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5N06
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Crystal structure of Tie1 Fibronectin-like domain 3
分子名称: Tyrosine-protein kinase receptor Tie-1
著者Leppanen, V.-M, Saharinen, P, Alitalo, K.
登録日2017-02-02
公開日2017-04-26
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.501 Å)
主引用文献Structural basis of Tie2 activation and Tie2/Tie1 heterodimerization.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
6NOR
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BU of 6nor by Molmil
Crystal structure of GenD2 from gentamicin A biosynthesis in complex with NAD
分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Putative NAD dependent dehydrogenase
著者Araujo, N.C, Bury, P.S, Huang, F, Leadlay, P.F, Dias, M.V.B.
登録日2019-01-16
公開日2019-05-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.402 Å)
主引用文献Crystal Structure of GenD2, an NAD-Dependent Oxidoreductase Involved in the Biosynthesis of Gentamicin.
Acs Chem.Biol., 14, 2019
7BT8
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Mevo lectin complex with mannotriose
分子名称: 1,2-ETHANEDIOL, GLYCEROL, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose, ...
著者Sivaji, N, Suguna, K, Surolia, A, Vijayan, M.
登録日2020-03-31
公開日2021-02-03
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural and related studies on Mevo lectin from Methanococcus voltae A3: the first thorough characterization of an archeal lectin and its interactions.
Glycobiology, 31, 2021
5N2D
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Structure of PD-L1/small-molecule inhibitor complex
分子名称: Programmed cell death 1 ligand 1, ~{N}-[2-[[2,6-dimethoxy-4-[(2-methyl-3-phenyl-phenyl)methoxy]phenyl]methylamino]ethyl]ethanamide
著者Guzik, K, Zak, K.M, Grudnik, P, Dubin, G, Holak, T.A.
登録日2017-02-07
公開日2017-06-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Small-Molecule Inhibitors of the Programmed Cell Death-1/Programmed Death-Ligand 1 (PD-1/PD-L1) Interaction via Transiently Induced Protein States and Dimerization of PD-L1.
J. Med. Chem., 60, 2017
5N2Z
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Thermolysin in complex with inhibitor JC286
分子名称: CALCIUM ION, DIMETHYL SULFOXIDE, Thermolysin, ...
著者Cramer, J, Krimmer, S.G, Heine, A, Klebe, G.
登録日2017-02-08
公開日2017-06-21
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.37 Å)
主引用文献Paying the Price of Desolvation in Solvent-Exposed Protein Pockets: Impact of Distal Solubilizing Groups on Affinity and Binding Thermodynamics in a Series of Thermolysin Inhibitors.
J. Med. Chem., 60, 2017
6HMU
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BU of 6hmu by Molmil
Ternary complex of Estrogen Receptor alpha peptide and 14-3-3 sigma C45 mutant bound to disulfide fragment PPI stabilizer 6
分子名称: 14-3-3 protein sigma, 2-(4-chloranylphenoxy)-2-methyl-~{N}-(3-sulfanylpropyl)propanamide, Estrogen receptor, ...
著者Sijbesma, E, Hallenbeck, K.K, Leysen, S, Arkin, M.R, Ottmann, C.
登録日2018-09-12
公開日2019-02-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Site-Directed Fragment-Based Screening for the Discovery of Protein-Protein Interaction Stabilizers.
J. Am. Chem. Soc., 141, 2019
8BYG
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fragment-linked stabilizer for ERa - 14-3-3 interaction (1047648)
分子名称: 14-3-3 protein sigma, ERalpha peptide, ~{N}-[2-[(2-carbamimidoyl-1-benzothiophen-4-yl)-methyl-amino]ethyl]-2-(4-chloranylphenoxy)-~{N},2-dimethyl-propanamide
著者Visser, E.J, Sijbesma, E, Ottmann, C.
登録日2022-12-12
公開日2023-08-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献From Tethered to Freestanding Stabilizers of 14-3-3 Protein-Protein Interactions through Fragment Linking.
Angew.Chem.Int.Ed.Engl., 62, 2023
6HY7
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Crystal structure of alpha9 nAChR extracellular domain in complex with alpha-conotoxin RgIA
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-conotoxin RgIA, ...
著者Giastas, P, Zouridakis, M.
