PDB: 41522 件ウェブページステータス検索Chemie searchBIRD

---

6BYH	Ubiquitin Variant (UbV.Fl11.1) bound to a human Skp1-Fbl11 fragment complex. 分子名称: Lysine-specific demethylase 2A, Polyubiquitin-B, S-phase kinase-associated protein 1 著者 Manczyk, N, Sicheri, F. 登録日 2017-12-20 公開日 2018-07-18 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.61 Å) 主引用文献 A Structure-Based Strategy for Engineering Selective Ubiquitin Variant Inhibitors of Skp1-Cul1-F-Box Ubiquitin Ligases. Structure, 26, 2018
8SZK	The cryo-EM structure of PPP2R5A/HIV-1 Vif/CBFb/EloB/EloC complex 分子名称: Core-binding factor subunit beta, Elongin-B, Elongin-C, ... 著者 Hu, Y, Xiong, Y. 登録日 2023-05-30 公開日 2024-06-05 実験手法 ELECTRON MICROSCOPY (3.58 Å) 主引用文献 Structural insights into PPP2R5A degradation by HIV-1 Vif. Nat.Struct.Mol.Biol., 2024
6WRZ	Crystal Structure of Nsp16-Nsp10 Heterodimer from SARS-CoV-2 with 7-methyl-GpppA and S-adenosyl-L-homocysteine in the Active Site and Sulfates in the mRNA Binding Groove. 分子名称: 2'-O-methyltransferase, 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, ... 著者 Minasov, G, Shuvalova, L, Rosas-Lemus, M, Brunzelle, J.S, Kiryukhina, O, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2020-04-30 公開日 2020-05-13 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 High-resolution structures of the SARS-CoV-2 2'- O -methyltransferase reveal strategies for structure-based inhibitor design. Sci.Signal., 13, 2020
5MM1	Dolichyl phosphate mannose synthase in complex with GDP and dolichyl phosphate mannose 分子名称: Dolichol monophosphate mannose synthase, GUANOSINE-5'-DIPHOSPHATE, dolichyl phosphate mannose 著者 Gandini, R, Reichenbach, T, Tan, T.C, Divne, C. 登録日 2016-12-08 公開日 2017-08-09 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structural basis for dolichylphosphate mannose biosynthesis. Nat Commun, 8, 2017
5ME5	Crystal Structure of eiF4E from C. melo bound to a eIF4G peptide 分子名称: Eukaryotic transcription initiation factor 4E, SULFATE ION, eIF4G 著者 Querol-Audi, J, Silva, C, Miras, M, Truniger, V, Aranda-Regules, M, Verdaguer, N. 登録日 2016-11-14 公開日 2017-08-23 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure of eIF4E in Complex with an eIF4G Peptide Supports a Universal Bipartite Binding Mode for Protein Translation. Plant Physiol., 174, 2017
5ME9	Crystal structure of yeast Cdt1 (N terminal and middle domain), form 1. 分子名称: Cell division cycle protein CDT1, GLYCEROL, SULFATE ION 著者 Pye, V.E, Frigola, J, Diffley, J.F.X, Cherepanov, P. 登録日 2016-11-14 公開日 2017-05-17 最終更新日 2017-07-05 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Cdt1 stabilizes an open MCM ring for helicase loading. Nat Commun, 8, 2017
6TMH	Cryo-EM structure of Toxoplasma gondii mitochondrial ATP synthase dimer, OSCP/F1/c-ring model 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase subunit alpha,subunit alpha, ... 著者 Muhleip, A, Kock Flygaard, R, Amunts, A. 登録日 2019-12-04 公開日 2020-12-16 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 ATP synthase hexamer assemblies shape cristae of Toxoplasma mitochondria. Nat Commun, 12, 2021
7LUR	Stable Effector Functionless 2 (SEFL2) IgG1 Fc Scaffold Bound to a Minimized Version of the B-domain (Mini-Z) from Protein A Called Z34C 分子名称: Immunoglobulin heavy constant gamma 1, Mini Z domain 著者 Sudom, A, Garces, F, Wang, Z. 登録日 2021-02-23 公開日 2021-09-15 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Next generation Fc scaffold for multispecific antibodies. Iscience, 24, 2021
