci, 2024
8CYI
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BU of 8cyi by Molmil
Cryo-EM structures and computational analysis for enhanced potency in MTA-synergic inhibition of human protein arginine methyltransferase 5
分子名称: 5'-DEOXY-5'-METHYLTHIOADENOSINE, Methylosome protein 50, N-[(2-aminoquinolin-7-yl)methyl]-9-(2-hydroxyethyl)-2,3,4,9-tetrahydro-1H-carbazole-6-carboxamide, ...
著者Yadav, G.P, Wei, Z, Xiaozhi, Y, Chenglong, L, Jiang, Q.
登録日2022-05-23
公開日2023-04-12
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.14 Å)
主引用文献Cryo-EM structure-based selection of computed ligand poses enables design of MTA-synergic PRMT5 inhibitors of better potency.
Commun Biol, 5, 2022
9BDN
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80S ribosome with angiogenin and tRNAAla
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ...
著者Loveland, A.B, Korostelev, A.A.
登録日2024-04-12
公開日2024-07-24
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural mechanism of angiogenin activation by the ribosome.
Nature, 630, 2024
9BDP
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BU of 9bdp by Molmil
80S ribosome bound with angiogenin and complex of eEF1A and Ala-tRNAAla
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ...
著者Loveland, A.B, Korostelev, A.A.
登録日2024-04-12
公開日2024-07-24
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural mechanism of angiogenin activation by the ribosome.
Nature, 630, 2024
9BDL
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BU of 9bdl by Molmil
80S ribosome with angiogenin
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ...
著者Loveland, A.B, Korostelev, A.A.
登録日2024-04-12
公開日2024-07-24
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structural mechanism of angiogenin activation by the ribosome.
Nature, 630, 2024
5LYB
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BU of 5lyb by Molmil
Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn
分子名称: 18S rRNA, 25S rRNA, 40S Ribosomal Protein S12, ...
著者Melnikov, S, Mailliot, J.
登録日2016-09-26
公開日2016-11-23
最終更新日2016-12-14
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Molecular insights into protein synthesis with proline residues.
EMBO Rep., 17, 2016
6JXV
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SUMO1 bound to phosphorylated SLS4-SIM peptide from ICP0
分子名称: Phosphorylated SLS4-SIM from ubiquitin E3 ligase ICP0, Small ubiquitin-related modifier
著者Hembram, D.S.S, Negi, H, Shet, D, Das, R.
登録日2019-04-25
公開日2020-02-05
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献The Viral SUMO-Targeted Ubiquitin Ligase ICP0 is Phosphorylated and Activated by Host Kinase Chk2.
J.Mol.Biol., 432, 2020
6JXU
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BU of 6jxu by Molmil
SUMO1 bound to SLS4-SIM peptide from ICP0
分子名称: Small ubiquitin-related modifier, viral protein
著者Hembram, D.S.S, Negi, H, Shet, D, Das, R.
登録日2019-04-25
公開日2020-02-05
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The Viral SUMO-Targeted Ubiquitin Ligase ICP0 is Phosphorylated and Activated by Host Kinase Chk2.
J.Mol.Biol., 432, 2020
3KZ3
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BU of 3kz3 by Molmil
A structure of a lambda repressor fragment mutant
分子名称: Repressor protein CI
著者Gruebele, M, Liu, F, Gao, Y.
登録日2009-12-07
公開日2010-02-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献A survey of lambda repressor fragments from two-state to downhill folding.
J.Mol.Biol., 397, 2010
5WM9
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BU of 5wm9 by Molmil
Crystal Structure of TetR family regulator Rv0078 from Mycobacterium tuberculosis
分子名称: Rv0078, SULFATE ION
著者Hsu, H.C, Li, H.
登録日2017-07-28
公開日2018-07-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.85000288 Å)
主引用文献Cytokinin Signaling in Mycobacterium tuberculosis.
MBio, 9, 2018
2FQ4
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BU of 2fq4 by Molmil
The crystal structure of the transcriptional regulator (TetR family) from Bacillus cereus
分子名称: Transcriptional regulator, TetR family
著者Zhang, R, Wu, R, Moy, S, Cymborowski, M, Minor, W, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2006-01-17
公開日2006-02-28
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献The crystal structure of the transcriptional regulator (TetR family) from Bacillus cereus
To be Published
2G9A
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BU of 2g9a by Molmil
Structural basis for the specific recognition of methylated histone H3 lysine 4 by the WD-40 protein WDR5
分子名称: Histone H3, WD-repeat protein 5
著者Chai, J, Han, Z, Wang, H, Shen, Y.