登録日2018-10-19
公開日2019-05-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Crystal Structure of the Monomeric Extracellular Domain of alpha 9 Nicotinic Receptor Subunit in Complex With alpha-Conotoxin RgIA: Molecular Dynamics Insights Into RgIA Binding to alpha 9 alpha 10 Nicotinic Receptors.
Front Pharmacol, 10, 2019
5N7L
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BU of 5n7l by Molmil
Crystal structure of the periplasmic domain of XcpY, tI crystal form.
分子名称: BROMIDE ION, GLUTAMIC ACID, Type II secretion system protein L
著者Fulara, A, Savvides, S.N.
登録日2017-02-20
公開日2018-03-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.501 Å)
主引用文献Structure and oligomerization of the periplasmic domain of GspL from the type II secretion system of Pseudomonas aeruginosa.
Sci Rep, 8, 2018
5N3V
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Thermolysin in complex with inhibitor JC292
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, DIMETHYL SULFOXIDE, ...
著者Cramer, J, Krimmer, S.G, Heine, A, Klebe, G.
登録日2017-02-09
公開日2017-06-21
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.12 Å)
主引用文献Paying the Price of Desolvation in Solvent-Exposed Protein Pockets: Impact of Distal Solubilizing Groups on Affinity and Binding Thermodynamics in a Series of Thermolysin Inhibitors.
J. Med. Chem., 60, 2017
6WHB
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BU of 6whb by Molmil
MEKK1 TOG domain (548-867)
分子名称: ACETATE ION, GLYCEROL, Mitogen-activated protein kinase kinase kinase 1
著者Filipcik, P, Mace, P.D.
登録日2020-04-07
公開日2020-08-26
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.90032053 Å)
主引用文献A cryptic tubulin-binding domain links MEKK1 to curved tubulin protomers.
Proc.Natl.Acad.Sci.USA, 117, 2020
6NF6
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Structure of chicken Otop3 in nanodiscs
分子名称: CHOLESTEROL HEMISUCCINATE, Otopetrin3
著者Saotome, K, Lee, W.H, Liman, E.R, Ward, A.B.
登録日2018-12-18
公開日2019-06-05
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.32 Å)
主引用文献Structures of the otopetrin proton channels Otop1 and Otop3.
Nat.Struct.Mol.Biol., 26, 2019
6CRQ
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Glutaraldehyde-treated BG505 SOSIP.664 Env in complex with PGV04 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp160, ...
著者Pallesen, J, Ward, A.B.
登録日2018-03-19
公開日2018-04-18
最終更新日2022-03-16
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structural and immunologic correlates of chemically stabilized HIV-1 envelope glycoproteins.
PLoS Pathog., 14, 2018
8SL4
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Dimeric form of human adenylyl cyclase 5
分子名称: Adenylate cyclase type 5
著者Yen, Y.C, Tesmer, J.J.G.
登録日2023-04-20
公開日2024-04-03
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (7 Å)
主引用文献Structure of adenylyl cyclase 5 in complex with G beta gamma offers insights into ADCY5-related dyskinesia.
Nat.Struct.Mol.Biol., 2024
5J4E
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BU of 5j4e by Molmil
Crystal structures reveal signaling states of a short blue light photoreceptor protein PpSB1-LOV (Photoexcited state)
分子名称: FLAVIN MONONUCLEOTIDE, Sensory box protein
著者Granzin, J, Batra-Safferling, R.
登録日2016-04-01
公開日2016-06-22
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.67 Å)
主引用文献Signaling States of a Short Blue-Light Photoreceptor Protein PpSB1-LOV Revealed from Crystal Structures and Solution NMR Spectroscopy.
J.Mol.Biol., 428, 2016
6TQL
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Cryo-EM of elastase-treated human uromodulin (UMOD)/Tamm-Horsfall protein (THP) filament
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)]alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Stsiapanava, A, Xu, C, Carroni, M, Wu, B, Jovine, L.
登録日2019-12-16
公開日2020-11-04
最終更新日2021-03-03
実験手法ELECTRON MICROSCOPY (3.96 Å)
主引用文献Cryo-EM structure of native human uromodulin, a zona pellucida module polymer.
Embo J., 39, 2020
8SVG
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BU of 8svg by Molmil
Ubiquitin variant i53 in complex with 53BP1 Tudor domain
分子名称: Tumor protein p53 binding protein 1, Ubiquitin variant i53
著者Holden, J.K, Partridge, J.R, Wibowo, A.S, Mulichak, A.