6TEH	Baseplate of native GTA particle computed with C3 symmetry 分子名称: IRON/SULFUR CLUSTER, Putative gene transfer agent protein 著者 Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P. 登録日 2019-11-12 公開日 2020-07-22 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3.99 Å) 主引用文献 Structure and mechanism of DNA delivery of a gene transfer agent. Nat Commun, 11, 2020
6S2E	Cryo-EM structure of Ctf18-1-8 in complex with the catalytic domain of DNA polymerase epsilon 分子名称: Chromosome transmission fidelity protein 18, Chromosome transmission fidelity protein 8, DNA polymerase epsilon catalytic subunit A, ... 著者 Grabarczyk, D.B, Song, B. 登録日 2019-06-20 公開日 2020-07-08 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Ctf18-RFC and DNA Pol ε form a stable leading strand polymerase/clamp loader complex required for normal and perturbed DNA replication. Nucleic Acids Res., 48, 2020
6S2F	Cryo-EM structure of Ctf18-1-8 in complex with the catalytic domain of DNA polymerase epsilon (Class 2) 分子名称: Chromosome transmission fidelity protein 18, Chromosome transmission fidelity protein 8, DNA polymerase epsilon catalytic subunit A, ... 著者 Grabarczyk, D.B, Song, B. 登録日 2019-06-20 公開日 2020-07-08 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (5.8 Å) 主引用文献 Ctf18-RFC and DNA Pol ε form a stable leading strand polymerase/clamp loader complex required for normal and perturbed DNA replication. Nucleic Acids Res., 48, 2020
6BX5	The crystal structure of fluoride channel Fluc Ec2 with Monobody S12 分子名称: FLUORIDE ION, Monobody S12, Putative fluoride ion transporter CrcB, ... 著者 Turman, D.L, Miller, C. 登録日 2017-12-17 公開日 2018-02-14 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Molecular Interactions between a Fluoride Ion Channel and Synthetic Protein Blockers. Biochemistry, 57, 2018
1GUT	MopII from Clostridium pasteurianum (apo2) 分子名称: CHLORIDE ION, MAGNESIUM ION, MOLYBDATE BINDING PROTEIN II 著者 Schuettelkopf, A.W, Harrison, J.A, Hunter, W.N. 登録日 2002-01-28 公開日 2002-02-08 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Passive Acquisition of Ligand by the Mopii Molbindin from Clostridium Pasteurianum: Structures of Apo and Oxyanion-Bound Forms J.Biol.Chem., 277, 2002
7LSW	Structure of Full Beta-Hairpin LIR from FNIP2 Bound to GABARAP 分子名称: Folliculin-interacting protein 2,Gamma-aminobutyric acid receptor-associated protein, SULFATE ION 著者 Appleton, B.A. 登録日 2021-02-18 公開日 2021-10-13 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (3.05 Å) 主引用文献 GABARAP sequesters the FLCN-FNIP tumor suppressor complex to couple autophagy with lysosomal biogenesis. Sci Adv, 7, 2021
5L0F	Human metavinculin quadruple mutant (residues 959-1134) 分子名称: GLYCEROL, Vinculin 著者 Chinthalapudi, K, Izard, T. 登録日 2016-07-27 公開日 2016-08-31 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.76 Å) 主引用文献 Differential lipid binding of vinculin isoforms promotes quasi-equivalent dimerization. Proc.Natl.Acad.Sci.USA, 113, 2016
6O0O	crystal structure of BCL-2 G101V mutation with S55746 分子名称: Apoptosis regulator Bcl-2,Bcl-2-like protein 1,Apoptosis regulator Bcl-2, ~{N}-(4-hydroxyphenyl)-3-[6-[[(3~{S})-3-(morpholin-4-ylmethyl)-3,4-dihydro-1~{H}-isoquinolin-2-yl]carbonyl]-1,3-benzodioxol-5-yl]-~{N}-phenyl-5,6,7,8-tetrahydroindolizine-1-carboxamide 著者 Birkinshaw, R.W, Luo, C.S, Colman, P.M, Czabotar, P.E. 登録日 2019-02-17 公開日 2019-05-22 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.998 Å) 主引用文献 Structures of BCL-2 in complex with venetoclax reveal the molecular basis of resistance mutations. Nat Commun, 10, 2019