登録日2006-03-06
公開日2006-09-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis for the specific recognition of methylated histone H3 lysine 4 by the WD-40 protein WDR5
To be published
5WJJ
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BU of 5wjj by Molmil
Structure-based Design, Synthesis, and Biological Evaluation of Imidazo[1,2-b]pyridazine-based p38 MAP Kinase Inhibitors
分子名称: Mitogen-activated protein kinase 14, N-{4-[2-(4-fluoro-3-methylphenyl)imidazo[1,2-b]pyridazin-3-yl]pyridin-2-yl}-2-methyl-1-oxo-1lambda~5~-pyridine-4-carboxamide
著者Snell, G.P, Okada, K, Bragstad, K, Sang, B.-C.
登録日2017-07-23
公開日2018-01-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure-based design, synthesis, and biological evaluation of imidazo[1,2-b]pyridazine-based p38 MAP kinase inhibitors.
Bioorg. Med. Chem., 26, 2018
4V2F
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BU of 4v2f by Molmil
Tetracycline repressor TetR(D), unliganded
分子名称: TETRACYCLINE REPRESSOR PROTEIN CLASS D
著者Werten, S, Orth, P, Saenger, W, Hinrichs, W.
登録日2014-10-09
公開日2014-12-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Tetracycline Repressor Allostery Does not Depend on Divalent Metal Recognition.
Biochemistry, 53, 2014
4V2G
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Tetracycline repressor TetR(D) bound to chlortetracycline and iso- chlortetracycline
分子名称: 7-CHLOROTETRACYCLINE, ISO-7-CHLORTETRACYCLINE, MAGNESIUM ION, ...
著者Werten, S, Orth, P, Saenger, W, Hinrichs, W.
登録日2014-10-09
公開日2014-12-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献Tetracycline Repressor Allostery Does not Depend on Divalent Metal Recognition.
Biochemistry, 53, 2014
7QP7
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BU of 7qp7 by Molmil
Structure of the human 48S initiation complex in closed state (h48S AUG closed)
分子名称: 18S rRNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
著者Yi, S.-H, Petrychenko, V, Schliep, J.E, Goyal, A, Linden, A, Chari, A, Urlaub, H, Stark, H, Rodnina, M.V, Adio, S, Fischer, N.
登録日2022-01-03
公開日2022-05-11
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Conformational rearrangements upon start codon recognition in human 48S translation initiation complex.
Nucleic Acids Res., 50, 2022
7QP6
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BU of 7qp6 by Molmil
Structure of the human 48S initiation complex in open state (h48S AUG open)
分子名称: 18S rRNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
著者Yi, S.-H, Petrychenko, V, Schliep, J.E, Goyal, A, Linden, A, Chari, A, Urlaub, H, Stark, H, Rodnina, M.V, Adio, S, Fischer, N.
登録日2022-01-03
公開日2022-05-11
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (4.7 Å)
主引用文献Conformational rearrangements upon start codon recognition in human 48S translation initiation complex.
Nucleic Acids Res., 50, 2022
7WVK
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BU of 7wvk by Molmil
Crystal structure of human WDR5 in complex with compound 19
分子名称: 1,2-ETHANEDIOL, 1-[2,5-bis(chloranyl)phenyl]sulfonylbenzimidazole, GLYCEROL, ...
著者Han, Q.L, Zhang, X.L, Wang, L, Ren, P.X, Cao, Y, Li, K, Bai, F.
登録日2022-02-10
公開日2022-10-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Discovery, evaluation and mechanism study of WDR5-targeted small molecular inhibitors for neuroblastoma.
Acta Pharmacol.Sin., 44, 2023
6L94
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The structure of the dioxygenase ABH1 from mouse
分子名称: FE (II) ION, Nucleic acid dioxygenase ALKBH1
著者Xie, W, Wang, C, Li, H, Zhang, Y.
登録日2019-11-08
公開日2020-11-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.10012341 Å)
主引用文献ALKBH1 promotes lung cancer by regulating m6A RNA demethylation.
Biochem Pharmacol, 189, 2021
6UGH
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BU of 6ugh by Molmil
Cryo-EM structure of the apo form of human PRMT5:MEP50 complex at a resolution of 3.4 angstrom
分子名称: Methylosome protein 50, Protein arginine N-methyltransferase 5
著者Zhou, W, Yadav, G.P, Jiang, Q.-X, Li, C.
登録日2019-09-26
公開日2020-12-09
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献A 3.4-angstrom cryo-EM structure of the apo form of hu-man PRMT5:MEP50 complex reveals sequential catalysis of symmetric methyl transfer
To Be Published
7PJY
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Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 1 (CHI1-EF-G-GDP)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Petrychenko, V, Peng, B.Z, Schwarzer, A.C, Peske, F, Rodnina, M.V, Fischer, N.
登録日2021-08-24
公開日2021-10-20
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural mechanism of GTPase-powered ribosome-tRNA movement.
Nat Commun, 12, 2021

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