登録日2023-05-16
公開日2024-03-27
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.21 Å)
主引用文献Functional screening in human HSPCs identifies optimized protein-based enhancers of Homology Directed Repair.
Nat Commun, 15, 2024
6WVT
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BU of 6wvt by Molmil
Structural basis of alphaE-catenin - F-actin catch bond behavior
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
著者Xu, X.P, Pokutta, S, Torres, M, Swift, M.F, Hanein, D, Volkmann, N, Weis, W.I.
登録日2020-05-06
公開日2020-10-07
実験手法ELECTRON MICROSCOPY (3.56 Å)
主引用文献Structural basis of alpha E-catenin-F-actin catch bond behavior.
Elife, 9, 2020
8SVH
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BU of 8svh by Molmil
Ubiquitin variant i53 mutant L67R bound to 53BP1 Tudor Domain
分子名称: Tumor protein p53 binding protein 1, Ubiquitin variant i53: mutant L67R
著者Holden, J.K, Partridge, J.R, Wibowo, A.S, Mulichak, A.
登録日2023-05-16
公開日2024-03-27
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.16 Å)
主引用文献Functional screening in human HSPCs identifies optimized protein-based enhancers of Homology Directed Repair.
Nat Commun, 15, 2024
6TU4
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Structure of Plasmodium Actin1 filament
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin-1, Jasplakinolide, ...
著者Vahokoski, J, Calder, L.J, Lopez, A.J, Rosenthal, P.B, Kursula, I.
登録日2020-01-02
公開日2021-01-13
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献High-resolution structures of malaria parasite actomyosin and actin filaments.
Plos Pathog., 18, 2022
8SL3
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BU of 8sl3 by Molmil
Human adenylyl Cyclase 5 in complex with Gbg
分子名称: Adenylate cyclase type 5, GERAN-8-YL GERAN, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
著者Yen, Y.C, Tesmer, J.J.G.
登録日2023-04-20
公開日2024-04-03
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (7 Å)
主引用文献Structure of adenylyl cyclase 5 in complex with G beta gamma offers insights into ADCY5-related dyskinesia.
Nat.Struct.Mol.Biol., 2024
7LQT
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Solution NMR structure of the PNUTS amino-terminal Domain fused to Myc Homology Box 0
分子名称: Serine/threonine-protein phosphatase 1 regulatory subunit 10,Myc proto-oncogene protein fusion
著者Lemak, A, Wei, Y, Duan, S, Houliston, S, Penn, L.Z, Arrowsmith, C.H.
登録日2021-02-15
公開日2021-03-03
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The MYC oncoprotein directly interacts with its chromatin cofactor PNUTS to recruit PP1 phosphatase.
Nucleic Acids Res., 50, 2022
8SVI
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BU of 8svi by Molmil
Ubiquitin variant i53:Mutant L67H with 53BP1 Tudor domain
分子名称: GLYCEROL, Tumor protein p53 binding protein 1, Ubiquitin Variant i53: Mutant L67H
著者Partridge, J.R, Holden, J.K, Wibowo, A.S, Mulichak, A.
登録日2023-05-16
公開日2024-03-27
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Functional screening in human HSPCs identifies optimized protein-based enhancers of Homology Directed Repair.
Nat Commun, 15, 2024
6HU7
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phosphorylated F97L Hepatitis B core protein capsid
分子名称: Capsid protein
著者Bottcher, B, Nassal, M.
登録日2018-10-05
公開日2018-12-26
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structure of Mutant Hepatitis B Core Protein Capsids with Premature Secretion Phenotype.
J. Mol. Biol., 430, 2018
8SVJ
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BU of 8svj by Molmil
Ubiquitin variant i53: mutant VHH with 53BP1 Tudor domain
分子名称: GLYCEROL, Tumor protein p53 binding protein 1, Ubiquitin varient i53 mutant VHH
著者Holden, J, Partridge, J.R, Wibowo, A.S, Mulichak, A.
登録日2023-05-16
公開日2024-03-27
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Functional screening in human HSPCs identifies optimized protein-based enhancers of Homology Directed Repair.
Nat Commun, 15, 2024

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