6RJF	Echovirus 1 intact particle 分子名称: PALMITIC ACID, VP1, VP2, ... 著者 Domanska, A, Ruokolainen, V.P, Pelliccia, M, Laajala, M.A, Marjomaki, V.S, Butcher, S.J. 登録日 2019-04-26 公開日 2019-06-12 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Extracellular Albumin and Endosomal Ions Prime Enterovirus Particles for Uncoating That Can Be Prevented by Fatty Acid Saturation. J.Virol., 93, 2019
5KLC	Structure of CBM_E1, a novel carbohydrate-binding module found by sugar cane soil metagenome 分子名称: Carbohydrate binding module E1 著者 Liberato, M.V, Campos, B.M, Zeri, A.C.M, Squina, F.M. 登録日 2016-06-24 公開日 2016-09-21 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.746 Å) 主引用文献 A Novel Carbohydrate-binding Module from Sugar Cane Soil Metagenome Featuring Unique Structural and Carbohydrate Affinity Properties. J.Biol.Chem., 291, 2016
6IAA	hRobo2 ectodomain 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Roundabout homolog 2, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 著者 Barak, R, Isupov, N.M, Opatowsky, Y. 登録日 2018-11-26 公開日 2019-03-13 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 Structural Principles in Robo Activation and Auto-inhibition. Cell, 177, 2019
5N72	Crystal structure of the Legionella effector WipA shorter construct 分子名称: ACETATE ION, WipA 著者 Pinotsis, N, Waksman, G. 登録日 2017-02-17 公開日 2017-04-19 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.842 Å) 主引用文献 Structure of the WipA protein reveals a novel tyrosine protein phosphatase effector from Legionella pneumophila. J. Biol. Chem., 292, 2017
5KMX	Structure of Trypanosoma congolense Insect Stage Antigen 分子名称: GLYCEROL, Putative uncharacterized protein TCIL3000_10_9440, SULFATE ION 著者 Ramaswamy, R, Parker, M.L, Boulanger, M.J. 登録日 2016-06-27 公開日 2017-07-05 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.452 Å) 主引用文献 Structural characterization reveals a novel bilobed architecture for the ectodomains of insect stage expressed Trypanosoma brucei PSSA-2 and Trypanosoma congolense ISA. Protein Sci., 25, 2016
5KK4	Crystal Structure of the Plant Defensin NsD7 bound to Phosphatidic Acid 分子名称: (2R)-3-(phosphonooxy)propane-1,2-diyl dihexanoate, 1,2-ETHANEDIOL, ACETATE ION, ... 著者 Kvansakul, M, Hulett, M.D, Lay, F.T. 登録日 2016-06-21 公開日 2016-10-05 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Binding of phosphatidic acid by NsD7 mediates the formation of helical defensin-lipid oligomeric assemblies and membrane permeabilization. Proc.Natl.Acad.Sci.USA, 113, 2016
6NW5	Crystal structure of TmPep1050 aminopeptidase with its metal cofactors 分子名称: Aminopeptidase, COBALT (II) ION, HYDROXIDE ION, ... 著者 Dutoit, R. 登録日 2019-02-06 公開日 2019-10-23 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 How metal cofactors drive dimer-dodecamer transition of the M42 aminopeptidase TmPep1050 ofThermotoga maritima. J.Biol.Chem., 294, 2019
7M8I	Human CYP11B2 and human adrenodoxin in complex with fadrozole 分子名称: 4-[(5R)-5,6,7,8-tetrahydroimidazo[1,5-a]pyridin-5-yl]benzonitrile, Adrenodoxin, Cytochrome P450 11B2, ... 著者 Scott, E.E, Brixius-Anderko, S. 登録日 2021-03-29 公開日 2021-05-26 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.94 Å) 主引用文献 Structural and functional insights into aldosterone synthase interaction with its redox partner protein adrenodoxin. J.Biol.Chem., 296, 2021
6RUS	Structure of a functional properdin monomer 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Properdin, SULFATE ION, ... 著者 Pedersen, D.V, Andersen, G.R. 登録日 2019-05-29 公開日 2019-08-21 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural Basis for Properdin Oligomerization and Convertase Stimulation in the Human Complement System. Front Immunol, 10, 2019

<812813814815816817818819820821822823824825826827>